prot_H-paniculata_contig204.5287.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig204.5287.1
Unique Nameprot_H-paniculata_contig204.5287.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length550
Homology
BLAST of mRNA_H-paniculata_contig204.5287.1 vs. uniprot
Match: D8LEM5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEM5_ECTSI)

HSP 1 Score: 307 bits (786), Expect = 5.560e-89
Identity = 196/366 (53.55%), Postives = 233/366 (63.66%), Query Frame = 0
Query:  194 GAGVWGGHQGGAAVLSRLAWDLDSPVS---GGRVNTRVEVAATTRSSEAPQGPARALRFTDDSEEVGGRGATTTASGPPLRQAPAVENGDMSPLPSLPKK--GDMFDEWTPSVSVSVPVVSPEPASGTFLPPES----EIAEGADARLAAVAAAAAVDPNQPGPA-PTTSARGDWAWFGDAPPGTPGLPALALKEAARCLCNLYACHGAPAAGGEAAAAADLPERLQPLATIGSILCQIWPPAAAILMRRLLGTWPTGSSKREVAYLRLIAGVTCAAPSVAVMCPGSRVPLMLFRRMAQCINSPNTKVAQEAAYLVQADFIVMSYLAPNRALMDLVTNALCANRGHWNADVRNASDQAFEVMLDFL 549
            G GVWG  QG A+    LAW+ ++ +    GG + T  +  A         G ARALRFT   E+VGG    T  +G  L  A   E    SP+ S      GD F+     + +     + E  S T   PE     E  E  D    + +   A    + G   P  SA G  A  G        LPA+ALKEA R LCNLYA HGAPAAG EAAA+AD PERLQPLA  GS LCQ+WPP++A+L+RRLLGTWP GS++REVAYLRLIAGV CAAP + V+CPGSR+PLMLFRR+A+CINS NTKVAQEAA+LVQADFI+M YLAP+R LMDLVTNALCANR HW+ADVRNASDQ F++MLDFL
Sbjct:  845 GDGVWG--QGMAS--KDLAWESEAGLGEEVGGDLRTATDGVA---------GAARALRFTAQEEDVGGDAEVTGDAGNWL--ASGRECSRESPVASAGAALAGDPFESGAGRLGLDEWPTAQEAKSST---PEKISAVEPVERMDGASVSGSRGDATGGQEAGTQQPLPSATGCTAAGGGGLALELDLPAVALKEATRSLCNLYASHGAPAAGAEAAASADAPERLQPLALAGSTLCQLWPPSSALLLRRLLGTWPAGSARREVAYLRLIAGVACAAPPLGVVCPGSRLPLMLFRRLAKCINSSNTKVAQEAAFLVQADFILMVYLAPDRRLMDLVTNALCANREHWSADVRNASDQTFDLMLDFL 1192          
BLAST of mRNA_H-paniculata_contig204.5287.1 vs. uniprot
Match: A0A2D4BM86_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BM86_PYTIN)

HSP 1 Score: 83.6 bits (205), Expect = 3.500e-13
Identity = 42/126 (33.33%), Postives = 69/126 (54.76%), Query Frame = 0
Query:  424 PPAAAILMRRLLGTWPTGSSKREVAYLRLIAGVTCAAPSVAVMCPGSRVPLMLFRRMAQCINSPNTKVAQEAAYLVQADFIVMSYLAPNRALMDLVTNALCANR-GHWNADVRNASDQAFEVMLDF 548
            P  A+ L+RRLL  WPT    +E+  +R+IA V   +P +  +     +P+ +F R+A+CI SP+T+VAQEA       F ++ +L     +  +++ A   N   HWN  +R  S+  F+  LD+
Sbjct:  547 PHVASDLLRRLLRCWPTRFPTQEIVAIRMIARVIMTSPPLHSIDGAEELPIQIFTRLAKCITSPHTQVAQEALAFTGCQFAMVHFLGEYEDIYKVISEAFHQNATSHWNEVIRTTSEGHFDRALDY 672          
BLAST of mRNA_H-paniculata_contig204.5287.1 vs. uniprot
Match: K3WXG7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WXG7_GLOUD)

