prot_H-paniculata_contig2054.5325.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2054.5325.1
Unique Nameprot_H-paniculata_contig2054.5325.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1189
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2054.5325.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainSMARTSM00066gal4_2coord: 514..561
e-value: 6.1E-6
score: 35.7
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS00463ZN2_CY6_FUNGAL_1coord: 519..550
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 519..552
score: 9.424
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 511..573
e-value: 1.3E-5
score: 27.0
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 512..557

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2054contigH-paniculata_contig2054:11814..21175 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2054.5325.1mRNA_H-paniculata_contig2054.5325.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2054 9010..22158 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2054.5325.1 ID=prot_H-paniculata_contig2054.5325.1|Name=mRNA_H-paniculata_contig2054.5325.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1189bp
MAYSRGGSRRDKSHSTEEDRSLAKGRARELSAVKRRRISQRLRGDPPDFE
AGPANVQRDDEQNGECRSLADGSPVNHDGCSIDDSGLQKRDTRPSFAPPG
NESSVARGSPSVPTSAVENAIRQMTLIQKGDIRPSLPSLENKNFVASVSS
SVPMPATDTVIAQKTETQKNCTSHSLAPPGKESFVASAFPAIPTPAAETA
IAQTTEIDKSDARDSLAPPGKESFVASASLAVPPSAVETVVAETTNTQKS
DISPSVASPRKDSFTANASLSVPTPAVKTALAQTMEAQKSDVSPSIALLD
KKSFVAIASQAAAKLAAVPMVAQTTKAQKKDTGPSVASPGMESFIANACL
VVPTPAVEPVMTQTTDTHKSNACSSVISPDKEKVVASLSLAVPTPAAEAV
ITETTVTQKSDASPSVASPGKESFVANASLAVPTPAVEPVIMKTTDTHKS
DASPSVAPLTAPVLVSSSTPSKSSSTSRKQDQPMLSTSSSYASSPSPSMG
KDVWTPLKDARPNKKTRRTCNNCKSKKVRCTGGEPGVRKCGLCERKKGNC
VFDIKAKPGPKPGQKHTKRFDGVAATPSSEGGGTGRLVGGSTPLNLDAQP
ATVASIHLAPSCPSGTQEGPSSYGIWTGAGRILSGSTPLEVGVQPGAVNG
IHLASSSPSTAQHGAPSSNEVSTGMGRTLGGSTPSKLYIQPATADGIHVA
FSPSAAQEEVPSSNGVSTGTGRLLGGSMPPKLSVQLTTADGIHVAFSSPS
AAQEEAPSSNGVSTGTGRLLGGSTPPMPSVQPATADGIRVASSSPSATQQ
EGPSSDGASTGTGRLLGGSTPLKLGVQLAIADGIHVASSAPSMAQQEAHS
FSGVSTRTGRPLVGSTSLKPDVPPATTNGTHTASPGPSMAQEEGSASAAI
SSMENNGWGFTEYSSDSDTSSDEFIACIDDRPSSGSVASSTFPPVPTPAS
EIAIAQTSSTQRDDTRPSPAPFPAPALSSSSSSPPRSYNTSQKHYQPASS
TRSINARRRRLMSAPTLLQSQRFEESFDVISTPPRAESAAAVPLVRTCAT
RENYARSSNSDRRSRANDEVGSSSSCARVYPDLQNLHPQELRQPRICWTK
AKMVCSVVDGSCSCCPESMLLGIKYNFFTERTPKRQSNHRSITKKQPAAS
HCRPKRKKFVDTRRMETEANRSPARLDSYKNPPRGAQS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001138Zn2-C6_fun-type_DNA-bd
IPR036864Zn2-C6_fun-type_DNA-bd_sf