prot_H-paniculata_contig2057.5335.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2057.5335.1
Unique Nameprot_H-paniculata_contig2057.5335.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1503
Homology
BLAST of mRNA_H-paniculata_contig2057.5335.1 vs. uniprot
Match: A0A6H5KF78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF78_9PHAE)

HSP 1 Score: 313 bits (801), Expect = 5.240e-83
Identity = 266/590 (45.08%), Postives = 340/590 (57.63%), Query Frame = 0
Query:  452 LVAQQQIMTTPVRPVVMGVGSPLIMVTPSTSEKAGIRLHDQARETRERLERRRREGS--SPAVSADGLSPFTPRRWSNPNRGN-------PSVAGMERVERLYRDATERDIKLEMARREEDENPRNCTFTPKITTRASSRGRSEKRAQQDAGIGSEGAKAS--------------SSMSRFHALYLDAKRRRAKMEALTDARIVEVAGPGTPVITDLGHKHSTEPLDTRLRENGERWARRWKELEEKKVEQDVEGCTFKPSFSVGRSASAPRLGGRSSSGNGSGSSDSLND----EPFVVRAQRYLAAKEERLSELKREMEKKELAEATFQPKVSASFAAEANGASPEHGDGHARTKGRGGDSRDSGVFERLLRAAVEQEKHKAALKEEFLQKERAEFHDFQPRLRPRRSESPARPLDARLRESTEHWVQSREAREQQRLQQLADQCTFRPSVGTGSDGGRPRRSSSAGPRSRSSAAGRSGGIXXXXXXXXXXXXXXXXXXXXXXXVAAGASGGCRRSTGGFG------FEARSKAFQDAKEQRLNRLREEKVRHELKEATFTPIIGFGS-----------GGSLRKRDA 997
             V    ++ TP R V +        ++P+ +E +G RLH+QARE RERLERRR+E    +P     GL+ F+PRRWS P RG        P V+G +R+E LYRDA ER+ +LE+ARR E+E PR CTFTP+I    S RGRS  R     G G E                   S    F ALY DAKRR+AKMEAL  A   EV    +PVIT +G + +  P+D R++E+ ERW RR++ELEEKK E++ EGCTF P+FS+GRS+SAPR+  R S+G               E FV R+  +L A+E  + +LK E E++E A ATF+P +            P  G   A       D     VFERLLRAA  QE +KAALKEEFL+KER +++DF+PRL  R+ ++P  PLDAR+R STE WV+++  REQ+RL+  A+ CTFRPS+G G            G              XXXXXXXXXXXXXXXXXXXXXXX  +      RR++GG G      F AR  AFQDAK+QRL  LR+EK + EL+EATF P+IG  +           GGS R  DA
Sbjct:  706 FVMSSPLLFTPTRGVAL-------TLSPALAEASGNRLHEQAREARERLERRRKEVPVVTPLAPMPGLTSFSPRRWSAP-RGPAGGAGAAPVVSGPDRLEGLYRDAIERNSRLELARRAEEERPRECTFTPEI----SKRGRSLVRGYSSDGGGGEXXXXXXXXXXXXXXXXXXXSLFDTFDALYQDAKRRQAKMEALKGAH-EEVGRRTSPVITAMGRQATGVPIDVRMKEDAERWVRRFQELEEKKAEKEKEGCTFMPNFSIGRSSSAPRMRPRRSNGXXXXXXXXXXXXXXIEAFVARSAIFLEARERNMKKLKEEAEERERALATFKPSIL-----------PWGGRSAADDASAAAD-----VFERLLRAAENQEMNKAALKEEFLKKEREQYNDFEPRLPTRQKDAPMEPLDARIRRSTEEWVKNKALREQRRLELEAEHCTFRPSLGGG------------GIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTRQRASRRASGGVGPAAAAAFAAREAAFQDAKKQRLEALRKEKEQLELQEATFQPVIGAEARRAGDRGGDPVGGSSRGTDA 1254          
BLAST of mRNA_H-paniculata_contig2057.5335.1 vs. uniprot
