mRNA_H-paniculata_contig2045.5299.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2045.5299.1 vs. uniprot
Match: D8LJM5_ECTSI (Kinesin family member 3A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJM5_ECTSI) HSP 1 Score: 444 bits (1143), Expect = 3.380e-137 Identity = 281/459 (61.22%), Postives = 317/459 (69.06%), Query Frame = 2
Query: 38 NNSEPVQVIVRIRPEPPSISSNPLVVARDERSVALLPLPAXXXXXMTKTKPITEMKTFTFDKVYHPRATQAEVYDFARPLIMSAVDGYNSTIFAYGHTGSGKTHTMMGTSTQPGMTPRAVQEMFNMIRRMAAREPDTIFIVRMSYVELYNNQFRNLLEGSQRGEDN---------GWGNSVXXXXXXXXXRGGWMGEADSVTEGPSLRSSWRSMNGTTTTATLXXXXXXXXXXXXXXXXXXHLASRSFDGSLASLAASSGKASNR-------------------TAVAARTGKIEVRECPEAGVFLSGPGLRRAVTSAEEALRLVSKGDATRATAATDCNEHSSRSHAILSFHRLSLSGSEGKRLNETQNINLSLSSLGNVLACLSRNATIIARRSTSTVDGAGTG-----------ETVAPVPYRSSKLTHFLKDSLGGNSKTLMVTTLRSTAMYHRQ 1297
+NSEPVQVIVR+RPEP S+ P+VVARDERSVALLP XXXXX K KP + KTFTFDKV+ P+A+QAEVY+ ARPL++SAVDGYNSTIFAYGHTGSGKTHTMMGT +QPGMTPRAVQ+MF +IR+MAARE DT+FIVRMSYVELYNN+FRNLLEG G+ G+G+S+ RG W AD+ E SL SSWRS TA+ +SRS G A+ AA G +S T A R KIEVRE PEAGVFLSGPGLRRAVTS EEALRLV++GD RA ATDCN+HSSRSHAILS RLSLSGSEGKRL ETQNINL LSSLG+VLACLS+NATI++RR++ G G E APVPYR+SKLTHFLKDSLGGNSKTLMVTTLRSTA YHRQ
Sbjct: 11 SNSEPVQVIVRVRPEP-GASAAPVVVARDERSVALLPXXXXXXXXTGKAKPAVDTKTFTFDKVFPPQASQAEVYEVARPLVLSAVDGYNSTIFAYGHTGSGKTHTMMGTPSQPGMTPRAVQDMFALIRQMAAREQDTMFIVRMSYVELYNNRFRNLLEGGGGGDXXXXXXXXXXVGFGSSIGSG------RGSWREAADA--EVSSLSSSWRS------TASPPG------------------SSRSLCGGAAAAAAGRGLSSXXXXXXXXXXXXXQRRAAAAATVAAGRNAKIEVRESPEAGVFLSGPGLRRAVTSGEEALRLVARGDEVRAVGATDCNQHSSRSHAILS-ERLSLSGSEGKRLYETQNINLCLSSLGDVLACLSKNATIMSRRNSRNDSGGHAGXXXXXXXXXXXENAAPVPYRNSKLTHFLKDSLGGNSKTLMVTTLRSTAAYHRQ 435
BLAST of mRNA_H-paniculata_contig2045.5299.1 vs. uniprot
Match: F0YE27_AURAN (Kinesin-like protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YE27_AURAN) HSP 1 Score: 221 bits (564), Expect = 1.360e-65 Identity = 155/393 (39.44%), Postives = 195/393 (49.62%), Query Frame = 2
Query: 203 KTFTFDKVYHPRATQAEVYDFARPLIMSAVDGYNSTIFAYGHTGSGKTHTMMGTSTQPGMTPRAVQEMFNMIRRMAAREPDTIFIVRMSYVELYNNQFRNLLEGSQRGEDNGWGNSVXXXXXXXXXRGGWMGEADSVTEGPSLRSSWRSMNGTTTTATLXXXXXXXXXXXXXXXXXXHLASRSFDGSLASLAASSGKASNRTAVAARTGKIEVRECPEAGVFLSGP-GLRRAVTSAEEALRLVSKGDATRATAATDCNEHSSRSHAILSFH---------------------------RLSLSGSEGKRLNETQNINLSLSSLGNVLACLSRNATIIARRSTSTVDGAGTGETVAPVPYRSSKLTHFLKDSLGGNSKTLMVTTLRSTAMYHRQ 1297
