mRNA_H-paniculata_contig20530.5324.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig20530.5324.1
Unique NamemRNA_H-paniculata_contig20530.5324.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig20530.5324.1 vs. uniprot
Match: A0A6H5JU13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU13_9PHAE)

HSP 1 Score: 210 bits (534), Expect = 8.170e-63
Identity = 101/143 (70.63%), Postives = 121/143 (84.62%), Query Frame = 1
Query:    1 GKTLTFEIQGPEPGAEVRKVELDRTFPAVQDPIVYALKDQGQHKVGYVRVREFNSIVTNRLTDALEEMKAGGADEFVLDLRGNGGGAFQSALGIAGLFMENKPITYVVDGSGERAEFKTKTGALVPDAPLVVWVDGMSASASE 429
            GKT+TFE++ PE G++ R VELDRTFP+ ++P+ Y +K QG+HKVGY R+R+FNSIV N L DAL EMKA GADEFVLDLRGNGGGAFQSALG+AGLFM+ +PITYVVDGSG+RAEF TK   +V + PLVVWVDG SAS+SE
Sbjct:  292 GKTVTFELRSPEAGSKTRSVELDRTFPSTENPVAYRVKSQGEHKVGYARLRDFNSIVANSLRDALVEMKAEGADEFVLDLRGNGGGAFQSALGVAGLFMDAEPITYVVDGSGQRAEFMTKKDGVVTEEPLVVWVDGGSASSSE 434          
BLAST of mRNA_H-paniculata_contig20530.5324.1 vs. uniprot
Match: D8LLB8_ECTSI (TSPc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLB8_ECTSI)

HSP 1 Score: 209 bits (532), Expect = 5.870e-60
Identity = 101/143 (70.63%), Postives = 120/143 (83.92%), Query Frame = 1
Query:    1 GKTLTFEIQGPEPGAEVRKVELDRTFPAVQDPIVYALKDQGQHKVGYVRVREFNSIVTNRLTDALEEMKAGGADEFVLDLRGNGGGAFQSALGIAGLFMENKPITYVVDGSGERAEFKTKTGALVPDAPLVVWVDGMSASASE 429
            GKT+ FE++ PE G++ R VELDRTFP+ ++P+ Y +K QG+HKVGY R+R+FNSIV N L DAL EMKA GADEFVLDLRGNGGGAFQSALG+AGLFM+ KPITYVVDGSG+RAEF TK   +V + PLVVWVDG SAS+SE
Sbjct: 1159 GKTVMFELRSPEAGSKTRSVELDRTFPSTENPVAYRVKSQGEHKVGYARLRDFNSIVANSLKDALVEMKAEGADEFVLDLRGNGGGAFQSALGVAGLFMDAKPITYVVDGSGQRAEFMTKKDGVVTEEPLVVWVDGGSASSSE 1301          
BLAST of mRNA_H-paniculata_contig20530.5324.1 vs. uniprot
Match: A0A835YMM1_9STRA (ClpP/crotonase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMM1_9STRA)

HSP 1 Score: 148 bits (373), Expect = 2.580e-40
Identity = 77/137 (56.20%), Postives = 99/137 (72.26%), Query Frame = 1
Query:    7 TLTFEIQGPEPGAEVRKVELDRTFPAVQDPIVYALKDQGQHKVGYVRVREFNSIVTNRLTDALEEMKAGGADEFVLDLRGNGGGAFQSALGIAGLFMENKPITYVVDGSGERAEFKTKTGALVPDAPLVVWVDGMSA 417
            T+TF I  P+ G+E R VEL R+F  V DP            VGY+R++EFN++V +++ +AL +++A GADE++LDLRGNGGGAFQSALGIA LFMEN PITYVVDG G++  F TKT A+   APLVVW+D  SA
Sbjct:  161 TITFTITKPDGGSE-RVVELQRSFQKVSDP------------VGYMRIKEFNAVVVDKVREALVDLQAQGADEYILDLRGNGGGAFQSALGIASLFMENAPITYVVDGDGKKVGFNTKTDAVNTSAPLVVWIDRKSA 284          
BLAST of mRNA_H-paniculata_contig20530.5324.1 vs. uniprot
Match: A0A7S3XXB5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXB5_HETAK)

