mRNA_H-paniculata_contig20414.5289.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig20414.5289.1 vs. uniprot
Match: UPI0014867E3D (uncharacterized protein LOC117707392 n=2 Tax=Muroidea TaxID=337687 RepID=UPI0014867E3D) HSP 1 Score: 317 bits (812), Expect = 2.870e-105 Identity = 177/229 (77.29%), Postives = 191/229 (83.41%), Query Frame = 1
Query: 1 ATEAVEGTALALQGINDIHGGHCLPAGVLRVRDRVTDNVLQEHLEYTTSLLVDETRDALHTTTTSQTTDCWLGDALDIVAKYLA--------------QTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 645
A+EAVEG ALAL+ ++ IHG L GVL VRD V D+VLQEHL++TT LL+DE D L TTT SQ D LGDALD+V + L+ QTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct: 152 ASEAVEGAALALESVHHIHGSDGLALGVLSVRDCVADHVLQEHLQHTTGLLIDEAGDTLDTTTPSQAADGRLGDALDVVPQDLSASASQNCKGMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 380
BLAST of mRNA_H-paniculata_contig20414.5289.1 vs. uniprot
Match: UPI00140F5013 (uncharacterized protein LOC117015086 n=1 Tax=Rhinolophus ferrumequinum TaxID=59479 RepID=UPI00140F5013) HSP 1 Score: 313 bits (802), Expect = 8.540e-104 Identity = 172/229 (75.11%), Postives = 192/229 (83.84%), Query Frame = 1
Query: 1 ATEAVEGTALALQGINDIHGGHCLPAGVLRVRDRVTDNVLQEHLEYTTSLLVDETRDALHTTTTSQTTDCWLGDALDIVAKYLA--------------QTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 645
A+EAV+G AL+L+G++ +HGG L GVLRV D V D+VLQEHL++T LLV+E RDAL ++T S+ D LGD LD+V ++ QTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct: 149 ASEAVQGAALSLEGVHHVHGGDRLALGVLRVGDGVPDHVLQEHLQHTAGLLVNEARDALDSSTPSEAPDRGLGDPLDVVPQHFTHSRNKTGDIMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 377
BLAST of mRNA_H-paniculata_contig20414.5289.1 vs. uniprot
Match: UPI001AEF6E3D (uncharacterized protein LOC121142140 n=3 Tax=Rodentia TaxID=9989 RepID=UPI001AEF6E3D) HSP 1 Score: 309 bits (792), Expect = 1.520e-102 Identity = 173/223 (77.58%), Postives = 186/223 (83.41%), Query Frame = 1
Query: 19 GTALALQGINDIHGGHCLPAGVLRVRDRVTDNVLQEHLEYTTSLLVDETRDALHTTTTSQTTDCWLGDALDIVAKYLA--------------QTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 645
G ALAL+ ++ +HGG L VL V D V D+VLQEHL++T LLVDE RDAL TTT+SQ D LGDALD+VA+ L QTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct: 136 GAALALERVDYVHGGDGLALSVLGVGDGVADHVLQEHLQHTAGLLVDEARDALDTTTSSQAADGGLGDALDVVAQNLTAPGRQSHKTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 358
BLAST of mRNA_H-paniculata_contig20414.5289.1 vs. uniprot
Match: A0A6L5CPT4_9INSE (Uncharacterized protein n=1 Tax=Ephemera danica TaxID=1049336 RepID=A0A6L5CPT4_9INSE) HSP 1 Score: 313 bits (802), Expect = 5.100e-102 Identity = 175/237 (73.84%), Postives = 188/237 (79.32%), Query Frame = 1
Query: 10 AVEGTALALQGINDIHGGHCLPAGVLRVRDRVTDNVLQEHLEYTTSLLVDETRDALHTTTTSQTTDCWLGDALDIVAKYLA-------------------------QTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 645
A +G LALQ ++D+HGG L GVL + D V D+VL+EHLE T LLVDE RD LH+TT SQT D LGD LD++AK LA QTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct: 276 ARQGATLALQSVDDVHGGDGLALGVLGIGDGVADHVLEEHLEDTAGLLVDEARDTLHSTTASQTADGGLGDTLDVIAKNLAMTLGASLAESLSSFAATGHTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 512
BLAST of mRNA_H-paniculata_contig20414.5289.1 vs. uniprot
Match: UPI0009A3486E (LOW QUALITY PROTEIN: uncharacterized protein LOC109910441 n=1 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A3486E) HSP 1 Score: 305 bits (782), Expect = 1.070e-100 Identity = 165/220 (75.00%), Postives = 184/220 (83.64%), Query Frame = 1
Query: 1 ATEAVEGTALALQGINDIHGGHCLPAGVLRVRDRVTDNVLQEHLEYTTSLLVDETRDALHTTTTSQTTDCWLGDALDIVAKYLA-----QTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 645
A E++E ALA Q ++ IHG L GVL V DR+ ++LQE+L++ TSLL+D+ RDAL T SQ D WL DALD++ ++ A QTA KSTGGKAPRKQLA KAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRL REIAQDFKTDLRFQGSAV+ALQE +EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct: 163 AAESIESAALAFQSVHHIHGSDRLALGVLSVGDRIPYHILQENLQHATSLLIDQARDALDPATASQAPDGWLRDALDVITEHFAMARTKQTAHKSTGGKAPRKQLANKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLGREIAQDFKTDLRFQGSAVMALQETSEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 382
BLAST of mRNA_H-paniculata_contig20414.5289.1 vs. uniprot
Match: A0A0R3NX76_DROPS (Uncharacterized protein n=2 Tax=Drosophila pseudoobscura pseudoobscura TaxID=46245 RepID=A0A0R3NX76_DROPS) HSP 1 Score: 305 bits (780), Expect = 1.520e-100 Identity = 168/233 (72.10%), Postives = 185/233 (79.40%), Query Frame = 1
Query: 25 ALALQGINDIHGGHCLPAGVLRVRDRVTDNVLQEHLEYTTSLLVDETRDALHTTTTSQTTDCWLGDALDIVAKYLA--------------------------QTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 645
AL+LQ I++IHG CLP G+ V D +TDNV Q+H +++TS LVDE+RD +T TTSQT D L D LD++ + LA QTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct: 139 ALSLQSIHNIHGCDCLPLGMFGVGDGITDNVFQKHFQHSTSFLVDESRDTFYTATTSQTADSGLRDTLDVITQNLAMTLSASLSQAFATFTTTRIVKMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 371
BLAST of mRNA_H-paniculata_contig20414.5289.1 vs. uniprot
Match: UPI001447504E (uncharacterized protein LOC117249587 n=1 Tax=Epinephelus lanceolatus TaxID=310571 RepID=UPI001447504E) HSP 1 Score: 301 bits (770), Expect = 5.890e-100 Identity = 164/208 (78.85%), Postives = 177/208 (85.10%), Query Frame = 1
Query: 37 QGINDIHGGHCLPAGVLRVRDRVTDNVLQEHLEYTTSLLVDETRDALHTTTTSQTTDCWLGDALDIVAKYLA-----QTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 645
+ ++ IHGG LP GVL V D VTD+VLQE LE+ LLVDET D LHT SQT D GD+LD++ + QTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ SAV+ALQE++EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct: 98 ESVHHIHGGDRLPLGVLGVGDGVTDDVLQEDLEHPAGLLVDETGDTLHTAAASQTADGGFGDSLDVITENFTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQESSEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 305
BLAST of mRNA_H-paniculata_contig20414.5289.1 vs. uniprot
Match: UPI000EAB012D (uncharacterized protein LOC101981304 n=2 Tax=Muroidea TaxID=337687 RepID=UPI000EAB012D) HSP 1 Score: 293 bits (750), Expect = 2.660e-96 Identity = 164/215 (76.28%), Postives = 181/215 (84.19%), Query Frame = 1
Query: 1 ATEAVEGTALALQGINDIHGGHCLPAGVLRVRDRVTDNVLQEHLEYTTSLLVDETRDALHTTTTSQTTDCWLGDALDIVAKYLAQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 645
A++A++G ALAL+ ++ IHGG L VL V D V D+VLQEHL++T LLV+E D+L TT + Q D LD+ QTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct: 141 ASKAIQGAALALERVDHIHGGDGLTLSVLSVGDGVPDHVLQEHLQHTAGLLVNEAGDSLDTTASGQAAD----GGLDMARTK--QTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 349
BLAST of mRNA_H-paniculata_contig20414.5289.1 vs. uniprot
Match: UPI001EE9C0E7 (uncharacterized protein LOC124370291 n=3 Tax=Homalodisca vitripennis TaxID=197043 RepID=UPI001EE9C0E7) HSP 1 Score: 298 bits (762), Expect = 1.370e-95 Identity = 173/270 (64.07%), Postives = 187/270 (69.26%), Query Frame = 1
Query: 25 ALALQGINDIHGGHCLPAGVLRVRDRVTDNVLQEHLEYTTSLLVDETRDALHTTTTSQTTDCWLGDALDIVAKYLA---------------------------------------------------------------QTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 645
ALA + ++D+HGG LP GVL V D VTD+VLQ+HLE++ LLVDE RD L T SQTTDC LGDALD+V ++L QTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct: 277 ALAFERVHDVHGGDRLPLGVLGVCDGVTDHVLQKHLEHSAGLLVDEARDTLDTAAASQTTDCGLGDALDVVTEHLPVTLGASLSQPLTTFASTGHVAVAVALVKQMIKSPVLGSFVNSGCSGKNISHLARQADAMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 546
BLAST of mRNA_H-paniculata_contig20414.5289.1 vs. uniprot
Match: UPI000697DDBF (uncharacterized protein LOC102013159 n=1 Tax=Chinchilla lanigera TaxID=34839 RepID=UPI000697DDBF) HSP 1 Score: 291 bits (744), Expect = 3.950e-94 Identity = 163/221 (73.76%), Postives = 181/221 (81.90%), Query Frame = 1
Query: 1 ATEAVEGTALALQGINDIHGGHCLPAGVLRVRDRVTDNVLQEHLEYTTSLLVDETRDALHTTTTSQTTDC------WLGDALDIVAKYLAQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 645
A +A++ ALA + ++ +HG L VL V D VTD+VLQEHL+YT+ LLVDE D TT S+T +C LG ++A+ QTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRL REIAQDFKTDLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct: 225 AAKAIQSAALAFERVDHVHGSDRLALSVLGVGDSVTDDVLQEHLQYTSRLLVDEAGDPFDATTASETPNCRLYCPQLLGRNKGVMART-KQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLGREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 444 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20414.5289.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig20414.5289.1 >prot_H-paniculata_contig20414.5289.1 ID=prot_H-paniculata_contig20414.5289.1|Name=mRNA_H-paniculata_contig20414.5289.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=216bp ATEAVEGTALALQGINDIHGGHCLPAGVLRVRDRVTDNVLQEHLEYTTSLback to top mRNA from alignment at H-paniculata_contig20414:1254..2249+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig20414.5289.1 ID=mRNA_H-paniculata_contig20414.5289.1|Name=mRNA_H-paniculata_contig20414.5289.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=996bp|location=Sequence derived from alignment at H-paniculata_contig20414:1254..2249+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig20414:1254..2249+ >mRNA_H-paniculata_contig20414.5289.1 ID=mRNA_H-paniculata_contig20414.5289.1|Name=mRNA_H-paniculata_contig20414.5289.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1296bp|location=Sequence derived from alignment at H-paniculata_contig20414:1254..2249+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |