mRNA_H-paniculata_contig2051.5315.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig2051.5315.1 vs. uniprot
Match: D7FUH9_ECTSI (Importin subunit alpha n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUH9_ECTSI) HSP 1 Score: 500 bits (1288), Expect = 1.820e-159 Identity = 369/577 (63.95%), Postives = 407/577 (70.54%), Query Frame = 3
Query: 369 KDIKAGNDPTDLRRRRADTTISLRKAKKEQGL--AAKRRNTAASXXXXXXXXXXXXXXQSAGASIAGXXXXXXXXXXXXAAAPPRQYAPGDVPELAQKLRSGDA--VVRVEAARGLRKVLSLESDPPVDAVIDAGVMPLLVLCLDQLDHTDLQFEAAWALTNIASTNKTRAVVDNAAVPGLVRNLRHHNPDLREQCAWCLGNIAGDCADLRDVVLGTNDALAALLLNVTQPATESLLRNCVWALSNMCRGKPQPEVQLLAPALPVLLGLLASPDKEVLVDTCWALSYLSDGDTDRITAVMSSGVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGVVQGVIDQLEGGVWEVQKEANFVISNIATAGDAPRVRQLVEQGAIHALCQMIDRADAKVILVALDAISSILSYDNNDAGLPWAQLVDEAGGLDRLEQLQEHENSKVYDKAVMIIERYFGCEDDEEEDERFAPVIAEGGETFSFGATAAGASSANDTPSKSCGMAT------GTEGLPAFGSPQRALNFA 2069
+DIKAG DPTDLRRRRADT +SLRK KKE GL AA++ +AA DVP+L + L +G RVEAARGLRKVLSLE+DPPV VI AG MPLLVLCLD+ TDLQFEAAWALTNIAST KT AVV + AVP LVRNLRHHN A+LRDVVLGT DAL LLLNV QPAT SLLRNCVWALSNMCRGKPQP++ LLAPALPVLL LL+S D EVLVDTCWALSYLSDG T+RI V+SSGV XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +PG++ GVI+ L G VWEVQKEANFVISN+ATA DA RVRQLV AI AL M+DRADAK ILVALDAIS+I + D+ D GLPW Q+ DE+GGLDRLEQLQEHEN VYDKA+ IIER++GCEDD+EED AP + +G TFSFGA A A++ T S +CG G G+P FGSP RALNFA
Sbjct: 14 RDIKAGVDPTDLRRRRADTALSLRKQKKESGLEDAAQKPVSAA-----------------------------------------------DVPDLTRALAAGAGGPAARVEAARGLRKVLSLETDPPVAEVIQAGAMPLLVLCLDEHSSTDLQFEAAWALTNIASTCKTDAVVQHGAVPALVRNLRHHNQXXXXXXXXXXXXXXXXXAELRDVVLGTPDALEGLLLNVVQPATPSLLRNCVWALSNMCRGKPQPDMSLLAPALPVLLNLLSSDDSEVLVDTCWALSYLSDGTTERIETVISSGVARPLTALLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASVCDSPGLLGGVIELLSGDVWEVQKEANFVISNVATASDASRVRQLVNLEAIPALSSMLDRADAKAILVALDAISAIFALDSEDNGLPWVQMFDESGGLDRLEQLQEHENRAVYDKAIEIIERFYGCEDDDEEDAHVAPTVVDGASTFSFGA--ADAATPGKTASSTCGAEMNSSPCGGGAGMPIFGSPVRALNFA 541
BLAST of mRNA_H-paniculata_contig2051.5315.1 vs. uniprot
Match: A0A6S9FIN1_HETAK (Importin subunit alpha n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FIN1_HETAK) HSP 1 Score: 346 bits (888), Expect = 2.610e-102 Identity = 280/529 (52.93%), Postives = 344/529 (65.03%), Query Frame = 3
Query: 369 KDIKAGNDPTDLRRRRADTTISLRKAKKEQGLAAKRRNTAASXXXXXXXXXXXXXXQSAGASIAGXXXXXXXXXXXXAAAPPRQYAPGDVPELAQKLRSGDAVVRVEAARGLRKVLSLESDPPVDAVIDAGVMPLLVLCLDQLDHTDLQFEAAWALTNIASTNKTRAVVDNAAVPGLVRNLRHHNPDLREQCAWCLGNIAGDCADLRDVVLGTNDALAALLLNVTQPATESLLRNCVWALSNMCRGKPQPEVQLLAPALPVLLGLLASPDKEVLVDTCWALSYLSDGDTDRITAVMSSGVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGVVQGVIDQLEGGVWEVQKEANFVISNIATAGDAPRVRQLVEQGAIHALCQMIDRADAKVILVALDAISSIL-SYDNNDAGLPWAQLVDEAGGLDRLEQLQEHENSKVYDKAVMIIERYFGCEDDEEEDERFAPVIAEGGETFSFG 1952
KD K G D D RRRR +TT+SLRKAKKE+GLA KRRN + Q G S + Y D+P L ++S D V +E+ RG R++LS+E++PPV V+ AGV+ L+ L + D ++LQFEAAWALTNIAST T VV++ AVPGLV L H DLREQ AWCLGNIAGDC + RD++L L LL+N+ QP + +LLRN WALSN CRGKPQP+++ + PA+P L LL D+E +VD CWALSYLSDG+ DRI A + GVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AP V+ I QL G W+ G R LV+QG + +C ++ +D+K+ILVALDA+ ++L D +D + W LVDEA G++++E LQEHE+ +VY+KAV ++E +F ED EEEDE AP A G F FG
Sbjct: 9 KDFKKGIDTGDSRRRRGETTVSLRKAKKEEGLA-KRRNVRVNNFVSEDPQP-----QGGGNS-------------------KKTYTISDIPALRTGIQSSDLAVLIESTRGFRRLLSVETNPPVQDVLAAGVLDTLISLLGRTDSSELQFEAAWALTNIASTEHTAVVVEHGAVPGLVALLTHAKGDLREQSAWCLGNIAGDCTEFRDMILQAG-GLNPLLMNIAQPESLTLLRNVTWALSNFCRGKPQPDLETVRPAIPALASLLTHTDQETVVDACWALSYLSDGEDDRIQACVDGGVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPQISALLAAPNVIGHAIGQLAQGEWDXXXXXXXXXXXXXXXGTWEHARVLVDQGCLEPICDLLGVSDSKIILVALDALEALLRKADAHDQAVEWVTLVDEADGIEKIEALQEHEHEEVYEKAVAVLEEFFAAED-EEEDENLAPNAAAGDGGFQFG 510
BLAST of mRNA_H-paniculata_contig2051.5315.1 vs. uniprot
Match: F0Y3B0_AURAN (IBB domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3B0_AURAN) HSP 1 Score: 316 bits (810), Expect = 7.470e-92 Identity = 202/519 (38.92%), Postives = 259/519 (49.90%), Query Frame = 3
Query: 405 RRRRADTTISLRKAKKEQGLAAKRRNTAASXXXXXXXXXXXXXXQSAGASIAGXXXXXXXXXXXXAAAPPRQYAPGDVPELAQKLRSGDAVVRVEAARGLRKVLSLESDPPVDAVIDAGVMPLLVLCLDQLDHTDLQFEAAWALTNIASTNKTRAVVDNAAVPGLVRNLRHHNPDLREQCAWCLGNIAGDCADLRDVVLGTNDALAAL---LLNVTQPATESLLRNCVWALSNMCRGKPQPEVQLLAPALPVLLGLLASPDKEVLVDTCWALSYLSDGDTDRITAVMSSGVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGVVQGVIDQLEGGVWEVQKEANFVISNIATAGDAPRVRQLVEQGAIHALCQMIDRADAKVILVALDAISSILSYDNNDAGLPWAQLVDEAGGLDRLEQLQEHENSKVYDKAVMIIERYFGCEDDEEEDERFAPVIAEGGETFSFG 1952
RRRR DTT+ +RK K+E+GLA +R AG A P + D+P L +++S D V V A RG RK+LS+E PPVDAV+ GV+ +L L +LQFEAAWALTN+AST+KT+AVVD VP +V+ ++ N D+REQC WCLGNIAGD + RD VL A AL + N+ PAT SLLRN W+LSN+CRG P+P+V LAPA+PVL+GLL S D + L+D CWALSYLSDGD RI V+ G +++ V+ QL+ G W+ G V LVE G I LC ++ A+AK++ VALDA+ +IL + G+P A LVDEA G+++LE LQ HEN++VY+KAV IIE YFG EDDE D AP IA G FSFG
Sbjct: 3 RRRREDTTLQIRKNKREEGLAKRR-------AFQRDVAPVLAPKPDAGNPAA-----------------PERPTVADMPRLLNEIQSQDPAVVVAATRGWRKLLSVEPQPPVDAVLATGVVAVLARLLAHHAMPELQFEAAWALTNVASTDKTQAVVDAGVVPAMVQLMQSPNGDVREQCIWCLGNIAGDSTESRDAVLAAGRAAGALEPLIANLQNPATTSLLRNATWSLSNLCRGTPKPDVARLAPAIPVLVGLLRSDDVDTLMDACWALSYLSDGDEARIQCVVDHGAAAALSPLLGHASHKVVTPALRTLGNVVTGNDAQTQAALDAGVLAHVAALLASPRKAIRKETCWLVSNVAAGTPPQIAAVASDAALLKLVVHQLDAGDWDXXXXXXXXXXXXXXGGHKNHVLALVEHGVIKPLCALLATAEAKIVTVALDALEAILKV-GHFGGVPAANLVDEADGVEKLENLQHHENARVYEKAVGIIETYFGAEDDEAPD--VAPDIAGDGAAFSFG 494
BLAST of mRNA_H-paniculata_contig2051.5315.1 vs. uniprot
Match: A0A7S4QYI7_9STRA (Importin subunit alpha n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QYI7_9STRA) HSP 1 Score: 308 bits (788), Expect = 2.840e-88 Identity = 270/541 (49.91%), Postives = 350/541 (64.70%), Query Frame = 3
Query: 378 KAGNDPTDLRRRRADTTISLRKAKKEQGLAAKRRNTAASXXXXXXXXXXXXXX-QSAGASIAGXXXXXXXXXXXXAAAPPRQYAPGDVPELAQKL--RSGDAVVRVEAARGLRKVLSLESDPPVDAVIDAGVMPLLVLCLDQLDHTDLQFEAAWALTNIASTNKTRAVVDNAAVPGLVRNLRHHNPDLREQCAWCLGNIAGDCADLRDVVLGTNDALAALLLNVTQPATESLLRNCVWALSNMCRGKPQPEVQLLAPALPVLLGLLASPDKEVLVDTCWALSYLSDGDTDRITAVMSSGVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGVVQGVIDQLEGGVWEVQKEANFVISNIATAGDAPRVRQLVEQGAIHALCQMIDRADAKVILVALDAISSILSYDNNDAGLPWAQLVDEAGGLDRLEQLQEHENSKVYDKAVMIIERYFGCEDDEEEDERFAPVIAEGGETFSFGATAAGASSANDTP 1991
K G D T+ RRRR DT ++LRK K+E+GLA +R AA+ ++ + G + + D+P L L ++ D +EA +G R++LS+E++PPV V+D G M + L++ D +QFEAAWALTNIAST T V D A+P LV+ LR N D+REQ AWCLGN+AGD LRD VL A+ LLLNV PA++S L N VW LSN CRG+PQP++ ++ A+P L +L +++ ++D CWALSYLSDG DR+ AV+ +GVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + + +++ ++ VW V+KEA +VI NIAT G VR LV+ I ALC ++D ADAK+ LVALDAI SIL + + +DEAGG+D+LE L +HEN +VY KA+ II+ +FG +DD ++ P +E T+SFG + S+A + P
Sbjct: 11 KKGIDSTESRRRRDDTRLTLRKNKREEGLAKRRAMGAATVGAIPSNSTEQLISAENDSTPVVGVSGK-------------KVFTVADIPSLLPVLTNQASDNDSLLEAVKGFRRMLSVETNPPVKEVLDCGAMTYFIKLLERTDFEMIQFEAAWALTNIASTEHTATVADAGAIPSLVQLLRSPNADVREQSAWCLGNVAGDSTALRDFVLSAG-AMEPLLLNVAHPASKSCLLNAVWTLSNFCRGQPQPDLSVVGQAIPHLAAILQGENRDAMMDACWALSYLSDGSDDRVQAVIDAGVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTLLESRQEIMAIVNAMKAEVWYVRKEAAWVICNIATGGSDYHVRCLVDLFVIDALCDILDVADAKITLVALDAIKSILKVGD------YISFIDEAGGIDQLESLLDHENDEVYQKAIEIIDEFFGVDDDVADE--LVPEQSEN--TYSFGVSNNMKSNAGEAP 527
