prot_H-paniculata_contig20522.5321.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig20522.5321.1
Unique Nameprot_H-paniculata_contig20522.5321.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length57
Homology
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BLAST of mRNA_H-paniculata_contig20522.5321.1 vs. uniprot
Match: D8LS80_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS80_ECTSI)

HSP 1 Score: 79.0 bits (193), Expect = 5.650e-16
Identity = 38/57 (66.67%), Postives = 48/57 (84.21%), Query Frame = 0 
Query:    1 EKHIRQHQQVAAINKERALNRPSHQRHAERLRTGHDVISNQDFSGREGRLPPPPRAR 57
            E +IRQH++ AA +++R LNRPSH RH E LRTGH+VISNQDF+GREG+ PP PRA+
Sbjct:  158 EDNIRQHERAAAASEQRTLNRPSHMRHVEVLRTGHNVISNQDFAGREGKPPPQPRAK 214
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BLAST of mRNA_H-paniculata_contig20522.5321.1 vs. uniprot
Match: A0A6H5L4A6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4A6_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 3.930e-15
Identity = 37/57 (64.91%), Postives = 48/57 (84.21%), Query Frame = 0 
Query:    1 EKHIRQHQQVAAINKERALNRPSHQRHAERLRTGHDVISNQDFSGREGRLPPPPRAR 57
            E +IRQH++ AA ++++ LNRPSH RH E LRTGH+VISNQDF+GREG+ PP PRA+
Sbjct:  237 EDNIRQHERAAAASEQQILNRPSHMRHVEVLRTGHNVISNQDFAGREGKPPPQPRAK 293
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20522.5321.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LS80_ECTSI5.650e-1666.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4A6_9PHAE3.930e-1564.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20522contigH-paniculata_contig20522:4161..4331 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20522.5321.1mRNA_H-paniculata_contig20522.5321.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig20522 4161..4331 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig20522.5321.1 ID=prot_H-paniculata_contig20522.5321.1|Name=mRNA_H-paniculata_contig20522.5321.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=57bp
EKHIRQHQQVAAINKERALNRPSHQRHAERLRTGHDVISNQDFSGREGRL
PPPPRAR
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