K+FT D V PR+ Q +VY+ RPL +S VDGYN+T+FAYGHTGSGKTHTM GT+ +PG+TPRAV+++F I R A RE +F+V +SYVELYNN FRNLLE D PS GKIE+RE ++G+FL GP L+ V S + LV+ GD R A+T+CNEHSSRSH +L+ H R+++SG+EG+ L E QNINLSL+ LG+VLA LSRNAT +S + PVPYR+SKLTH LKDSLGGNSKTLM+T LR+ Y+RQ
Sbjct: 4 KSFTVDGVLGPRSRQDDVYEHVRPLALSVVDGYNATVFAYGHTGSGKTHTMTGTAREPGVTPRAVRDVFGAIERAARRE-SAVFLVHVSYVELYNNVFRNLLE-------------------------------DRHDHAPSQ-----------------------------------------------------------------GKIEIRESRDSGIFLGGPPNLKVPVKSERDVRDLVAFGDRQRQYASTNCNEHSSRSHCVLTLHVESRWTESNRHSCRLGKLNLVDLAGSERVAVSGAEGETLVEAQNINLSLALLGDVLAALSRNATRPKSQSPRPPE---------PVPYRNSKLTHLLKDSLGGNSKTLMITNLRAHRDYYRQ 290
BLAST of mRNA_H-paniculata_contig2045.5299.1 vs. uniprot
Match: A0A7S4E6T1_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E6T1_9STRA) HSP 1 Score: 234 bits (598), Expect = 2.000e-64 Identity = 175/454 (38.55%), Postives = 224/454 (49.34%), Query Frame = 2
Query: 47 EPVQVIVRIRPEPPSISSNPLVVARDERSVALL-PLPAXXXXXMTKTKPITEMKTFTFDKVYHPRATQAEVYDFARPLIMSAVDGYNSTIFAYGHTGSGKTHTMMGTSTQPGMTPRAVQEMFNMIRRMAAREPDTIFIVRMSYVELYNNQFRNLLEGSQRGEDNGWGNSVXXXXXXXXXRGGWMGEADSVTEGPSLRSSWRSMNGTTTTATLXXXXXXXXXXXXXXXXXXHLASRSFDGSLASLAASSGKASNRTAVAARTGKIEVRECPEAGVFLSGPG-LRRAVTSAEEALRLVSKGDATRATAATDCNEHSSRSHAILSFH-----------------------------------RLSLSGSEGKRLNETQNINLSLSSLGNVLACLSRNATIIARRSTSTVDGAGTGETVAPVPYRSSKLTHFLKDSLGGNSKTLMVTTLRSTAMYHRQ 1297
E V+VI RIRPEP S+ + + V L P + +P T + FT D+V P++ QA+VY+ +PL+ SA GYN+T+FAYGHTGSGKTHTM G + QPG+TPRAV+E+F I A R D +F+V +SYVELYNNQFRNLL+ GN H +S + KIE+RE + GVFL+GP L+ AVTS +E L+S GD RA A T CN+HSSRSH IL+ H R+SLSG++G+ L E QNINLSL+ LG+VLA LSRN+ + + T G+ E PVPYR+SKLT+ LKDSLGGNSKTLM+TTLRS+ Y+RQ
Sbjct: 27 EHVRVIARIRPEPSSVRGCGCLRVTSDTCVELCQPDGVRAQSHSKRGRPRTRL--FTLDRVLGPQSVQADVYEHVKPLVHSAAHGYNATVFAYGHTGSGKTHTMTGDNVQPGVTPRAVRELFAAIEH-ATRTKDAVFLVHVSYVELYNNQFRNLLDDV--------GNHC------------------------------------------------------------HASSST--------------------------KIEIRESRDTGVFLTGPSNLKVAVTSEQEVQELISLGDKARAYALTRCNDHSSRSHCILTLHVQSQRASIALQDPQNAALTSVHVGKLNLVDLAGSERVSLSGAQGETLVEAQNINLSLALLGDVLAALSRNS-LRGEQGTQFPRSGGSRE---PVPYRNSKLTYLLKDSLGGNSKTLMITTLRSSETYYRQ 379