BLAST of mRNA_H-paniculata_contig2051.5315.1 vs. uniprot
Match: A0A7S4QXX2_9STRA (Importin subunit alpha n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QXX2_9STRA) HSP 1 Score: 302 bits (773), Expect = 3.100e-86 Identity = 265/528 (50.19%), Postives = 337/528 (63.83%), Query Frame = 3
Query: 378 KAGNDPTDLRRRRADTTISLRKAKKEQGLAAKRRNTAASXXXXXXXXXXXXXX-QSAGASIAGXXXXXXXXXXXXAAAPPRQYAPGDVPELAQKL--RSGDAVVRVEAARGLRKVLSLESDPPVDAVIDAGVMPLLVLCLDQLDHTDLQFEAAWALTNIASTNKTRAVVDNAAVPGLVRNLRHHNPDLREQCAWCLGNIAGDCADLRDVVLGTNDALAALLLNVTQPATESLLRNCVWALSNMCRGKPQPEVQLLAPALPVLLGLLASPDKEVLVDTCWALSYLSDGDTDRITAVMSSGVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGVVQGVIDQLEGGVWEVQKEANFVISNIATAGDAPRVRQLVEQGAIHALCQMIDRADAKVILVALDAISSILSYDNNDAGLPWAQLVDEAGGLDRLEQLQEHENSKVYDKAVMIIERYFGCEDDEEEDERFAPVIAEGGETFSFG 1952
K G D T+ RRRR DT ++LRK K+E+GLA +R AA+ ++ + G + + D+P L L ++ D +EA +G R++LS+E++PPV V+D G M + L++ D +QFEAAWALTNIAST T V + A+P LV+ LR N D+REQ AWCLGN+AGD LRD VL A+ LLLNV QPA++SLL N VW LSN CRGKPQP++ ++ A+P L G+L ++ ++D CWALSYLSDG DRI AV+++GVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + + VI+ + VW+V T G V+ LV+ GAI ALC+++D ADAK+ LVALDAI SIL + + VDEAGG++ +E LQ HEN +VY+KAV IIE +FG +DD ++ P +E T+SFG
Sbjct: 11 KKGIDSTESRRRRDDTRLTLRKNKREEGLAKRRAMGAATVGAIPSNSTEQLISAENDSTPVVGVSGK-------------KVFTVADIPSLLPVLTNQASDNDSLLEAVKGFRRMLSVETNPPVKEVLDCGAMTYFIKLLERTDFEMIQFEAAWALTNIASTEHTATVAEAGAIPSLVQLLRSPNADVREQSAWCLGNVAGDSTALRDFVLSAG-AMEPLLLNVAQPASDSLLLNAVWTLSNFCRGKPQPDLSVVGQAIPALAGILQGENRNAMMDACWALSYLSDGSDDRIQAVINAGVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGQIGTLLESRQDMSSVINAVRTEVWDVXXXXXXXXXXXXTGGAEYHVKCLVDLGAIVALCEILDVADAKITLVALDAIKSILKVGD------YTSFVDEAGGIEAIESLQHHENEEVYEKAVEIIEEFFGADDDIADE--LVPEASEN--TYSFG 514
BLAST of mRNA_H-paniculata_contig2051.5315.1 vs. uniprot
Match: A0A835YTP4_9STRA (Importin subunit alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTP4_9STRA) HSP 1 Score: 300 bits (767), Expect = 1.140e-85 Identity = 240/528 (45.45%), Postives = 304/528 (57.58%), Query Frame = 3
Query: 369 KDIKAGNDPTDLRRRRADTTISLRKAKKEQGLAAKRRNTAASXXXXXXXXXXXXXXQSAGASIAGXXXXXXXXXXXXAAAPPRQYAPGDVPELAQKLRSGDAVVRVEAARGLRKVLSLESDPPVDAVIDAGVMPLLVLCLDQLDHTDLQFEAAWALTNIASTNKTRAVVDNAAVPGLVRNLRHHNPDLREQCAWCLGNIAGDCADLRDVVLGTNDALAALLLNVTQPATESLLRNCVWALSNMCRGKPQPEVQLLAPALPVLLGLLASPDKEVLVDTCWALSYLSDGDTDRITAVMSSGVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGVVQGVIDQLEGGVWEVQKEANFVISNIATAGDAPRVRQLVEQGAIHALCQMIDRADAKVILVALDAISSILSYDNNDAGLPWAQLVDEAGGLDRLEQLQEHENSKVYDKAVMIIERYFGCEDDEEEDERFAPVIAEGGETFSFG 1952
+D K G D RRRR + +S+RK K+E+GL KRRN + G S AAAP D+ L L D V+++ RG+RK+LS E +PPV V+ AG++P++V L + D T+L FEAAWA+TNIAST+ T V + A+ L R L H + DLREQCAWCLGNIAGD LRD+VL DA+ LLLN+TQ A+ SL+RNCVWALSN CRGKP P +L A A PV + +L+S D E VD WALSYLSDGD DRI V+ +G + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G G + R++V+ G I +C ++D+AD +++VAL+AI +L D++D A VDE GG+D +E+LQ H++ +VY+KA I++ YFG + + EEDE FAP AEG TFSFG
Sbjct: 11 QDYKRGVSCEDARRRRTEHQVSIRKNKREEGLQ-KRRNLEV--------------IEEPGPS------------DETAAAP-------DLQTLKAGLSHADVNVQIQCMRGIRKMLSKEGNPPVKLVMSAGLLPIIVATLSREDSTELMFEAAWAVTNIASTDYTAEVAAHGAIAPLSRLLMHKSADLREQCAWCLGNIAGDSPALRDLVLDGGDAVRGLLLNITQAASPSLMRNCVWALSNFCRGKPHPRAELAAAAAPVAVSVLSSSDDEARVDAGWALSYLSDGDNDRIEVVVDAGALPPLMAMLDSKAAAVVTPALRAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTHQIAALCACEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSKAQARKVVKLGGIAPMCSLLDKADTNIVIVALEAIERMLKADDSDDQAT-ATRVDECGGMDLIERLQYHDDQRVYEKASNILQTYFGGDSEGEEDENFAPNAAEGDATFSFG 503
BLAST of mRNA_H-paniculata_contig2051.5315.1 vs. uniprot
Match: A0A7S1C5A7_9STRA (Importin subunit alpha n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C5A7_9STRA) HSP 1 Score: 287 bits (735), Expect = 1.100e-80 Identity = 260/538 (48.33%), Postives = 333/538 (61.90%), Query Frame = 3
Query: 369 KDIKAGNDPTDLRRRRADTTISLRKAKKEQGLAAKRRNTAASXXXXXXXXXXXXXXQSAGASIAGXXXXXXXXXXXXAAAP----PRQYAPGDVPELAQKLRSGDAVVRVEAARGLRKVLSLESDPPVDAVIDAGVMPLLVLCLDQLDHTDLQFEAAWALTNIASTNKTRAVVDNAAVPGLVRNLRHHNPDLREQCAWCLGNIAGDCADLRDVVLGTNDALAALLLNVTQPATESLLRNCVWALSNMCRGKPQPEVQLLAPALPVLLGLLASPDKEVLVDTCWALSYLSDGDTDRITAVMSSGVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGVVQGVIDQLEGGVWEVQKEANFVISNIATAGDAPRVRQLVEQGAIHALCQMIDRADAKVILVALDAISSILSYDNNDAGLPWAQLVDEAGGLDRLEQLQEHENSKVYDKAVMIIERYFGCEDDEEEDERFAPVIAE------GGETFSFG 1952
KD K + R++R +T I +RK K+ + L KR A+ + +G + AAP P + +P A S + + + E + +R++LS E+DPPV V+ + V+P+L L +L++ LQFEAAWALTNIAST T +VD P L+R LR NPD+REQC WCLGNIAGD RD+VL DA+ L+LN+ P++ S+LRN W LSN CRGKPQP ++ LPVL+ LL S D EVL DTCWALSYLSDGD +RI V+ V XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX P +++ VID L G W+ + G+ + +LV GAI LC+++ AD K++LVA+DA+ ++L +PW LV+EAGGL+RL QLQEH+ +V++KAV I+ R+F EDDE ++ + V E G T+ FG
Sbjct: 32 KDFKKTISTAEARQKRTETNIQIRKNKRLESLNKKRNVGGAADAGAVGGLAAVAAAEESGHA--------GGLTGSTGAAPLTTVPNEVLLDHLPVFAAAAMSDNPIAQYEGTKQIRRLLSKETDPPVVPVLRSEVVPVLADFLGRLENPALQFEAAWALTNIASTEHTEVIVDLGITPLLIRLLRSTNPDVREQCCWCLGNIAGDGHRFRDMVLDQEDAINNLVLNIAHPSSLSMLRNATWTLSNFCRGKPQPSIEAAQEMLPVLVHLLNSTDAEVLTDTCWALSYLSDGDDERIQQVIDFRAVPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALTTVPHLIEQVIDLLGHGEWKXXXXXXXXXXXMTITGNETHIERLVNAGAIPPLCELLMVADTKIMLVAMDALDAVLKA-GIVTNMPWRDLVEEAGGLERLYQLQEHKTKEVWEKAVSILRRHFP-EDDETGEDGYGAVAPEMTTGEDGAVTYGFG 559
BLAST of mRNA_H-paniculata_contig2051.5315.1 vs. uniprot
Match: A0A7S2R1K1_9STRA (Importin subunit alpha n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R1K1_9STRA) HSP 1 Score: 286 bits (732), Expect = 1.380e-80 Identity = 254/531 (47.83%), Postives = 317/531 (59.70%), Query Frame = 3
Query: 369 KDIKAGNDPTDLRRRRADTTISLRKAKKEQGLAAKRRNTAASXXXXXXXXXXXXXXQSAGASIAGXXXXXXXXXXXXAAAPPRQYAPGDVPELAQ--KLRSGDAVVRVEAARGLRKVLSLESDPPVDAVIDAGVMPLLVLCLDQLDHTDLQFEAAWALTNIASTNKTRAVVDNAAVPGLVRNLRHHNPDLREQCAWCLGNIAGDCADLRDVVLGTNDALAALLLNVTQPATESLLRNCVWALSNMCRGKPQPEVQLLAPALPVLLGLLASPDKEVLVDTCWALSYLSDGDTDRITAVMSSGVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGVVQGVIDQLEGGVWEVQKEANFVISNIATAGDAPRVRQLVEQGAIHALCQMIDRADAKVILVALDAISSILSY-DNNDAGLPWAQLVDEAGGLDRLEQLQEHENSKVYDKAVMIIERYFGCEDDEEEDERFAPVIAEGGETFSFG 1952
+D K G D + RRRR + + LRK KKE+G+ +R T + A+I + Y D+P L Q S + +EA RG+RK+LS+E +PPV+ VID G +P+LV L ++D D+ FEAAWALTN+AST+KTR VVD+ AVP L+ L D+REQ AWCLGNIAGD DLR VL + LL N+ +P +ESLL NCVWALSN CRGKPQP++ L+A A+P L G+L P + L+D CWALSYLSDGD RI AVM+SGVV XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D+ V +V+ GAI A+C +++ +DAK+ LV L+AI +I + N + Q+V E GLD +E+LQEH+N ++Y+KAV IIE YFG E++ E DE P I G+TFSFG
Sbjct: 11 RDYKKGIDAIEGRRRRDNHVVQLRKNKKEEGMMKRRAMTTTAEVNSL-------------ATIDATNTSDVNNTTEK-----KMYTKIDLPGLMQIFATESTNNSRILEAVRGIRKMLSVEVNPPVNEVIDCGALPILVELLKKVDSNDILFEAAWALTNVASTDKTRNVVDSGAVPHLINLLLCKGADVREQSAWCLGNIAGDSPDLRTYVLECG-GMGPLLKNIAEPESESLLNNCVWALSNFCRGKPQPDLDLVAAAIPYLAGILQRPSGDALMDACWALSYLSDGDDTRIDAVMNSGVVPDIVSFLGSGKANVVTPALRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKDSD-VLAIVQMGAIEAICSVLEASDAKITLVGLEAIENIFRVGERNGKNEEYLQIVHECDGLDIIEKLQEHKNEEIYEKAVSIIEAYFGVEENVE-DENLVPNIE--GDTFSFG 518
BLAST of mRNA_H-paniculata_contig2051.5315.1 vs. uniprot
Match: A0A7S4QXW8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QXW8_9STRA) HSP 1 Score: 279 bits (714), Expect = 1.430e-79 Identity = 239/427 (55.97%), Postives = 301/427 (70.49%), Query Frame = 3
Query: 711 VLSLESDPPVDAVIDAGVMPLLVLCLDQLDHTDLQFEAAWALTNIASTNKTRAVVDNAAVPGLVRNLRHHNPDLREQCAWCLGNIAGDCADLRDVVLGTNDALAALLLNVTQPATESLLRNCVWALSNMCRGKPQPEVQLLAPALPVLLGLLASPDKEVLVDTCWALSYLSDGDTDRITAVMSSGVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGVVQGVIDQLEGGVWEVQKEANFVISNIATAGDAPRVRQLVEQGAIHALCQMIDRADAKVILVALDAISSILSYDNNDAGLPWAQLVDEAGGLDRLEQLQEHENSKVYDKAVMIIERYFGCEDDEEEDERFAPVIAEGGETFSFGATAAGASSANDTP 1991
+LS+E++PPV V+D G + V L++ D +QFEAAWALTNIAST T V D A+P LV+ LR N D+REQ AWCLGN+AGD LRD VL A+ LLLNV PA++S L N VW LSN CRG+PQP++ ++ A+P L +L +++ ++D CWALSYLSDG DR+ AV+ +GVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + + +++ ++ VW V+KEA +VI NIAT G VR LV+ I ALC ++D ADAK+ LVALDAI SIL + + +DEAGG+D+LE L +HEN +VY KA+ II+ +FG +DD ++ P +E T+SFG + S+A + P
Sbjct: 1 MLSVETNPPVKEVLDCGAIKFFVKLLERTDFEMIQFEAAWALTNIASTEHTATVADAGAIPSLVQLLRSPNADVREQSAWCLGNVAGDSTALRDFVLSAG-AMEPLLLNVAHPASKSCLLNAVWTLSNFCRGQPQPDLSVVGQAIPHLAAILQGENRDAMMDACWALSYLSDGSDDRVQAVIDAGVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTLLESRQEIMAIVNAMKAEVWYVRKEAAWVICNIATGGSDYHVRCLVDLFVIDALCDILDVADAKITLVALDAIKSILKVGD------YISFIDEAGGIDQLESLLDHENDEVYQKAIEIIDEFFGVDDDVADE--LVPEQSEN--TYSFGVSNNMKSNAGEAP 416
BLAST of mRNA_H-paniculata_contig2051.5315.1 vs. uniprot
Match: W7TTB3_9STRA (Importin subunit alpha n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTB3_9STRA) HSP 1 Score: 282 bits (721), Expect = 4.200e-79 Identity = 239/519 (46.05%), Postives = 297/519 (57.23%), Query Frame = 3
Query: 390 DPTDLRRRRADTTISLRKAKKEQGLAAKRRNT--------AASXXXXXXXXXXXXXXQSAGASIAGXXXXXXXXXXXXAAAPPRQYAPGDVPELAQKLRSGDAVVRVEAARGLRKVLSLESDPPVDAVIDAGVMPLLVLCLDQLDH-TDLQFEAAWALTNIASTNKTRAVVDNAAVPGLVRNLRHHNPDLREQCAWCLGNIAGDCADLRDVVLGTNDALAALLLNVTQPATESLLRNCVWALSNMCRGKPQPEVQLLAPALPVLLGLLASP-DKEVLVDTCWALSYLSDGDTDRITAVMSSGVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGVVQGVIDQLEGGVWEVQKEANFVISNIATAGDAPRVRQLVEQGAIHALCQMIDRADAKVILVALDAISSILSYDNNDAGLPWAQ-------LVDEAGGLDRLEQLQEHENSKVYDKAVMIIERYFGCEDDEE 1895
D RRRR + + +RK K+E L+ +RR AA+ + GA++ G D+P A +RSGD VEA RG+RK+LS+E PPV+ V+ ++PLLV LD+ T LQFEAAWALTNIAST+ TRA+V + A+P L R L + D+REQCAW LGN++GDC +LRD+VL + AL LL NV PA+ES+LRNC+W+LSN+CRGKPQP V LL PALPVL +LAS D E L DT WALSY+SDGD RI AV+ + V XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G+V+ V+ Q+ WE V LVE G + L ++D AD KVI VALDA+ +IL G+P A L+ EA +RLE+LQEH + K+Y +AV IIE Y G E++EE
Sbjct: 13 DGDSCRRRREEQQVQIRKQKREDSLSQRRRMDNDSQSTVPAATNYPAAGSFGTSVGLAAGGANLGGPQVE-------------------DLPRFALDMRSGDVAREVEATRGVRKLLSVERKPPVEEVLAQNILPLLVGLLDRDGAPTQLQFEAAWALTNIASTSFTRALVVHGAIPPLTRLLLSPSADVREQCAWALGNVSGDCPELRDMVL-QHGALRPLLQNVLAPASESMLRNCIWSLSNLCRGKPQPHVDLLRPALPVLAQVLASSSDPECLQDTAWALSYISDGDGARIQAVLDADVASDLVKHLTHPLPNVVTPVVRALGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRQQVHALATTQGLVKAVLTQMSQAEWEXXXXXXXXXXXXXXXXSGQHVHMLVELGVLKPLSDLLDAADVKVIEVALDALEAILKVWKT--GVPLAHGECDYMVLLQEADLHERLEKLQEHASEKIYRRAVDIIENYLGVEEEEE 509 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2051.5315.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2051.5315.1 >prot_H-paniculata_contig2051.5315.1 ID=prot_H-paniculata_contig2051.5315.1|Name=mRNA_H-paniculata_contig2051.5315.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=592bp MSSSAAIVNAGVGGSAAAAAAQRRKDIKAGNDPTDLRRRRADTTISLRKAback to top mRNA from alignment at H-paniculata_contig2051:11945..21485+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2051.5315.1 ID=mRNA_H-paniculata_contig2051.5315.1|Name=mRNA_H-paniculata_contig2051.5315.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9541bp|location=Sequence derived from alignment at H-paniculata_contig2051:11945..21485+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2051:11945..21485+ >mRNA_H-paniculata_contig2051.5315.1 ID=mRNA_H-paniculata_contig2051.5315.1|Name=mRNA_H-paniculata_contig2051.5315.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3552bp|location=Sequence derived from alignment at H-paniculata_contig2051:11945..21485+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |