prot_H-paniculata_contig2042.5293.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2042.5293.1
Unique Nameprot_H-paniculata_contig2042.5293.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length633
Homology
[Close]
BLAST of mRNA_H-paniculata_contig2042.5293.1 vs. uniprot
Match: D8LIH7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIH7_ECTSI)

HSP 1 Score: 222 bits (566), Expect = 1.960e-65
Identity = 121/167 (72.46%), Postives = 128/167 (76.65%), Query Frame = 0 
Query:   74 STLGVARDKDGGSLRALCQACHGSGEK-EPNKACVLVTIYRRESDLFALLLRERRDTT-----------VGSGVAKVGSGKLTVLCDMTLDDAVHLEPQSTPLVVKVVNTCGDRRAYLLEFGRAVDLNTFQRAFAAARGYFRQMLTLRTLVADSFWQGFSSGAGAPV 228
            S LGVAR+KD G+LRALCQ C  SGE  E  KACVLVTIYRRESDLFALLLRER D             +G G A   S  LTVLCDM+LDD VHLE QS PLVVKVVNTCG R AYLLEFGRA+DL TFQRAF +ARGYFRQMLTLRTLVADSFWQGF+SGAG P 
Sbjct:   19 SILGVAREKDEGALRALCQVCSASGEVGEARKACVLVTIYRRESDLFALLLRERHDAXXXXXXXXXXXXLGGGEAT--SAGLTVLCDMSLDDGVHLEMQSAPLVVKVVNTCGQRIAYLLEFGRAMDLATFQRAFTSARGYFRQMLTLRTLVADSFWQGFASGAGGPA 183
[Close]
BLAST of mRNA_H-paniculata_contig2042.5293.1 vs. uniprot
Match: A0A6H5JBN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBN9_9PHAE)

HSP 1 Score: 220 bits (561), Expect = 1.170e-64
Identity = 119/165 (72.12%), Postives = 125/165 (75.76%), Query Frame = 0 
Query:   74 STLGVARDKDGGSLRALCQACHGSGEK-EPNKACVLVTIYRRESDLFALLLRERRDTTVGS---------GVAKVGSGKLTVLCDMTLDDAVHLEPQSTPLVVKVVNTCGDRRAYLLEFGRAVDLNTFQRAFAAARGYFRQMLTLRTLVADSFWQGFSSGAGAPV 228
            S LGVAR+KD G+LRALCQ C  SGE  E  KACVLVTIYRRESDLFALLLRER                G  K  S  LTVLCDM+LDD VHLE QS PLVVKVVNTCG R AYLLEFGRA+DL TFQRAF +ARGYFRQMLTLRTLVADSFWQGF+SGAG P 
Sbjct:   20 SILGVAREKDDGALRALCQVCSTSGEVGEARKACVLVTIYRRESDLFALLLRERXXXXXXXXXXXXXXXRGGGKAASAGLTVLCDMSLDDGVHLEMQSAPLVVKVVNTCGQRIAYLLEFGRAMDLVTFQRAFTSARGYFRQMLTLRTLVADSFWQGFASGAGGPA 184
[Close]
BLAST of mRNA_H-paniculata_contig2042.5293.1 vs. uniprot
Match: A0A6H5J729_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J729_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 1.100e-14
Identity = 36/50 (72.00%), Postives = 41/50 (82.00%), Query Frame = 0 
Query:  579 TEDVCFLCKEGGDLVECDEGTDWSKKVKAKYASLGNPSPRPGQPYSCCGI 628
            TEDVCFLCKEGG+LVECDEGT WS++VK K  SLG P P PG  +SCCG+
Sbjct:   48 TEDVCFLCKEGGNLVECDEGTSWSRRVKLKLESLGKPLPAPGTAFSCCGV 97
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2042.5293.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LIH7_ECTSI1.960e-6572.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JBN9_9PHAE1.170e-6472.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J729_9PHAE1.100e-1472.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2042contigH-paniculata_contig2042:6563..22778 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2042.5293.1mRNA_H-paniculata_contig2042.5293.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2042 6544..22778 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2042.5293.1 ID=prot_H-paniculata_contig2042.5293.1|Name=mRNA_H-paniculata_contig2042.5293.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=633bp
MITSTFGARRLPVLDYIRGISVLIFAFKLQNRKRGKRERSSVYNCRARDT
FESVLLLCGTLSSFTKEEQSVMISTLGVARDKDGGSLRALCQACHGSGEK
EPNKACVLVTIYRRESDLFALLLRERRDTTVGSGVAKVGSGKLTVLCDMT
LDDAVHLEPQSTPLVVKVVNTCGDRRAYLLEFGRAVDLNTFQRAFAAARG
YFRQMLTLRTLVADSFWQGFSSGAGAPVRNEPHQPRGLALVPSPEDGGLR
SRIGAPGAGGTHSEVLAAEVSLTGLERGGGGQGQSMSPGQISYHRHQGRT
PSRHPAFPTAQTKSPRRRSNAAAAAAAAAAAAAATPESGDDSNSLLSWPS
VGDASGGVSAAGGGGGGGGGSGGGGGKKQNKPFSGPLPWKWPGQGHQDKA
ANKKYNMRFVERKRSCHRCHYTSERMRDSRGSHYTRFACPAGKPHAYCMK
CICNAFIGVEENDFSEGTRKWLCPFCEGFCPCARCARSREDKDKRGEGRV
YKEIIKDTRDEDTTKRGKADEEEECERPVPAKAGAGDYHKVDKVEALIHD
LPPPKLTHYEGLLTKYLQTLPSLERLPLTEDVCFLCKEGGDLVECDEGTD
WSKKVKAKYASLGNPSPRPGQPYSCCGIPDPQE
back to top