BLAST of mRNA_H-paniculata_contig2045.5299.1 vs. uniprot
Match: A0A2R5G630_9STRA (Kinesin-like protein KIF3A n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G630_9STRA) HSP 1 Score: 201 bits (511), Expect = 6.880e-53 Identity = 147/395 (37.22%), Postives = 192/395 (48.61%), Query Frame = 2
Query: 203 KTFTFDKVYHPRATQAEVYDFARPLIMSAVDGYNSTIFAYGHTGSGKTHTMMGTSTQPGMTPRAVQEMFNMIRRMAAREPDTIFIVRMSYVELYNNQFRNLLEGSQRGEDNGWGNSVXXXXXXXXXRGGWMGEADSVTEGPSLRSSWRSMNGTTTTATLXXXXXXXXXXXXXXXXXXHLASRSFDGSLASLAASSGKASNRTAVAARTGKIEVRECPEAGVFLSG-PGLRRAVTSAEEALRLVSKGDATRATAATDCNEHSSRSHAILSFH-----------------------------RLSLSGSEGKRLNETQNINLSLSSLGNVLACLSRNATIIARRSTSTVDGAGTGETVAPVPYRSSKLTHFLKDSLGGNSKTLMVTTLRSTAMYHRQ 1297
+TF FD+++ P Q +VY PL+ S + GYN+TIFAYG TGSGKTHT+ G G+ PRAV +F + +A RE D I +V+M YVELYNNQF++LL S + G +S A+++ + + +IE+ VFLSG P L VTSA+EALRL+ G RA ATDCNEHSSRSHAIL+F+ RL+LS +EG+ L ETQNINLSLS+LG+VL+ LSR + + S + A T A VPYR+SKLT LKDSLGGNSKTLM+ T+R+ +Y +Q
Sbjct: 81 RTFHFDRIFGPETAQEDVYAAVDPLVASTIKGYNATIFAYGSTGSGKTHTISGAPGCEGIIPRAVHRIFALAGELADREADGIVLVQMGYVELYNNQFKDLLY-----------------------------------------------------------------------------SHAQHGDASSSASTAXXXXXXXXXXSTSHRIELHTTKSGSVFLSGTPSLHTPVTSAQEALRLIQLGSRNRAVGATDCNEHSSRSHAILTFYVESRIPSANGATSVAKLGKLHLVDLAGSERLTLSKAEGQTLTETQNINLSLSTLGDVLSALSR---LHSSGSKAGSRRAATAADRACVPYRNSKLTFLLKDSLGGNSKTLMIATIRTPDLYQQQ 395
BLAST of mRNA_H-paniculata_contig2045.5299.1 vs. uniprot
Match: A0A835Z8L1_9STRA (Kinesin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8L1_9STRA) HSP 1 Score: 175 bits (444), Expect = 1.650e-47 Identity = 145/445 (32.58%), Postives = 201/445 (45.17%), Query Frame = 2
Query: 47 EPVQVIVRIRPEPPSISSNPLVVARDE----------RSVALLPLPAXXXXXMTKTKPITEMKT--FTFDKVYHPRATQAEVYDFARPLIMSAVDGYNSTIFAYGHTGSGKTHTMMGTSTQPGMTPRAVQEMFNMIRRMAAREPD-TIFIVRMSYVELYNNQFRNLLEGSQRGEDNGWGNSVXXXXXXXXXRGGWMGEADSVTEGPSLRSSWRSMNGTTTTATLXXXXXXXXXXXXXXXXXXHLASRSFDGSLASLAASSGKASNRTAVAARTGKIEVRECPEAGVFLSG-PGLRRAVTSAEEALRLVSKGDATRATAATDCNEHSSRSHAILSFH----------------------RLSLSGSEGKRLNETQNINLSLSSLGNVLACLSRNATIIARRSTSTVDGAGTGETVAPVPYRSSKLTHFLKDSLGGNSKTLMVTTLR 1273
E + V VRIRPE +++ + ++ + D+ + + PA T + E T F FD+V+ + Q EV+ RPL+ +A DGY +T+FAYG TGSGKTHT+ GT GM PRAV + + ++ AA+ P TIF+V +S+VE+YNN F +LL + T+G KIE+RE P GV+L+G LR VT EEA++L+ +G RAT+ T+ NE SSRSHAIL+F R+ LSG+EG L E Q+INLSLS LG+VL+ LS+ +++ G + +PYR+SKLTH LKDSLGGN KTLMV +R
Sbjct: 2 EAICVAVRIRPEA-ALAGSSIITSSDDLVSCVRVADAANKVTIACPARACLGSTSQSVVAESATHEFIFDRVFDAASRQEEVFTLVRPLVNAAADGYVATVFAYGMTGSGKTHTISGTGGDVGMLPRAVSLLLDSLKADAAKGPQQTIFMVTISFVEIYNNTFVSLLSAPS-----------------------------ATTDGNQ-------------------------------------------------------------------KIEIRESPTRGVYLTGGTNLRLPVTCTEEAMQLIHRGMEKRATSCTNMNERSSRSHAILTFEVERSTASVRVGKLQLIDLAGSERVGLSGAEGSVLAEAQSINLSLSLLGDVLSALSKYHRAVSK-------GLASATERPFIPYRNSKLTHLLKDSLGGNCKTLMVCCIR 342
BLAST of mRNA_H-paniculata_contig2045.5299.1 vs. uniprot
Match: A0A482SMD0_9ARCH (Kinesin motor domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SMD0_9ARCH) HSP 1 Score: 149 bits (376), Expect = 5.360e-38 Identity = 123/357 (34.45%), Postives = 161/357 (45.10%), Query Frame = 2
Query: 44 SEPVQVIVRIRPE----------------------------------PPSISSNPLVVARDERSVALLPLPAXXXXXMTKTKPITEMKTFTFDKVYHPRATQAEVYDFARPLIMSAVDGYNSTIFAYGHTGSGKTHTMMGTSTQPGMTPRAVQEMFNMIRRMAAREPDTIFIVRMSYVELYNNQFRNLLEGSQRGEDNGWGNSVXXXXXXXXXRGGWMGEADSVTE--------GPSLRSSWRSMNGTTTTATLXXXXXXXXXXXXXXXXXXHLASRSFDGSLASLAASSGKASNRTAVAARTGKIEVRECPEAGVFLSGPGLRRAVTSAEEALRLVSKGDATRATAATDCNEHSSR 988
SEPVQV +RIRPE P ++S+ V A D+ ++ L+P K+ + K + FDKV+ ATQ E+Y+ +++ V GYN+TIFAYG TGSGK++TM G PG+ PRA+ ++F I + AA E D F VR+SYVELYNN FRNLLE + N + G + D + GPS S N + R F GS A + KIEVRE AGVFLSG LR VTSA EA +L++KG+ RATA+T+CNE SSR
Sbjct: 5 SEPVQVFLRIRPEFDETQTNNAKLTPEKMVKTTSYGNLVKVTTASMSPTTVST--CVTASDDHTIRLMP--PDGIYASRKSVSAVDDKIYHFDKVFSESATQEEIYESVAEQVLATVRGYNTTIFAYGVTGSGKSYTMTGNKAAPGVIPRAIGDIFKSIDK-AASESDVYFFVRLSYVELYNNTFRNLLEHVAKDHQN-----LGKTSNSNTSMSGLFPDLDDLDASAAYEAQFGPSFAYGRASSN---------------------------IPMRDFPGS-----------------ALKGEKIEVRESQSAGVFLSGTNLRFPVTSAVEAFQLIAKGNKYRATASTNCNEESSR 307
BLAST of mRNA_H-paniculata_contig2045.5299.1 vs. uniprot
Match: A0A5A8D404_CAFRO (Kinesin motor domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D404_CAFRO) HSP 1 Score: 152 bits (383), Expect = 3.840e-36 Identity = 141/436 (32.34%), Postives = 194/436 (44.50%), Query Frame = 2
