mRNA_H-paniculata_contig20403.5288.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig20403.5288.1 vs. uniprot
Match: A0A6H5J9R9_9PHAE (Pribosyltran_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9R9_9PHAE) HSP 1 Score: 259 bits (662), Expect = 2.960e-82 Identity = 135/161 (83.85%), Postives = 143/161 (88.82%), Query Frame = 1
Query: 1 AADIGRLLEVMGADRVIAVDLERPGTGSGGAFLGPGVPVETLLTTNIFAEHIAERIFGKNKEHPRG-----PSSGLVKKAIQFKRQLMLYVDDVRVQTFLHARPNSGPVDVTSNELMGNIAEVKGRDVVIVDELIDTGGTLGALPRRLRKAGAKVHAIFCC 468
+AD+GRLLEVMG DRVIAVDLERPGTGSGGAFLGPG+PVETLLTTNIFAEHIAERI GK+K H RG PSSGLVKKAIQFKR+L YVDDVRVQTFLHARPNSGPVDV+SNELMGNI EVKGRDVVIVDELIDTGGTL ALPRRL+KAGA I+ C
Sbjct: 258 SADVGRLLEVMGVDRVIAVDLERPGTGSGGAFLGPGIPVETLLTTNIFAEHIAERILGKDKSHQRGVTVISPSSGLVKKAIQFKRKLREYVDDVRVQTFLHARPNSGPVDVSSNELMGNIGEVKGRDVVIVDELIDTGGTLAALPRRLKKAGAM--NIYVC 416
BLAST of mRNA_H-paniculata_contig20403.5288.1 vs. uniprot
Match: D7FX99_ECTSI (Pribosyltran_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX99_ECTSI) HSP 1 Score: 229 bits (584), Expect = 1.790e-71 Identity = 123/156 (78.85%), Postives = 129/156 (82.69%), Query Frame = 1
Query: 1 AADIGRLLEVMGADRVIAVDLERPGTGSGGAFLGPGVPVETLLTTNIFAEHIAERIFGKNKEHPRGPSSGLVKKAIQFKRQLMLYVDDVRVQTFLHARPNSGPVDVTSNELMGNIAEVKGRDVVIVDELIDTGGTLGALPRRLRKAGAKVHAIFCC 468
AAD+GRLLEVMG DRVIAVDLERPGTGSGGAFLGPG+PVETLLTTNIF PSSGLVKKAIQFKR+L YVDDVRVQTFLHARPNSGPVDV+SNELMGNI EVKGRDVVIVDELIDTGGTLGALPRRL+KAGA I+ C
Sbjct: 200 AADVGRLLEVMGVDRVIAVDLERPGTGSGGAFLGPGIPVETLLTTNIF------------------PSSGLVKKAIQFKRKLREYVDDVRVQTFLHARPNSGPVDVSSNELMGNIGEVKGRDVVIVDELIDTGGTLGALPRRLKKAGAM--NIYVC 335
BLAST of mRNA_H-paniculata_contig20403.5288.1 vs. uniprot
Match: A0A835Z4X7_9STRA (N-terminal domain of ribose phosphate pyrophosphokinase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4X7_9STRA) HSP 1 Score: 151 bits (382), Expect = 2.080e-41 Identity = 86/165 (52.12%), Postives = 110/165 (66.67%), Query Frame = 1
Query: 1 AADIGRLLEVMGADRVIAVDLERPGTGSGGAFLGPGVPVETLLTTNIFAEHIAERIFGKNKEHPR---GPSSGLVKKAIQFKRQLMLYVD--DVRVQTFLHARPNSGPVDVTSNELMGNIAEVKGRDVVIVDELIDTGGTLGALPRRLRKAGAK------VHAIF 462
AAD G LEVMG DR+IAVDLERPG+ + F PGVPVETLLTTN+FA HIA F PSS L+KK++ F L + DVRV TF+H+ +GPVD+++NEL+ + +V+GRDVV+VDELIDTGGTL L R+L++ GA+ HA+F
Sbjct: 167 AADFGHCLEVMGVDRIIAVDLERPGSSNESNFFSPGVPVETLLTTNLFAHHIARAAFPPAHGGDILVVSPSSALMKKSVGFATVLARALPNADVRVTTFVHSTARAGPVDISTNELIAS-GDVRGRDVVLVDELIDTGGTLATLARKLKEMGARDIYVYSSHALF 330
BLAST of mRNA_H-paniculata_contig20403.5288.1 vs. uniprot
Match: A0A7S0SUR5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SUR5_9STRA) HSP 1 Score: 108 bits (270), Expect = 4.440e-25 Identity = 59/148 (39.86%), Postives = 89/148 (60.14%), Query Frame = 1
Query: 7 DIGRLLEVMGADRVIAVDLERPGTGSGGAFLGPGVPVETLLTTNIFAEHIAERIFGKNKEHPRGPSSGLVKKAIQFKRQLM-LYVDDVRVQTFLHARPNSGPVDVTSNELMGNIAEVKGRDVVIVDELIDTGGTLGALPRRLRKAGAK 447
D ++LE MG DRVIAVDL+RPG G F +P+ET++TT+ H+ I +N P++ VKKA F+ L ++ DV++ + SGP D++ ++++GN ++G DVVIVD++IDT GTL L +L+ GAK
Sbjct: 178 DFAKMLESMGIDRVIAVDLQRPGQGHEACFFDNTIPLETIITTDHMVSHLINNIPLQNPIVVVAPNAECVKKARSFQIGLQKVFKSDVQLAIYTSNESGSGPADISQSKMLGN-TRIEGADVVIVDDMIDTAGTLATLSNKLKLLGAK 324
BLAST of mRNA_H-paniculata_contig20403.5288.1 vs. uniprot
Match: A0A6T5N5G5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5N5G5_HETAK) HSP 1 Score: 108 bits (269), Expect = 9.110e-25 Identity = 65/162 (40.12%), Postives = 102/162 (62.96%), Query Frame = 1
Query: 1 AADIGRLLEVMGADRVIAVDLERPGTGSGGAFLGPGVPVETLLTTNIFAEHIAERIFGKNKEHPRGPSSGLVKKA----IQFKRQLMLYVDDVRVQTFLHARPNSGPVDVTSN--ELMGNIAEVKGRDVVIVDELIDTGGTLGALPRRLRKAGAKVHAIFCC 468
++D ++LEV+G DRVIAVDL+RPG G F P +PVET++TT + A+++A+R+ P+S +KKA ++F++++++ + FL + +SGPV TS E MG +V+G+DVVIV++L+DTG T + R+LR AGA I+ C
Sbjct: 203 SSDFAKMLEVVGVDRVIAVDLQRPGQGHEACFFSPQIPVETIMTTEMAAKYMAKRMHFPRPVCVVAPNSETIKKARKFELKFRKRVLV---PTSLGAFLPKQASSGPVAPTSKAFEFMG---DVEGKDVVIVEDLVDTGATCVEMARQLRAAGAA--DIYVC 356
BLAST of mRNA_H-paniculata_contig20403.5288.1 vs. uniprot
Match: A0A067C1X5_SAPPC (Pribosyltran_N domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C1X5_SAPPC) HSP 1 Score: 91.3 bits (225), Expect = 1.210e-18 Identity = 57/149 (38.26%), Postives = 85/149 (57.05%), Query Frame = 1
Query: 1 AADIGRLLEVMGADRVIAVDLERPGTGSGGAFLGPGVPVETLLTTNIFAEHIAERIFGKNKEHPRGPSSGLVKKAIQFKRQLMLYVDDVRVQTFLHARPNSGPVDVTSNELMGNIAEVKGRDVVIVDELIDTGGTLGALPRRLRKAGAK 447
A DI ++LEVMG DRVIAVDL+ G G +F +PVETL T E+ A ++F K P+ VKKA F+R L ++ D+ + TF A G D + + + +VKG +V++VD+++DT GTL L +++ GA+
Sbjct: 189 AQDIAKMLEVMGVDRVIAVDLQLRGQGHEASFFNAHIPVETLDTVMAGVEYFATQVFFKGPIVVLAPNPECVKKARVFQRGLKKWLPDIPI-TF--ASCIRGGADGDKPDEIQLVGDVKGAEVIVVDDMVDTSGTLCKLAAIVKEQGAR 334
BLAST of mRNA_H-paniculata_contig20403.5288.1 vs. uniprot
Match: A0A024UX13_9STRA (Pribosyltran_N domain-containing protein n=10 Tax=Aphanomyces TaxID=100860 RepID=A0A024UX13_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 1.680e-18 Identity = 53/149 (35.57%), Postives = 85/149 (57.05%), Query Frame = 1
Query: 1 AADIGRLLEVMGADRVIAVDLERPGTGSGGAFLGPGVPVETLLTTNIFAEHIAERIFGKNKEHPRGPSSGLVKKAIQFKRQLMLYVDDVRVQTFLHARPNSGPVDVTSNELMGNIAEVKGRDVVIVDELIDTGGTLGALPRRLRKAGAK 447
A DI ++LEVMG DRVIAVDL+ G G +F +PVETL T E+ A +++ K P+ VK+A F+R L ++ D+ + R + + +L+G +V+G +V++VD+++DT GTL L + ++ AGA+
Sbjct: 190 AQDIAKMLEVMGVDRVIAVDLQLRGQGHEASFFNTNIPVETLETVMAGVEYFATQVYFKGPIVVLAPNPECVKRARVFQRGLRKWLPDIPITFATCIRGGASGDEPDDIQLIG---DVQGAEVIVVDDMVDTSGTLVKLAKVVKDAGAR 335
BLAST of mRNA_H-paniculata_contig20403.5288.1 vs. uniprot
Match: K3WJY3_GLOUD (Pribosyltran_N domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WJY3_GLOUD) HSP 1 Score: 89.4 bits (220), Expect = 5.750e-18 Identity = 58/157 (36.94%), Postives = 88/157 (56.05%), Query Frame = 1
Query: 1 AADIGRLLEVMGADRVIAVDLERPGTGSGGAFLGPGVPVETLLTTNIFAEHIAERIFGKNKEHPRGPSSGLVKKAIQFKRQLMLYVDDV--RVQTFLHARPNSGPVDVTSNELMGNIAEVKGRDVVIVDELIDTGGTLGALPRRLRKAGAKVHAIFC 465
AADI ++LEVMG DRVIAVDL+ G +F VPVETL T E+ A ++ + P+ +++A F+ L ++ D R F+H N+G D T +++G +VKG DV+IVD++ID+G TL L + + GA+ ++C
Sbjct: 183 AADIAKMLEVMGVDRVIAVDLQLRMQGHEASFFSSNVPVETLETIMAGVEYFATQVHLRRPLVVMAPNPECLRRARVFQAGLNKWLPDAPARFAAFVHGTGNNG--DYTEADVVG---DVKGADVIIVDDMIDSGETLSKLTKLVLNKGAR--KVYC 332
BLAST of mRNA_H-paniculata_contig20403.5288.1 vs. uniprot
Match: A0A2D4BIU7_PYTIN (Heat shock protein 75 kDa, mitochondrial n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BIU7_PYTIN) HSP 1 Score: 87.8 bits (216), Expect = 3.340e-17 Identity = 57/157 (36.31%), Postives = 87/157 (55.41%), Query Frame = 1
Query: 1 AADIGRLLEVMGADRVIAVDLERPGTGSGGAFLGPGVPVETLLTTNIFAEHIAERIFGKNKEHPRGPSSGLVKKAIQFKRQLMLYVDDV--RVQTFLHARPNSGPVDVTSNELMGNIAEVKGRDVVIVDELIDTGGTLGALPRRLRKAGAKVHAIFC 465
AADIG++LEVMG DRVIAVDL+ F +PVET+ TT E+ A ++ + P+ +++A F+ + ++ D R F+H ++ VD E++G +V G DV++VD+LIDT TLG L R ++ GA+ I+C
Sbjct: 813 AADIGKMLEVMGVDRVIAVDLQLRSQAHEACFFSSHIPVETVDTTMAGVEYFATQVRLRRPLVVLSPNPECLRRARLFQSGINKWLPDTPARFAAFIHGAQDN--VDYKEAEIVG---DVNGADVIVVDDLIDTAETLGKLTRLAKEKGAR--KIYC 962
BLAST of mRNA_H-paniculata_contig20403.5288.1 vs. uniprot
Match: A0A5D6YPY6_9STRA (Pribosyltran_N domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YPY6_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 7.820e-17 Identity = 56/157 (35.67%), Postives = 86/157 (54.78%), Query Frame = 1
Query: 1 AADIGRLLEVMGADRVIAVDLERPGTGSGGAFLGPGVPVETLLTTNIFAEHIAERIFGKNKEHPRGPSSGLVKKAIQFKRQLMLYVDD--VRVQTFLHARPNSGPVDVTSNELMGNIAEVKGRDVVIVDELIDTGGTLGALPRRLRKAGAKVHAIFC 465
AADI ++LEVMG DRVIAVDL+ G +F VPVETL T E+ A ++ + P+ +++A F+ + ++ D R F+H +G D T +++G +VKG DV++VD+LID+G TL L + GA+ ++C
Sbjct: 194 AADIAKMLEVMGVDRVIAVDLQLRMQGHEASFFSSNVPVETLETIMAGVEYFATQVHLRRPLVILSPNPECLRRARVFQNGMNKWLPDSPARFAAFIHGTGANG--DYTEADIVG---DVKGADVIVVDDLIDSGETLAKLTKMAMNKGAR--KVYC 343 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20403.5288.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig20403.5288.1 >prot_H-paniculata_contig20403.5288.1 ID=prot_H-paniculata_contig20403.5288.1|Name=mRNA_H-paniculata_contig20403.5288.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=148bp MGADRVIAVDLERPGTGSGGAFLGPGVPVETLLTTNIFAEHIAERIFGKNback to top mRNA from alignment at H-paniculata_contig20403:410..3328+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig20403.5288.1 ID=mRNA_H-paniculata_contig20403.5288.1|Name=mRNA_H-paniculata_contig20403.5288.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2919bp|location=Sequence derived from alignment at H-paniculata_contig20403:410..3328+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig20403:410..3328+ >mRNA_H-paniculata_contig20403.5288.1 ID=mRNA_H-paniculata_contig20403.5288.1|Name=mRNA_H-paniculata_contig20403.5288.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=888bp|location=Sequence derived from alignment at H-paniculata_contig20403:410..3328+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |