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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal peptide |
| Exons | 2 |
| Model size | 1061 |
| Cds size | 1059 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig20552.5328.1 >prot_H-paniculata_contig20552.5328.1 ID=prot_H-paniculata_contig20552.5328.1|Name=mRNA_H-paniculata_contig20552.5328.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=353bp
ATVFAIFIVGFCATIGIEPPSGRHGAGYIPGSRSTSQVSLAPGGAASVLP
EEAPAPAGSAPPPATRTAGLAAKRAKTDGVASATVAAAAGVTAIETRRRS
SGELMFGAARPGPEVPTTEFPPTPITGKSDIPEFPAPDDDGASGEGDANG
GGGGGGFTSATKIVEASDDAGADTVVASSSSFSSSPSSPPSSSSEEKLAV
TFVDTSAGAGAGVEAAAAAAADAGNVGDATEEGLVSVVAQGPLKEYATAA
ATVQEAAAATIAVEIAVGDAAEDERRAATPTAEKFPLAEAVDDKQSEGIE
IAAPVANDSNGVMGLEGAKNDGAVSTLPAAAAVCAMEKQDSTANDMHAAK
NAM back to topmRNA from alignment at H-paniculata_contig20552:1847..3669+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig20552.5328.1 ID=mRNA_H-paniculata_contig20552.5328.1|Name=mRNA_H-paniculata_contig20552.5328.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1823bp|location=Sequence derived from alignment at H-paniculata_contig20552:1847..3669+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCTACGGTATTCGCCATCTTCATTGTAGGTTTCTGCGCGACAATCGGCAT
AGAACCGCCCTCTGGAAGGCATGGAGCGGGGTATATTCCGGGCAGGTGAG
CAAGCGTCGTGGATCATGCTCGGCGCGAGCGCGCGCGCATACACACGGCG
GCTGAACTGCGGTCGGTGTTGACAATCGCAACCAGCGTACCCAATACATG
ACGTAAATTATATATTTCAAATAAGTAGTTTGGAAGATGAACTGATTTCC
CCCTAATACATTATTTTACTGATTGAAAAAATATTGAAAAAGCTTGAATA
CTAAATACGGTATAAAATAAGATGATGAGCAAAACGCACAAATGAAAAAA
AGAAGCCGTACCCTGTAGTGTGTCGTGAGGTCAAAATGGTTAGTATTTCT
GCTGGTGGCACTCCATATTTCACAACTCGGATAAAGGTAGTAGCCTTCAT
CGACCGATGGCGATCTGAACGACAGTTAACCATGAAAAGGCCGAAAATTC
GATAAAGGTGGAAGTTTTGATGAAAAAGATGGAAGGTTCCAAGGACAGAT
AAAAATGTTGCCGAGAATATGCATGAAAATATGAAGATAAGCTCACTATG
AAACCGAAAAAAATTGGTCAAGGTCTTAAAGGTCAGCTAATCATGAACTT
CGATTTAGGCGTGGAAAGTATAGCTGGGCCTTTACCTCTCCTTCGTCCGA
GAAGCGTTCGAAGTTCTCTCACGGGATCGCAGCGTTTTTGTCGGAAGTAC
TTGGTATATTCTCACAGTACAACACCTCCCGACATCCACTACCGATGACC
CCGCCCGCCTGCCTGCTGCTGCCCCCGCCGCCACCGCCGCCACGATGACA
CGCTCGCAGCCGCAGTACATCTCAGGTGTCACTCGCTCCCGGTGGTGCTG
CGTCAGTGTTGCCGGAGGAGGCACCGGCCCCGGCAGGCTCCGCGCCGCCA
CCAGCAACCCGGACAGCAGGCCTCGCGGCAAAACGTGCAAAGACTGACGG
CGTCGCATCTGCGACGGTGGCGGCGGCGGCGGGAGTAACCGCCATCGAAA
CTAGGCGGAGGAGCTCGGGGGAATTGATGTTTGGCGCCGCTAGACCGGGG
CCTGAAGTGCCGACGACGGAATTTCCGCCAACCCCCATAACTGGTAAAAG
CGACATTCCCGAATTTCCCGCGCCTGATGATGATGGTGCCAGTGGGGAGG
GGGATGCGAATGGTGGTGGTGGTGGTGGTGGTTTTACATCCGCAACGAAG
ATTGTGGAAGCGTCGGATGATGCAGGAGCCGATACAGTAGTGGCGTCTTC
TTCCTCCTTTTCTTCTTCCCCCTCTTCTCCTCCCAGTTCTTCTTCGGAGG
AGAAACTAGCGGTAACGTTCGTCGACACGTCGGCGGGGGCAGGGGCGGGG
GTAGAGGCAGCGGCGGCGGCGGCGGCGGATGCAGGAAATGTAGGAGATGC
TACTGAAGAAGGACTTGTGTCTGTTGTTGCACAAGGCCCACTCAAGGAAT
ACGCGACTGCAGCGGCGACGGTACAGGAGGCGGCCGCTGCCACCATTGCT
GTTGAAATTGCCGTCGGTGATGCCGCTGAAGACGAGCGTAGAGCGGCTAC
CCCCACTGCGGAGAAGTTTCCGTTGGCGGAAGCTGTTGATGACAAACAAT
CGGAGGGTATTGAGATTGCCGCGCCCGTCGCCAACGATTCGAACGGGGTC
ATGGGGTTGGAAGGTGCTAAAAACGATGGCGCCGTGTCTACTCTGCCCGC
CGCCGCCGCTGTGTGTGCCATGGAGAAGCAGGATAGTACAGCAAACGACA
TGCACGCGGCGAAAAATGCAATG back to topCoding sequence (CDS) from alignment at H-paniculata_contig20552:1847..3669+ >mRNA_H-paniculata_contig20552.5328.1 ID=mRNA_H-paniculata_contig20552.5328.1|Name=mRNA_H-paniculata_contig20552.5328.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2118bp|location=Sequence derived from alignment at H-paniculata_contig20552:1847..3669+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCTACGGTATTCGCCATCTTCATTGTAGGTTTCTGCGCGACAATCGGCAT
AGAACCGCCCTCTGGAAGGCATGGAGCGGGGTATATTCCGGGCAGGCTAC
GGTATTCGCCATCTTCATTGTAGGTTTCTGCGCGACAATCGGCATAGAAC
CGCCCTCTGGAAGGCATGGAGCGGGGTATATTCCGGGCAGCCGCAGTACA
TCTCAGGTGTCACTCGCTCCCGGTGGTGCTGCGTCAGTGTTGCCGGAGGA
GGCACCGGCCCCGGCAGGCTCCGCGCCGCCACCAGCAACCCGGACAGCAG
GCCTCGCGGCAAAACGTGCAAAGACTGACGGCGTCGCATCTGCGACGGTG
GCGGCGGCGGCGGGAGTAACCGCCATCGAAACTAGGCGGAGGAGCTCGGG
GGAATTGATGTTTGGCGCCGCTAGACCGGGGCCTGAAGTGCCGACGACGG
AATTTCCGCCAACCCCCATAACTGGTAAAAGCGACATTCCCGAATTTCCC
GCGCCTGATGATGATGGTGCCAGTGGGGAGGGGGATGCGAATGGTGGTGG
TGGTGGTGGTGGTTTTACATCCGCAACGAAGATTGTGGAAGCGTCGGATG
ATGCAGGAGCCGATACAGTAGTGGCGTCTTCTTCCTCCTTTTCTTCTTCC
CCCTCTTCTCCTCCCAGTTCTTCTTCGGAGGAGAAACTAGCGGTAACGTT
CGTCGACACGTCGGCGGGGGCAGGGGCGGGGGTAGAGGCAGCGGCGGCGG
CGGCGGCGGATGCAGGAAATGTAGGAGATGCTACTGAAGAAGGACTTGTG
TCTGTTGTTGCACAAGGCCCACTCAAGGAATACGCGACTGCAGCGGCGAC
GGTACAGGAGGCGGCCGCTGCCACCATTGCTGTTGAAATTGCCGTCGGTG
ATGCCGCTGAAGACGAGCGTAGAGCGGCTACCCCCACTGCGGAGAAGTTT
CCGTTGGCGGAAGCTGTTGATGACAAACAATCGGAGGGTATTGAGATTGC
CGCGCCCGTCGCCAACGATTCGAACGGGGTCATGGGGTTGGAAGGTGCTA
AAAACGATGGCGCCGTGTCTACTCTGCCCGCCGCCGCCGCTGTGTGTGCC
ATGGAGAAGCAGGATAGTACAGCAAACGACATGCACGCGGCGAAAAATGC
AATGCCGCAGTACATCTCAGGTGTCACTCGCTCCCGGTGGTGCTGCGTCA
GTGTTGCCGGAGGAGGCACCGGCCCCGGCAGGCTCCGCGCCGCCACCAGC
AACCCGGACAGCAGGCCTCGCGGCAAAACGTGCAAAGACTGACGGCGTCG
CATCTGCGACGGTGGCGGCGGCGGCGGGAGTAACCGCCATCGAAACTAGG
CGGAGGAGCTCGGGGGAATTGATGTTTGGCGCCGCTAGACCGGGGCCTGA
AGTGCCGACGACGGAATTTCCGCCAACCCCCATAACTGGTAAAAGCGACA
TTCCCGAATTTCCCGCGCCTGATGATGATGGTGCCAGTGGGGAGGGGGAT
GCGAATGGTGGTGGTGGTGGTGGTGGTTTTACATCCGCAACGAAGATTGT
GGAAGCGTCGGATGATGCAGGAGCCGATACAGTAGTGGCGTCTTCTTCCT
CCTTTTCTTCTTCCCCCTCTTCTCCTCCCAGTTCTTCTTCGGAGGAGAAA
CTAGCGGTAACGTTCGTCGACACGTCGGCGGGGGCAGGGGCGGGGGTAGA
GGCAGCGGCGGCGGCGGCGGCGGATGCAGGAAATGTAGGAGATGCTACTG
AAGAAGGACTTGTGTCTGTTGTTGCACAAGGCCCACTCAAGGAATACGCG
ACTGCAGCGGCGACGGTACAGGAGGCGGCCGCTGCCACCATTGCTGTTGA
AATTGCCGTCGGTGATGCCGCTGAAGACGAGCGTAGAGCGGCTACCCCCA
CTGCGGAGAAGTTTCCGTTGGCGGAAGCTGTTGATGACAAACAATCGGAG
GGTATTGAGATTGCCGCGCCCGTCGCCAACGATTCGAACGGGGTCATGGG
GTTGGAAGGTGCTAAAAACGATGGCGCCGTGTCTACTCTGCCCGCCGCCG
CCGCTGTGTGTGCCATGGAGAAGCAGGATAGTACAGCAAACGACATGCAC
GCGGCGAAAAATGCAATG back to top
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