Query: 197 EMKTFTFDKVYHPRATQAEVYDFARPLIMSAVDGYNSTIFAYGHTGSGKTHTMMG-------------TSTQPGMTPRAVQEMFNMIRRMAAREPDTIFIVRMSYVELYNNQFRNLLEGSQRGEDNGWGNSVXXXXXXXXXRGGWMGEADSVTEGPSLRSSWRSMNGTTTTATLXXXXXXXXXXXXXXXXXXHLASRSFDGSLASLAASSGKASNRTAVAARTG-KIEVRECPEAGVFLSG-PGLRRAVTSAEEALRLVSKGDATRATAATDCNEHSSRSHAILSF----------------------------------------------------HRLSLSGS--EGKRLNETQNINLSLSSLGNVLACLSRNATIIARRSTSTVDGAGTGETVAPVPYRSSKLTHFLKDSLGGNSKTLMVTTLRSTAMYHRQ 1297
E + F FD+V+ P ATQ +V+ RPL+ V GYN+T+ AYG TGSGKTH++MG G+ R V +F+ R+A R + F VR+SYVELYNN FR+LL S D+V + RS + NG A S ++ AA+SG+ N + +G KI +RE GVFL G P LR V+S + LRLV++G RA ATD N HSSRSHAI+ RLS+SG+ + RL ETQ+INLSL+ L +VL+ L+ + GT + VPYR+SKLT L+DSLGG+++T+M+ +R T+ ++RQ
Sbjct: 116 EARPFVFDRVFAPDATQTDVFAQVRPLVEGVVSGYNATVMAYGSTGSGKTHSIMGQGGIDAALESSGAVGPGSGVLARTVSALFS---RIADRAAEREFTVRLSYVELYNNNFRDLLHKS-------------------------AAAGDAVRAETTARSLADAFNG---------------------------ADADEATSSSASAAASGQPQNMADRDSPSGPKISIRESRSRGVFLEGSPTLRVPVSSVVDCLRLVAEGTRNRAVGATDLNAHSSRSHAIVIIDVESIAKDSADEDAXXXXXXXXXXVTASGRPRRRRRAPVRLGRLCVVDLAGSERLSMSGAWRDEARLAETQSINLSLTVLADVLSTLA--------------EAKGTAPVM--VPYRNSKLTFLLRDSLGGSARTVMLVHVRPTSPHYRQ 480
BLAST of mRNA_H-paniculata_contig2045.5299.1 vs. uniprot
Match: A0A5A8DZ16_CAFRO (Kinesin motor domain-containing protein n=5 Tax=Sar TaxID=2698737 RepID=A0A5A8DZ16_CAFRO) HSP 1 Score: 152 bits (383), Expect = 4.190e-36 Identity = 141/436 (32.34%), Postives = 194/436 (44.50%), Query Frame = 2
Query: 197 EMKTFTFDKVYHPRATQAEVYDFARPLIMSAVDGYNSTIFAYGHTGSGKTHTMMG-------------TSTQPGMTPRAVQEMFNMIRRMAAREPDTIFIVRMSYVELYNNQFRNLLEGSQRGEDNGWGNSVXXXXXXXXXRGGWMGEADSVTEGPSLRSSWRSMNGTTTTATLXXXXXXXXXXXXXXXXXXHLASRSFDGSLASLAASSGKASNRTAVAARTG-KIEVRECPEAGVFLSG-PGLRRAVTSAEEALRLVSKGDATRATAATDCNEHSSRSHAILSF----------------------------------------------------HRLSLSGS--EGKRLNETQNINLSLSSLGNVLACLSRNATIIARRSTSTVDGAGTGETVAPVPYRSSKLTHFLKDSLGGNSKTLMVTTLRSTAMYHRQ 1297
E + F FD+V+ P ATQ +V+ RPL+ V GYN+T+ AYG TGSGKTH++MG G+ R V +F+ R+A R + F VR+SYVELYNN FR+LL S D+V + RS + NG A S ++ AA+SG+ N + +G KI +RE GVFL G P LR V+S + LRLV++G RA ATD N HSSRSHAI+ RLS+SG+ + RL ETQ+INLSL+ L +VL+ L+ + GT + VPYR+SKLT L+DSLGG+++T+M+ +R T+ ++RQ
Sbjct: 116 EARPFVFDRVFAPDATQTDVFAQVRPLVEGVVSGYNATVMAYGSTGSGKTHSIMGQGGIDAALESSGAVGPGSGVLARTVSALFS---RIADRAAEREFTVRLSYVELYNNNFRDLLHKS-------------------------AAAGDAVRAETTARSLADAFNG---------------------------ADADEATSSSASAAASGQPQNMADRDSPSGPKISIRESRSRGVFLEGSPTLRVPVSSVVDCLRLVAEGTRNRAVGATDLNAHSSRSHAIVIIDVESIAKDSADEDAXXXXXXXXXXVTASGRPRRRRRAPVRLGRLCVVDLAGSERLSMSGAWRDEARLAETQSINLSLTVLADVLSTLA--------------EAKGTAPVM--VPYRNSKLTFLLRDSLGGSARTVMLVHVRPTSPHYRQ 480
BLAST of mRNA_H-paniculata_contig2045.5299.1 vs. uniprot
Match: A0A5A8CVH4_CAFRO (Kinesin motor domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CVH4_CAFRO) HSP 1 Score: 152 bits (383), Expect = 4.750e-36 Identity = 141/436 (32.34%), Postives = 194/436 (44.50%), Query Frame = 2
Query: 197 EMKTFTFDKVYHPRATQAEVYDFARPLIMSAVDGYNSTIFAYGHTGSGKTHTMMG-------------TSTQPGMTPRAVQEMFNMIRRMAAREPDTIFIVRMSYVELYNNQFRNLLEGSQRGEDNGWGNSVXXXXXXXXXRGGWMGEADSVTEGPSLRSSWRSMNGTTTTATLXXXXXXXXXXXXXXXXXXHLASRSFDGSLASLAASSGKASNRTAVAARTG-KIEVRECPEAGVFLSG-PGLRRAVTSAEEALRLVSKGDATRATAATDCNEHSSRSHAILSF----------------------------------------------------HRLSLSGS--EGKRLNETQNINLSLSSLGNVLACLSRNATIIARRSTSTVDGAGTGETVAPVPYRSSKLTHFLKDSLGGNSKTLMVTTLRSTAMYHRQ 1297
E + F FD+V+ P ATQ +V+ RPL+ V GYN+T+ AYG TGSGKTH++MG G+ R V +F+ R+A R + F VR+SYVELYNN FR+LL S D+V + RS + NG A S ++ AA+SG+ N + +G KI +RE GVFL G P LR V+S + LRLV++G RA ATD N HSSRSHAI+ RLS+SG+ + RL ETQ+INLSL+ L +VL+ L+ + GT + VPYR+SKLT L+DSLGG+++T+M+ +R T+ ++RQ
Sbjct: 1379 EARPFVFDRVFAPDATQTDVFAQVRPLVEGVVSGYNATVMAYGSTGSGKTHSIMGQGGIDAALESSGAVGPGSGVLARTVSALFS---RIADRAAEREFTVRLSYVELYNNNFRDLLHKS-------------------------AAAGDAVRAETTARSLADAFNG---------------------------ADAEEATSSSASAAASGQPQNMADRDSPSGPKISIRESRSRGVFLEGSPTLRVPVSSVVDCLRLVAEGTRNRAVGATDLNAHSSRSHAIVIIDVESIAKDSADEDAVAAAAATPGAVTASGRPRRRRRAPVRLGRLCVVDLAGSERLSMSGAWRDEARLAETQSINLSLTVLADVLSTLA--------------EAKGTAPVM--VPYRNSKLTFLLRDSLGGSARTVMLVHVRPTSPHYRQ 1743
BLAST of mRNA_H-paniculata_contig2045.5299.1 vs. uniprot
Match: Q8CGJ1_MOUSE (Kinesin-like protein (Fragment) n=16 Tax=Amniota TaxID=32524 RepID=Q8CGJ1_MOUSE) HSP 1 Score: 138 bits (348), Expect = 7.870e-33 Identity = 119/381 (31.23%), Postives = 163/381 (42.78%), Query Frame = 2