HSP 1 Score: 83.2 bits (204), Expect = 4.860e-13
Identity = 43/128 (33.59%), Postives = 73/128 (57.03%), Query Frame = 0
Query:  424 PPAAAILMRRLLGTWPTGSSKREVAYLRLIAGVTCAAPSVAVMC--PGSRVPLMLFRRMAQCINSPNTKVAQEAAYLVQADFIVMSYLAPNRALMDLVTNALCANR-GHWNADVRNASDQAFEVMLDF 548
            P     L++RLL  WP+    +EV  +R++A V  ++P +  M   P + + + +F R+A+C+ SP+T+VAQEA       F+++ +LA    +  ++T A  AN   HWN  VR+ S+  F+  LD+
Sbjct:  582 PDVTVQLLQRLLANWPSKYPSQEVVAIRMVARVIMSSPPLHTMMNGPSANLHVKVFTRLARCVQSPHTQVAQEALAFTGCQFVMVHFLARYDDIYRVITEAFHANTVHHWNEAVRSTSEGHFDRALDY 709          
BLAST of mRNA_H-paniculata_contig204.5287.1 vs. uniprot
Match: A0A368RB10_SETIT (Serine/threonine protein phosphatase 2A regulatory subunit n=2 Tax=Setaria TaxID=4554 RepID=A0A368RB10_SETIT)

HSP 1 Score: 62.8 bits (151), Expect = 6.150e-7
Identity = 43/126 (34.13%), Postives = 70/126 (55.56%), Query Frame = 0
Query:  424 PPAAAILMRRLLGTWPTGSSKREVAYLRLIAGVTCAAPSVAVMCPGSRVPLMLFRRMAQCINSPNTKVAQEAAYLVQADFIVMSYLAPNR-ALMDLVTNALCAN-RGHWNADVRNASDQAFEVMLD 547
            P  A+ ++  LL  WP  +S++EV +L  I  V  A   V       +  ++LFRR+A CINS + +VA+ A ++   D I+ S +A NR A++ +VT AL  N + HWN  V N +    +++ +
Sbjct:  182 PKLASSVILGLLRYWPITNSQKEVMFLSEIEEVLEATNMVEFQ----KCMVLLFRRIAHCINSSHFQVAERALFMWNNDHII-SLVAQNRQAIVPIVTPALEENIQNHWNVSVLNLTANVKKMLSE 302          
BLAST of mRNA_H-paniculata_contig204.5287.1 vs. uniprot
Match: K3XGX4_SETIT (Serine/threonine protein phosphatase 2A regulatory subunit n=10 Tax=Panicoideae TaxID=147369 RepID=K3XGX4_SETIT)

HSP 1 Score: 62.8 bits (151), Expect = 9.780e-7
Identity = 43/126 (34.13%), Postives = 70/126 (55.56%), Query Frame = 0
Query:  424 PPAAAILMRRLLGTWPTGSSKREVAYLRLIAGVTCAAPSVAVMCPGSRVPLMLFRRMAQCINSPNTKVAQEAAYLVQADFIVMSYLAPNR-ALMDLVTNALCAN-RGHWNADVRNASDQAFEVMLD 547
            P  A+ ++  LL  WP  +S++EV +L  I  V  A   V       +  ++LFRR+A CINS + +VA+ A ++   D I+ S +A NR A++ +VT AL  N + HWN  V N +    +++ +
Sbjct:  327 PKLASSVILGLLRYWPITNSQKEVMFLSEIEEVLEATNMVEFQ----KCMVLLFRRIAHCINSSHFQVAERALFMWNNDHII-SLVAQNRQAIVPIVTPALEENIQNHWNVSVLNLTANVKKMLSE 447          
BLAST of mRNA_H-paniculata_contig204.5287.1 vs. uniprot
Match: A0A6D2JL22_9BRAS (Serine/threonine protein phosphatase 2A regulatory subunit n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JL22_9BRAS)

HSP 1 Score: 60.1 bits (144), Expect = 6.990e-6
Identity = 39/119 (32.77%), Postives = 62/119 (52.10%), Query Frame = 0
Query:  430 LMRRLLGTWPTGSSKREVAYLRLIAGVTCAAPSVAVMCPGSRVPLMLFRRMAQCINSPNTKVAQEAAYLVQADFIVMSYLAPNRALMDLVTNALCAN-RGHWNADVRNASDQAFEVMLD 547
            ++R LL  WP  +S +EV +L  +  V  A  +        R  ++LFRR+A+C+NS + +VA+ A +L   D I        + +M +V  AL  N RGHWN  V++ +    +V  D
Sbjct:  334 VIRGLLKYWPVTNSSKEVMFLGELEEVLEATQAAEFQ----RCMVLLFRRIARCLNSSHFQVAERALFLWNNDHIRTLITQNYKVIMPIVFPALERNTRGHWNQAVQSLTINVRKVFSD 448          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig204.5287.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LEM5_ECTSI5.560e-8953.55Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A2D4BM86_PYTIN3.500e-1333.33Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
K3WXG7_GLOUD4.860e-1333.59Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A368RB10_SETIT6.150e-734.13Serine/threonine protein phosphatase 2A regulatory... [more]
K3XGX4_SETIT9.780e-734.13Serine/threonine protein phosphatase 2A regulatory... [more]
A0A6D2JL22_9BRAS6.990e-632.77Serine/threonine protein phosphatase 2A regulatory... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002554Protein phosphatase 2A, regulatory B subunit, B56PFAMPF01603B56coord: 415..546
e-value: 2.6E-14
score: 53.0
IPR002554Protein phosphatase 2A, regulatory B subunit, B56PANTHERPTHR10257SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT Bcoord: 424..547
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 401..548
e-value: 2.9E-15
score: 58.2
NoneNo IPR availablePANTHERPTHR10257:SF3SERINE/THREONINE-PROTEIN PHOSPHATASE 2A 56 KDA REGULATORY SUBUNIT DELTA ISOFORMcoord: 424..547
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 410..547

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig204contigH-paniculata_contig204:43127..45627 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig204.5287.1mRNA_H-paniculata_contig204.5287.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig204 41960..45813 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig204.5287.1 ID=prot_H-paniculata_contig204.5287.1|Name=mRNA_H-paniculata_contig204.5287.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=550bp
MSAEATAGNMHGLNSLSGDGGGVEEAAMMRGGGFPGGGQASCGDGKGGGE
ERQGGGLNSLGEVASVSVEPGAGLSPSAFGACSSTAASAAVENVEPESPT
TATGGDGGPTSFNASVCPGGGPATMSARGGDEWPQLSASPGGRRRRLSEL
SPSASSAPPAAVAAATTGTPGTPVKTLVGEESDGGDGGDGVVEGAGVWGG
HQGGAAVLSRLAWDLDSPVSGGRVNTRVEVAATTRSSEAPQGPARALRFT
DDSEEVGGRGATTTASGPPLRQAPAVENGDMSPLPSLPKKGDMFDEWTPS
VSVSVPVVSPEPASGTFLPPESEIAEGADARLAAVAAAAAVDPNQPGPAP
TTSARGDWAWFGDAPPGTPGLPALALKEAARCLCNLYACHGAPAAGGEAA
AAADLPERLQPLATIGSILCQIWPPAAAILMRRLLGTWPTGSSKREVAYL
RLIAGVTCAAPSVAVMCPGSRVPLMLFRRMAQCINSPNTKVAQEAAYLVQ
ADFIVMSYLAPNRALMDLVTNALCANRGHWNADVRNASDQAFEVMLDFL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002554PP2A_B56
IPR011989ARM-like
IPR016024ARM-type_fold