Match: D8LNB8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNB8_ECTSI)

HSP 1 Score: 281 bits (720), Expect = 3.360e-73
Identity = 247/583 (42.37%), Postives = 324/583 (55.57%), Query Frame = 0
Query:  452 LVAQQQIMTTPVRPVVMGVGSPLIMVTPSTSEKAGIRLHDQARETRERLERRRREGS--SPAVSADGLSPFTPRRWSNPNRGN-------PSVAGMERVERLYRDATERDIKLEMARREEDENPRNCTFTPKITTRASSRGRSEKRAQQDAGIGSEGAKASSS----------------------MSRFHALYLDAKRRRAKMEALTDARIVEVAGPGTPVITDLGHKHSTEPLDTRLRENGERWARRWKELEEKKVEQDVEGCTFKPSFSVGRSASAPRLGGRSSSGNGSGSSDSLNDEPFVVRAQRYLAAKEERLSELKREMEKKELAEATFQPKVSASFAAEANGASPEHGDGHARTKGRGGDSRDSGVFERLLRAAVEQEKHKAALKEEFLQKERAEFHDFQPRLRPRRSESPARPLDARLRESTEHWVQSREAREQQRLQQLADQCTFRPSVGTGSDGGRPRRSSSAGPRSRSSAAGRSGGIXXXXXXXXXXXXXXXXXXXXXXXVAAGASGGCRRSTGGFG------FEARSKAFQDAKEQRLNRLREEKVRHELKEATFTPIIGF------GSGGS 991
             V    ++ TP R V        + ++P+++E +G RLH+QARE          E    +P     G + F+PRRWS P RG        P V+G++R+E LYRDA ER+ +LE+ARR E+E PR CTFTP+I    S RGRS  R     G                                    F ALY DAKRR+AKMEAL      EV    +PVIT +G + +  P+D R++E+ ERW RR++ELEEKK E++ EGCTF P+FS+GRS+SAPR+  R S+            E FV R+  +L  +E  + +LK+E E++E A ATF+P +            P  G   A       D     VFERLLRAA  QE +KAALKEEFL+KER + +DF+PRL  R+ ++P  PLDAR+R+STE WV+++  REQ+RL+  A+ CTFRPS+G G                           XXXXXXXXXXXXXXXXXXXXXXX ++      RR++GG G      F AR  AFQDAK+QRL  LR+EK + E++EATF P+IG       G GGS
Sbjct:  696 FVMSSPLLFTPTRGVA-------VTLSPASAEASGNRLHEQAREAXXXXXXXXXEVPVVTPLAPMPGFTSFSPRRWSAP-RGPAGGAGAAPVVSGLDRLEGLYRDAIERNSRLELARRAEEEKPRECTFTPEI----SKRGRSLVRGYSGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFDTFDALYQDAKRRQAKMEALKAHE--EVGTRTSPVITAMGRQATGVPVDVRMKEDAERWVRRFQELEEKKAEKEKEGCTFMPNFSIGRSSSAPRMRPRRSNXXXXXXXXXXGIEAFVARSAIFLETRERNMEKLKQEAEERERALATFKPSIL-----------PWGGGSAADDASSAAD-----VFERLLRAAENQEMNKAALKEEFLKKEREQNNDFEPRLPTRQKDAPLEPLDARIRKSTEEWVKNKALREQRRLELEAEHCTFRPSLGGGXXXXXXXX------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSTRQRASRRASGGVGPAAATAFAAREAAFQDAKKQRLEALRKEKEQLEVQEATFQPVIGAEARRASGRGGS 1236          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2057.5335.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KF78_9PHAE5.240e-8345.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNB8_ECTSI3.360e-7342.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 793..813
NoneNo IPR availableCOILSCoilCoilcoord: 100..120
NoneNo IPR availableCOILSCoilCoilcoord: 723..750
