prot_H-paniculata_contig2049.5307.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2049.5307.1
Unique Nameprot_H-paniculata_contig2049.5307.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length355
Homology
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BLAST of mRNA_H-paniculata_contig2049.5307.1 vs. uniprot
Match: A0A6H5KVL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVL7_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 2.470e-9
Identity = 56/155 (36.13%), Postives = 69/155 (44.52%), Query Frame = 0 
Query:  131 GEKGTFSSFPSVATKSAQ-EDDGRGGR-ACPAMFRELVLIMDSTPLPEPRQKLPGLPEDFDPCALSGMDSTSSTVGTAALSPPRGGGDXXXXGRASDNGSMRWGCDLSQDFYLCRPFSPPRSSRLGRRGGSGGGFHRRTMSHGNRPRTFSEYTPG 283
            GE  T ++ PS    +A   DDGR    A PA+F +LVLI+D+  LP    KLP LPE+ D     G         T  LSP RG                   CDLS  F+L  P+SP +             + RR     NRPRTFSEY+ G
Sbjct:  105 GEVATAAAVPSGGVMAAAVPDDGRPETPATPAVFNDLVLILDAPALPPAPWKLPNLPEENDASCTGGT--------TTDLSPSRG-------------------CDLSPGFHLSAPWSPSKGRAR---------YDRRRSPVSNRPRTFSEYSAG 223
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2049.5307.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KVL7_9PHAE2.470e-936.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..355
NoneNo IPR availableTMHMMTMhelixcoord: 7..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2049contigH-paniculata_contig2049:6208..14099 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2049.5307.1mRNA_H-paniculata_contig2049.5307.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2049 6208..14366 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2049.5307.1 ID=prot_H-paniculata_contig2049.5307.1|Name=mRNA_H-paniculata_contig2049.5307.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=355bp
MAIIESLCAMFAAVGVLAWNAILTERRRRELRLHRSKSARECSRADRQDL
ADAAGAGSQEEEKVEETRLLEQLTDGVGASDGGAELRRVRSSPEALGTMP
CHSSSLPTSAIEEEQTTAVVAPQKEEKEKGGEKGTFSSFPSVATKSAQED
DGRGGRACPAMFRELVLIMDSTPLPEPRQKLPGLPEDFDPCALSGMDSTS
STVGTAALSPPRGGGDSSGGGRASDNGSMRWGCDLSQDFYLCRPFSPPRS
SRLGRRGGSGGGFHRRTMSHGNRPRTFSEYTPGNDDDSTAAAAVSSTTTI
GPGTQTECRRRRLPSGLDRMERSKSAVMVDIGMGPRRRGSASAPWGRRRG
GGGGV
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