HSP 1 Score: 139 bits (349), Expect = 5.200e-37
Identity = 71/142 (50.00%), Postives = 100/142 (70.42%), Query Frame = 1
Query:    7 TLTFEIQGPEPGAEVRKVELDRTFPAVQDPIVYAL-KDQGQHKVGYVRVREFNSIVTNRLTDALEEMKAGGADEFVLDLRGNGGGAFQSALGIAGLFMENKPITYVVDGSGERAEFKTKTGALVPDAPLVVWVDGMSASASE 429
            T+ FE++ P+  A  ++  LDR F  + +P+ Y L K++    VGY++++EFNS+    + DAL ++++ GAD +VLDLRGNGGGAFQ A+GI+GLFM+ +PI  +VDG G R  FKT    +V D PLV+WVDG SASASE
Sbjct:  104 TIRFEVRKPDQ-ATSKEYVLDRKFEQIVNPVFYFLEKEKDGSSVGYIKLKEFNSLAKQSVKDALVDLESKGADRYVLDLRGNGGGAFQGAIGISGLFMKEQPIVSIVDGYGGRESFKTLPDQVVTDKPLVLWVDGGSASASE 244          
BLAST of mRNA_H-paniculata_contig20530.5324.1 vs. uniprot
Match: B7G1X7_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G1X7_PHATC)

HSP 1 Score: 128 bits (321), Expect = 5.440e-33
Identity = 70/130 (53.85%), Postives = 88/130 (67.69%), Query Frame = 1
Query:   52 RKVELDRTFPAVQDPIVYALKDQGQH--KVGYVRVREFNSIVTNRLTDALEEMKAGGADEFVLDLRGNGGGAFQSALGIAGLFMENKPITYVVDGSGERAEFKTKTGALV--PDAPLVVWVDGMSASASE 429
            R V +DR F  ++DPI Y + +      KVGY+R+ EFNS+V  RL DAL ++KA GA+ FVLDLR N GGAFQSA+ I+ LF+EN+  TYVVD       F+T  G L   P  P+VVW+DGMSASASE
Sbjct:  165 RVVVMDRLFQEIKDPIRYKITETRADGTKVGYIRIAEFNSLVKARLEDALRDLKADGANAFVLDLRMNTGGAFQSAVEISSLFIENRVATYVVDSGNVELPFRTTPGRLAIDPTVPMVVWIDGMSASASE 294          
BLAST of mRNA_H-paniculata_contig20530.5324.1 vs. uniprot
Match: A0A7S2XWX3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWX3_9STRA)

HSP 1 Score: 126 bits (317), Expect = 1.910e-31
Identity = 64/143 (44.76%), Postives = 100/143 (69.93%), Query Frame = 1
Query:    4 KTLTFEIQGPEPGAEVRKVELDRTFPAVQDPIVYAL-KDQGQHKVGYVRVREFNSIVTNRLTDALEEMKAGGADEFVLDLRGNGGGAFQSALGIAGLFMENKPITYVVDGSGERAEFKTKTGALVPDAPLVVWVDGMSASASE 429
            KT+ F I+    G  V++  L+RTF  V +P+ Y++ +D+ + K+GY+R++EFNS+    + +A+E+++  GA   VLDLRGN GGAFQSA+G+A LFM+NKP+  +VD  G ++ F + +  +V D+PLV+ +D  SASASE
Sbjct:  284 KTMRFGIKKAS-GGPVKEYTLERTFNKVSNPVSYSMSEDRQKRKIGYIRLKEFNSVGKQNVREAIEDLEQQGAKYLVLDLRGNPGGAFQSAIGMASLFMDNKPVVNIVDSDGGKSPFPSASNQVVTDSPLVLLMDAGSASASE 425          
BLAST of mRNA_H-paniculata_contig20530.5324.1 vs. uniprot
Match: A0A7S4R018_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R018_9STRA)

HSP 1 Score: 125 bits (314), Expect = 8.740e-31
Identity = 69/152 (45.39%), Postives = 97/152 (63.82%), Query Frame = 1
Query:    7 TLTFEIQGPEP---GAEVRKVELDRTFPAVQDPIVYALKDQGQ------HKVGYVRVREFNSIVTNRLTDALEEMKAGGADEFVLDLRGNGGGAFQSALGIAGLFMENKPITYVVDGSGERAEFKTKTGALVPDA--PLVVWVDGMSASASE 429
            T+T   +GP+       VR ++LDR F  + +PI Y + ++        HKVGY++++EFNS+V   L DA  ++++   D +VLDLRGN GGAFQSA+ I+ LF EN+  TYVVD +G    FKT  G +V D   P+V+WVDG SASA+E
Sbjct:  353 TMTVLTEGPDDLKGEGYVRDLKLDRQFEQIVNPITYKVSEERSSASSAVHKVGYIQIKEFNSLVERGLRDAFIDLESQNVDAYVLDLRGNPGGAFQSAVEISSLFFENQIATYVVDSNGVELPFKTAKGKVVVDRNDPVVIWVDGRSASATE 504          
BLAST of mRNA_H-paniculata_contig20530.5324.1 vs. uniprot
Match: A0A7S1ZFG3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZFG3_TRICV)

HSP 1 Score: 120 bits (300), Expect = 3.690e-29
Identity = 69/148 (46.62%), Postives = 95/148 (64.19%), Query Frame = 1
Query:    7 TLTFEIQGPEPGAE---VRKVELDRTFPAVQDPIVYALKDQGQHK--VGYVRVREFNSIVTNRLTDALEEMKAGGADEFVLDLRGNGGGAFQSALGIAGLFMENKPITYVVDGSGERAEFKTKTGALVPDA--PLVVWVDGMSASASE 429
            T+T    GP+  A    VR + L R F  ++DP+ Y + ++      VGYVR  EFNS+V  RL +A+ ++++ GA+  VLD+RGN GGAFQSA+ IAGLF+++   T VVDG+G    F+T  G +V D   P+ VWVDG SASASE
Sbjct:  246 TMTVRTVGPDDLANEGYVRDLALKREFREIKDPVSYRIAERRSDGTVVGYVRASEFNSLVKPRLEEAIRDLESRGANALVLDVRGNPGGAFQSAVEIAGLFVDDALATSVVDGNGVELPFRTSKGRVVADKSHPMAVWVDGRSASASE 393          
BLAST of mRNA_H-paniculata_contig20530.5324.1 vs. uniprot
Match: B8BRY2_THAPS (Carboxyl-terminal protease (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BRY2_THAPS)

HSP 1 Score: 118 bits (296), Expect = 4.550e-29
Identity = 71/145 (48.97%), Postives = 93/145 (64.14%), Query Frame = 1
Query:    7 TLTFEIQGPEPGAEVRKVELDRTFPAVQDPIVYALKDQGQH--KVGYVRVREFNSIVTNRLTDALEEMKAGGADEFVLDLRGNGGGAFQSALGIAGLFMENKPITYVVDGSGERAEFKTKTGALV--PDAPLVVWVDGMSASASE 429
            T T + QG +     R V + R F  V+DPI Y + +      KVGYVR+ EFNSIV  +L  AL ++++   + +VLD+RGN GGAFQSA+ IAGLFM+NK  T VVDG+G   +F+T    +V  P   LV+WVDG SASASE
Sbjct:  152 TFTIKSQGEDTS---RDVTMKREFLEVRDPISYRVTETRADGTKVGYVRIAEFNSIVKPKLEAALRDLESQNVNAYVLDVRGNPGGAFQSAVEIAGLFMDNKLATDVVDGNGVDLKFRTSKDRVVIDPTDTLVIWVDGRSASASE 293          
BLAST of mRNA_H-paniculata_contig20530.5324.1 vs. uniprot
Match: K0SEE0_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SEE0_THAOC)

HSP 1 Score: 119 bits (298), Expect = 9.030e-29
Identity = 72/144 (50.00%), Postives = 96/144 (66.67%), Query Frame = 1
Query:   10 LTFEIQGPEPGAEVRKVELDRTFPAVQDPIVYALKD-QGQH-KVGYVRVREFNSIVTNRLTDALEEMKAGGADEFVLDLRGNGGGAFQSALGIAGLFMENKPITYVVDGSGERAEFKTKTGALVPDA--PLVVWVDGMSASASE 429
            +TF I+    G E R V L R F  V+DPI Y + + +G   KVGYVR+ EFNS+V  +L  AL ++++ G D +VLD+RGN GGAFQSA+ IAGLF+ +   T VVDG+G   +F+T    ++  A  P+VVWVDG SASASE
Sbjct:  279 VTFTIRR---GDEARDVTLKRQFSEVKDPISYRISEIRGDGLKVGYVRIAEFNSLVKIKLEAALNDLESQGVDAYVLDVRGNPGGAFQSAIEIAGLFLSDALATDVVDGNGVDLKFRTSKDNVIIGASDPVVVWVDGRSASASE 419          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20530.5324.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JU13_9PHAE8.170e-6370.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLB8_ECTSI5.870e-6070.63TSPc domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835YMM1_9STRA2.580e-4056.20ClpP/crotonase-like domain-containing protein n=1 ... [more]
A0A7S3XXB5_HETAK5.200e-3750.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
B7G1X7_PHATC5.440e-3353.85Predicted protein (Fragment) n=2 Tax=Phaeodactylum... [more]
A0A7S2XWX3_9STRA1.910e-3144.76Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4R018_9STRA8.740e-3145.39Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S1ZFG3_TRICV3.690e-2946.62Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
B8BRY2_THAPS4.550e-2948.97Carboxyl-terminal protease (Fragment) n=1 Tax=Thal... [more]
K0SEE0_THAOC9.030e-2950.00Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20530contigH-paniculata_contig20530:2506..4232 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score209.9
Seed ortholog evalue7.7e-52
Seed eggNOG ortholog2880.D8LLB8
KEGG koko:K03797
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004175,GO:0005575,GO:0005622,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009579,GO:0016787,GO:0019538,GO:0031977,GO:0043170,GO:0044238,GO:0044424,GO:0044436,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564
EggNOG free text desc.serine-type peptidase activity
EggNOG OGs2QT7D@2759,COG0793@1
EC3.4.21.102
COG Functional cat.M
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002
Exons3
Model size429
Cds size429
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20530.5324.1prot_H-paniculata_contig20530.5324.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig20530 2506..4232 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929534.9365036-CDS-H-paniculata_contig20530:2505..26131622929534.9365036-CDS-H-paniculata_contig20530:2505..2613Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20530 2506..2613 -
1691480902.7934394-CDS-H-paniculata_contig20530:2505..26131691480902.7934394-CDS-H-paniculata_contig20530:2505..2613Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20530 2506..2613 -
1622929534.9585836-CDS-H-paniculata_contig20530:3222..34291622929534.9585836-CDS-H-paniculata_contig20530:3222..3429Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20530 3223..3429 -
1691480902.8183749-CDS-H-paniculata_contig20530:3222..34291691480902.8183749-CDS-H-paniculata_contig20530:3222..3429Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20530 3223..3429 -
1622929534.973515-CDS-H-paniculata_contig20530:4118..42321622929534.973515-CDS-H-paniculata_contig20530:4118..4232Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20530 4119..4232 -
1691480902.827285-CDS-H-paniculata_contig20530:4118..42321691480902.827285-CDS-H-paniculata_contig20530:4118..4232Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20530 4119..4232 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig20530.5324.1

>prot_H-paniculata_contig20530.5324.1 ID=prot_H-paniculata_contig20530.5324.1|Name=mRNA_H-paniculata_contig20530.5324.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=143bp
GKTLTFEIQGPEPGAEVRKVELDRTFPAVQDPIVYALKDQGQHKVGYVRV
REFNSIVTNRLTDALEEMKAGGADEFVLDLRGNGGGAFQSALGIAGLFME
NKPITYVVDGSGERAEFKTKTGALVPDAPLVVWVDGMSASASE
back to top

mRNA from alignment at H-paniculata_contig20530:2506..4232-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig20530.5324.1 ID=mRNA_H-paniculata_contig20530.5324.1|Name=mRNA_H-paniculata_contig20530.5324.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1727bp|location=Sequence derived from alignment at H-paniculata_contig20530:2506..4232- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGGAAAACATTAACTTTCGAGATTCAGGGCCCCGAGCCTGGAGCCGAGGT TCGGAAAGTGGAGCTAGACAGGACCTTTCCCGCCGTACAAGATCCAATAG TGTATGCCCTAAAGGTGAGGTGTCAAGAACTAAATAGTACGTACGGTACT GTGTCTCGATGTGGTGTCAATAAAAAGCACTTGATTTTACTGGTAAAGAG TGTATGCTGCATGCTGTCAAAATGTGCTCAATTTTATTGCTTGTTTAAAA GTACTTGAATTTGGTGTGGTACCAGACATACTTGAGTTTAGTGCGTGTGT CCCCCCCCCCCACCCCAGATTTTTGCTATTCGTAGTTGTTTTGTAACACC TCGAAAGAGCAGGTGAAACTTGCGGGATTTTGTAGTACTGTATATAGGAA GCAACGCAACGGGGATTTGCATGCCGATCTACTCTCAGCGCGTGGTAAAT TTGTACTGTGGAATCGCACATAGTACACTAGTATGAAGTGCCGAAGCACT TGGTCGTGTGGATGTAGCAAGAAATTTTCGGAGAAATAGTTTTGTGCGAG AGGTCGCCCATCCGTTTTGGGGTCACTGCTTCAACGAGCGACATGTAATA ATCGATGTGAAATGTCAGAAAAGGTTACATACAGGGTGAGTTCGGTTGGG GGTTATGCAGTAAGAACAGCAGCAGTAGCAGTTCCGTCGCAAAAATTGGC GTCAAAATCCACTTTTTTGTCAATCCATTTTGTGATTATATCCACCGTCT CTTACATGTCAATCCTCAAACTCTTCAATGCTCCCCATACCTTTGGCTGC TAGGACCAAGGGCAGCACAAGGTGGGCTACGTGCGCGTGCGCGAGTTCAA CTCCATCGTAACGAACCGCCTGACGGACGCTCTGGAAGAGATGAAGGCTG GAGGAGCCGACGAGTTTGTCCTCGACTTGAGGGGCAACGGCGGCGGGGCT TTCCAGAGCGCTCTCGGCATCGCTGGGCTTTTCATGGAGAACAAGCCCAT TACTTACGTGGTAATGAGTGGGGCTAGTGTTAGGGTTGAACTAGGGTAGC CCCTGTTGGGTAACCCCTTAAGGTTAGGAGTAGGAGAAGGGCAAAGAGAG CCACGACAACGACTACACATAATTTGTTTCGTGTGATTAGAGTAGCGTGT TGAATAATGCTTAGACCAAAGAAAAATGTGTTTACGCGCGCGAGGGAGAA AGAAAGGGGACGACACAACGATGACGAGTTTTTTTTTTTTCAAGTGTTTT CTCGAGTGAGAGCCGAGCAGTCGACGCGATCTCGCATGTGGGAATTAAAT GGCGATGTTTTCGCCGGAATCCCCCTCCCCCTCCTCCTCCCCCTCCCCCT CCCCCTCCCCCGAGCCCCGTCTTCCCACCCCCGGAATTCTGGGGGATTGA TCTAACACTGTCTGTTATTATTCTAGAATTGTTGCATAACATCTCTTCAT ATCATGGAAATTGCCGTGTGTTGCAAACGTCGGTTATTCATCTACTGCGT GGGCTGGTTGAGGATATATACCCCTCCAGGTTTCTTTTCTGTCACCACCA CCACCATTGATCCCGCCACCCATCGCCGCCCTCTGATGTTCGACTGACTC GCTTTCCTCATCGGTGCAGGTGGATGGCAGCGGAGAACGCGCGGAATTCA AGACGAAAACTGGAGCGTTGGTGCCGGACGCACCTCTCGTTGTATGGGTG GATGGTATGTCGGCTAGCGCCAGCGAG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig20530:2506..4232-

>mRNA_H-paniculata_contig20530.5324.1 ID=mRNA_H-paniculata_contig20530.5324.1|Name=mRNA_H-paniculata_contig20530.5324.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=858bp|location=Sequence derived from alignment at H-paniculata_contig20530:2506..4232- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGGAAAACATTAACTTTCGAGATTCAGGGCCCCGAGCCTGGAGCCGAGGT
TCGGAAAGTGGAGCTAGACAGGACCTTTCCCGCCGTACAAGATCCAATAG
TGTATGCCCTAAAGGGGAAAACATTAACTTTCGAGATTCAGGGCCCCGAG
CCTGGAGCCGAGGTTCGGAAAGTGGAGCTAGACAGGACCTTTCCCGCCGT
ACAAGATCCAATAGTGTATGCCCTAAAGGACCAAGGGCAGCACAAGGTGG
GCTACGTGCGCGTGCGCGAGTTCAACTCCATCGTAACGAACCGCCTGACG
GACGCTCTGGAAGAGATGAAGGCTGGAGGAGCCGACGAGTTTGTCCTCGA
CTTGAGGGGCAACGGCGGCGGGGCTTTCCAGAGCGCTCTCGGCATCGCTG
GGCTTTTCATGGAGAACAAGCCCATTACTTACGTGGACCAAGGGCAGCAC
AAGGTGGGCTACGTGCGCGTGCGCGAGTTCAACTCCATCGTAACGAACCG
CCTGACGGACGCTCTGGAAGAGATGAAGGCTGGAGGAGCCGACGAGTTTG
TCCTCGACTTGAGGGGCAACGGCGGCGGGGCTTTCCAGAGCGCTCTCGGC
ATCGCTGGGCTTTTCATGGAGAACAAGCCCATTACTTACGTGGTGGATGG
CAGCGGAGAACGCGCGGAATTCAAGACGAAAACTGGAGCGTTGGTGCCGG
ACGCACCTCTCGTTGTATGGGTGGATGGTATGTCGGCTAGCGCCAGCGAG
GTGGATGGCAGCGGAGAACGCGCGGAATTCAAGACGAAAACTGGAGCGTT
GGTGCCGGACGCACCTCTCGTTGTATGGGTGGATGGTATGTCGGCTAGCG
CCAGCGAG
back to top