NoneNo IPR availableCOILSCoilCoilcoord: 956..976
NoneNo IPR availablePANTHERPTHR37028:SF4coord: 340..691
coord: 647..762
NoneNo IPR availablePANTHERPTHR37028FAMILY NOT NAMEDcoord: 340..691
coord: 647..762
NoneNo IPR availablePANTHERPTHR37028:SF4coord: 787..1069
NoneNo IPR availablePANTHERPTHR37028FAMILY NOT NAMEDcoord: 787..1069

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2057contigH-paniculata_contig2057:2474..19214 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2057.5335.1mRNA_H-paniculata_contig2057.5335.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2057 1530..19991 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2057.5335.1 ID=prot_H-paniculata_contig2057.5335.1|Name=mRNA_H-paniculata_contig2057.5335.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1503bp
MEQSTAEEKIASIKQQFDSIDSFPDDAPAGNGSSNGASNGSENDGASSSK
NELASSPAGDGEELIFAPEFKTGKIEAMKRQLSSKLEITTADEEAGGDGA
ASATEESQLLQQQQQQQQQQEGEFIAPEFEKGKVSAMKGKLVSEGHVAGG
SNNGSFVAPELEEGKIKAMKTELSEKGLDLDPATAVVAIAAAAAAAEESA
SSNAPLDLDAVGDAVITEAESGALIPSIVGVATPAQTTAQASLDVPIPAA
AEGGDTSVVVAAAIATNGNGSLPSRTDPEPGPAQASVKAPRRSSPLSTRR
RPVSRDRDSAAQSRTRRASSNGDATRPGSSGRRTPSPAVTRKVENRPRGR
QSTPNGPTAPTAYSSSGRGYAGSSALAARARRQSAEMSGVQGSRTEDTNP
VSQRASSAVSSVSRAVVMSPGYATESTSGAGSEGGIAPHRRSSTPAEARG
SLVAQQQIMTTPVRPVVMGVGSPLIMVTPSTSEKAGIRLHDQARETRERL
ERRRREGSSPAVSADGLSPFTPRRWSNPNRGNPSVAGMERVERLYRDATE
RDIKLEMARREEDENPRNCTFTPKITTRASSRGRSEKRAQQDAGIGSEGA
KASSSMSRFHALYLDAKRRRAKMEALTDARIVEVAGPGTPVITDLGHKHS
TEPLDTRLRENGERWARRWKELEEKKVEQDVEGCTFKPSFSVGRSASAPR
LGGRSSSGNGSGSSDSLNDEPFVVRAQRYLAAKEERLSELKREMEKKELA
EATFQPKVSASFAAEANGASPEHGDGHARTKGRGGDSRDSGVFERLLRAA
VEQEKHKAALKEEFLQKERAEFHDFQPRLRPRRSESPARPLDARLRESTE
HWVQSREAREQQRLQQLADQCTFRPSVGTGSDGGRPRRSSSAGPRSRSSA
AGRSGGIGGAAGAAAAAAAAGAVAASYASTVAAGASGGCRRSTGGFGFEA
RSKAFQDAKEQRLNRLREEKVRHELKEATFTPIIGFGSGGSLRKRDAAAA
VAAAAAAVVPVLGLGAVPGATAEGASAQAVDRSAAEKRASSVSSGDLGMA
QKKEAPSKANDGPVSFKPQADGYPSAASPQRGVNPLVKPNSQRCAASKEP
AAARIRSGVGQHEPSGRTKSGHGHGNGNGKGSRIDEENAAAAAAVAAKAR
VKEGIVEATGARQGATSTTIEVEVGDAKKKGDSGVDVKELSARLQQLAEG
SCFSGTGTEPGGENEQEKTPPNIEDAFPAVTNPIHTKAQQPQQQEEKAQP
KILKTTGDFPPSLPAAAAAAVLPEQIPSSSSPPLLSPIAAVRSLMSTPSE
GAGDVVGRSGLVLGLEKVAQSGEPAKVVAKRQEEGEEEDVEADAKARQDD
DDAQIQQQIRAAELDAAARASPGAEDSEAESVPEQLSVERILIEYEEGGY
EGSSNDNQEDSDEAQEEAGDEEETGEGQEKEHDIVLEEDESNSVDDEDDD
DEYYGHEDDDSDDEDYDYPNAAHSERLHDQATRSLEDFDQVQREIEAKLR
AL*
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