Query: 203 KTFTFDKVYHPRATQAEVYDF-ARPLIMSAVDGYNSTIFAYGHTGSGKTHTMMGTSTQPGMTPRAVQEMFNMIRRMAAREPDTIFIVRMSYVELYNNQFRNLLEGSQRGEDNGWGNSVXXXXXXXXXRGGWMGEADSVTEGPSLRSSWRSMNGTTTTATLXXXXXXXXXXXXXXXXXXHLASRSFDGSLASLAASSGKASNRTAVAARTGKIEVRECPEAGVFLSGPGLRRAVTSAEEALRLVSKGDATRATAATDCNEHSSRSHAILSF--------------------HRLSLSGSE--------GKRLNETQNINLSLSSLGNVLACLSRNATIIARRSTSTVDGAGTGETVAPVPYRSSKLTHFLKDSLGGNSKTLM 1258
KTFTFD V+ P + Q +VY+ ARP+I S ++GYN TIFAYG TG+GKT TM G PG+ ++ +A E DT F+VR+SY+E+YN + R+LL G+D +T ++EV+E P+ GV++ V +A++ R+++ G R+ AT+ NEHSSRSHAI + H + L+GSE G+RL E INLSLS+LGNV++ L VDG T VPYR+SKLT L+DSLGGNSKT+M
Sbjct: 59 KTFTFDTVFGPESKQLDVYNLTARPIIDSVLEGYNGTIFAYGQTGTGKTFTMEGVRAVPGLRGVIPNSFAHIFGHIAKAEGDTRFLVRVSYLEIYNEEVRDLL-----GKD------------------------------------------------------------------------------------------------QTQRLEVKERPDVGVYIKDLSAY-VVNNADDMDRIMTLGHKNRSVGATNMNEHSSRSHAIFTITIECSEKGVDGNMHVRMGKLHLVDLAGSERQAKTGATGQRLKEATKINLSLSTLGNVISAL--------------VDGKSTH-----VPYRNSKLTRLLQDSLGGNSKTMM 318 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2045.5299.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2045.5299.1 >prot_H-paniculata_contig2045.5299.1 ID=prot_H-paniculata_contig2045.5299.1|Name=mRNA_H-paniculata_contig2045.5299.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=430bp MMPSVNGNGSNNSEPVQVIVRIRPEPPSISSNPLVVARDERSVALLPLPAback to top mRNA from alignment at H-paniculata_contig2045:5418..22786+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2045.5299.1 ID=mRNA_H-paniculata_contig2045.5299.1|Name=mRNA_H-paniculata_contig2045.5299.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=17369bp|location=Sequence derived from alignment at H-paniculata_contig2045:5418..22786+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2045:5418..22786+ >mRNA_H-paniculata_contig2045.5299.1 ID=mRNA_H-paniculata_contig2045.5299.1|Name=mRNA_H-paniculata_contig2045.5299.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2580bp|location=Sequence derived from alignment at H-paniculata_contig2045:5418..22786+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |