mRNA_H-paniculata_contig204.5286.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig204.5286.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 213 bits (541), Expect = 1.370e-64 Identity = 110/208 (52.88%), Postives = 135/208 (64.90%), Query Frame = 1
Query: 28 IDEAWFYLIRDRDRVRVFPEEERVRSTKVQHKSHVSKAMLIFAVSRPDLCRDFDGKIGIWRVYVIKQAQRNS----------ARHEWGQP-------------YEFDVTVDAEWYQEWYKDSFLLALKEKMPWLEGEEVVAQQDGATPHTRKDTPRKLNELGMDAGWNVNLVTQPTQSPDLNINDLGFFASLKSRVWRERYGTIDGLV 582
+DE+WFYL+R++++VRVF E+ +V H+SH+ K M+I A +RPD DFDGKIGIWR+ VI+ AQR+S R W +P YEFD T+DAEWY++WY D L A+KEKMPWL + VV QQDGA+PHT K P LN G+ GW V LVTQP QSPDLNINDLG FASLK RVW +ID LV
Sbjct: 157 LDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLGCFASLKPRVWGVNAFSIDELV 364
BLAST of mRNA_H-paniculata_contig204.5286.1 vs. uniprot
Match: A0A448ZNT1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZNT1_9STRA) HSP 1 Score: 123 bits (308), Expect = 4.260e-29 Identity = 81/220 (36.82%), Postives = 113/220 (51.36%), Query Frame = 1
Query: 1 FRSGFQTTQIDEAWFYLIRDRDRVRVFPEEERVRSTKVQHKSHVSKAMLIFAVSRP----DLCRDFDGKIGIWRVYVIKQAQRNSARHEWGQPYEFDVTVDAEWYQEWYKDSFLLALKEKMPWLEGE---EVVAQQDGATPHTRKDTPRK-LNELGMDAGWNVNLVTQPTQSPDLNINDLGFFASLKSRVWRERYGTIDGLVEGVKSTCDAYDTITLENV 636
F F+ IDE WFYL R + + P E +ST + K+H++K M + A +RP + C FDGKIGIW V + A+R+S G VD E Y+ + L A+ EK W G E+ Q+D A PH K T R+ + GWN+ + TQP SPD+N+ DLGFF S++S +++R ID L+ V+ D TL NV
Sbjct: 259 FDDWFKWIHIDEKWFYLKRTKQTTYLLPGEAEPKSTS-KSKNHMTKVMFLCATARPRWDTNNCAWFDGKIGIWPFVVKEPAKRSSVNRPKGTLVTKPQNVDGEVYKRMLLEKVLPAIYEK--WPRGSSTPEIFIQEDNAKPH--KATIREEVKAAAASKGWNITVKTQPPNSPDMNVLDLGFFNSIQSLQYKKRSKDIDHLIANVEEAFDECKRETLNNV 473
BLAST of mRNA_H-paniculata_contig204.5286.1 vs. uniprot
Match: I6THG9_PSEMU (Tranposase n=1 Tax=Pseudo-nitzschia multiseries TaxID=37319 RepID=I6THG9_PSEMU) HSP 1 Score: 120 bits (302), Expect = 2.230e-28 Identity = 77/219 (35.16%), Postives = 112/219 (51.14%), Query Frame = 1
Query: 1 FRSGFQTTQIDEAWFYLIRDRDRVRVFPEEERVRSTKVQHKSHVSKAMLIFAVSRP----DLCRDFDGKIGIWRVYVIKQAQRNSARHEWGQPYEFDV-TVDAEWYQEWYKDSFLLALKEKMP--WLEGEEVVAQQDGATPHTRKDTPRKLNELGMDAGWNVNLVTQPTQSPDLNINDLGFFASLKSRVWRERYGTIDGLVEGVKSTCDAYDTITLENV 636
F + T IDE WFYL + + E ST + K + K M + AV+RP D FDGKIGIW V + AQRNS G ++ +V+A YQ+ + L A++EK P W + + Q+D A PH + + E +AGWN+ + TQP SPD N+ DLGFFAS+++ +++R ID L+ V+ TI L ++
Sbjct: 226 FEDMYDTIHIDEKWFYLKTTNQKTYLCSGEPEPHST-CKSKRFIEKVMFLCAVARPRHDADRNAGFDGKIGIWPFVVKEPAQRNSVNRPRGTMVTKNIPSVNAAEYQKMMLEKVLPAIQEKFPVCW-KSRPIFIQEDNAKPHHLRSRAA-VREAAREAGWNITVTTQPPNSPDFNVLDLGFFASIQALQYKKRAKNIDQLIANVEEALVETSTIALNSI 441
BLAST of mRNA_H-paniculata_contig204.5286.1 vs. uniprot
Match: A0A024UI08_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UI08_9STRA) HSP 1 Score: 115 bits (287), Expect = 2.910e-27 Identity = 71/208 (34.13%), Postives = 103/208 (49.52%), Query Frame = 1
Query: 19 TTQIDEAWFYLIRDRDRVRVFPEEERVRSTKVQHKSHVSKAMLIFAVSRPDLC----RDFDGKIGIWRVYVIKQAQRNSARHEWGQPYEFDVTVDAEWYQEWYKDSFLLALKEKMPWLEGEEVVAQQDGATPHTRKDTPRKLNELGMDAGWNVNLVTQPTQSPDLNINDLGFFASLKSRVWRERYGTIDGLVEGVKSTCDAYDTITLE 630
T IDE WFY+ + R ++ +E V K Q K H+ K M + AV+RP + +DGKIG W +++ A RNS + G V V E Y+ + D + A+K + P + + QQD A PH D L G GW++ L QP+QSPD+N+ DLG F +++S TI+ LV V D D + L+
Sbjct: 34 TVHIDEKWFYISKVNRRYYLWNDEP-VPMRKCQSKRHLMKVMFLTAVARPRFDAHRRKSWDGKIGTWPFTMVRPALRNSKNFKRGDAITEPVVVTKEVYRSFLVDKVIPAIKSRWPGRRSKTIWVQQDSARPHVAVDDAPVL-AAGQSDGWDIRLCAQPSQSPDMNVLDLGLFNAIQSLQHHTASYTIEELVLAVSKAYDDLDPLVLD 239
BLAST of mRNA_H-paniculata_contig204.5286.1 vs. uniprot
Match: A0A6A4Z9D8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z9D8_9STRA) HSP 1 Score: 110 bits (276), Expect = 1.890e-25 Identity = 66/208 (31.73%), Postives = 108/208 (51.92%), Query Frame = 1
Query: 19 TTQIDEAWFYLIRDRDRVRVFPEEERVRSTKVQHKSHVSKAMLIFAVSRPDLC----RDFDGKIGIWRVYVIKQAQRNSARHEWGQPYEFDVTVDAEWYQEWYKDSFLLALKEKMPWLEGEEVVAQQDGATPHTRKDTPRKLNELGMDAGWNVNLVTQPTQSPDLNINDLGFFASLKSRVWRERYGTIDGLVEGVKSTCDAYDTITLE 630
T IDE WFY+ + R ++ +E V + K + K H++K M + AV+RP R +DG+IG+W + A R+S + G TV + Y+ + D + A++ K P + ++ QQD A PH + P + G GW ++L +QP QSPDLN+ DLG+F +++S + T+D LV V + + + L+
Sbjct: 44 TVHIDEKWFYVTKQNRRYYLWSDEA-VPTRKCRSKKHITKVMFLTAVARPRYDARNKRMWDGRIGMWPFVKTRPALRSSKNRKRGDDVTEPFTVTRDVYRSFLIDKVIPAVRSKWPSSKKNQIWIQQDNAKPHVSVNDPAVV-AAGRQGGWTISLCSQPAQSPDLNVLDLGYFNAIQSLQHQMATYTLDDLVVAVVKSFEELECTVLD 249
BLAST of mRNA_H-paniculata_contig204.5286.1 vs. uniprot
Match: W2PEH8_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2PEH8_PHYPN) HSP 1 Score: 109 bits (272), Expect = 2.460e-25 Identity = 68/205 (33.17%), Postives = 107/205 (52.20%), Query Frame = 1
Query: 34 EAWFYLIRDRDRVRVFPEEERVRSTKVQHKSHVSKAMLIFAVSRP----DLCRDFDGKIGIWRVYVIKQAQRNSARHEWGQPYEFDVTVDAEWYQEWYKDSFLLALKEKMPWLEGEEVVAQQDGATPHTRKDTPRKLNELGMDAGWNVNLVTQPTQSPDLNINDLGFFASLKSRVWRERYGTIDGLVEGVKSTCDAYDTITLENV 636
E WFYL ++ R + EE T V++K+++ K M + AV+RP R +DGKIG+W V + A+R+S G VD + Y+ + ++ K+ W G+ V Q D A PH D P + D GW++++ QP SPD N+NDLGFFAS++S +++ TI+ LV V+ + + T++ V
Sbjct: 22 EKWFYLKKENQRFYLGTHEEPPHLT-VKNKNYIVKVMFLVAVARPRWDSKRHRIWDGKIGLWPFVVYEPAERSSKNRPAGTLELKTYNVDKDVYR--HALCRMVIPSVKVVWPSGKRVFLQHDNAKPHVAADDPEVVAACS-DGGWDMSIKPQPANSPDFNVNDLGFFASIQSLQHKKKARTIEDLVNNVEEAYNQLEYSTIDKV 222
BLAST of mRNA_H-paniculata_contig204.5286.1 vs. uniprot
Match: A0A6P6WTE4_COFAR (uncharacterized protein LOC113735852 n=1 Tax=Coffea arabica TaxID=13443 RepID=A0A6P6WTE4_COFAR) HSP 1 Score: 108 bits (269), Expect = 4.370e-25 Identity = 70/214 (32.71%), Postives = 116/214 (54.21%), Query Frame = 1
Query: 13 FQTTQIDEAWFYLIRDRDRVRVFPEEERVRSTKVQHKSHVSKAMLIFAVSRP----DLCRDFDGKIGIWRVYVIKQAQRNSARHEWGQPYEFD--VTVDAEWYQEWYKDSFLLALKEKMPWLEGEEVVAQQDGATPHTRKDTPRKLNELGMDAGWNVNLVTQPTQSPDLNINDLGFFASLKSRVWRERYGTIDGLVEGVKSTCDAYDTITLENV 636
F +DE WFY+ ++ +R + EEE+ T + K ++K M + A++RP R+FDGKIGI+ +V+K+ + ++++ E ++V Y+ + L A+ K P G E+ QQD A PHT + + MD G++++LV QP SPD+N+ DLG+F +++S +E TID L+ V+ + D T +L NV
Sbjct: 2 FNVVHVDEKWFYMTKESERYYLHLEEEQPLRT-CKSKKFIAKVMFLVAIARPRFDCSYYREFDGKIGIF-PFVLKEPAKRNSKNRIADALETKSILSVTKGVYRICLIEKVLPAICSKWPRENGTEIFIQQDNAKPHTNPMDSKFIEADWMD-GFDIHLVFQPPNSPDMNVLDLGYFRAIQSLQHQEAPKTIDELLLAVEKSFDQLSTESLNNV 212
BLAST of mRNA_H-paniculata_contig204.5286.1 vs. uniprot
Match: A0A6P6TC35_COFAR (uncharacterized protein LOC113699851 n=2 Tax=Coffea TaxID=13442 RepID=A0A6P6TC35_COFAR) HSP 1 Score: 105 bits (263), Expect = 1.870e-24 Identity = 68/214 (31.78%), Postives = 116/214 (54.21%), Query Frame = 1
Query: 13 FQTTQIDEAWFYLIRDRDRVRVFPEEERVRSTKVQHKSHVSKAMLIFAVSRP----DLCRDFDGKIGIWRVYVIKQAQRNSARHEWGQPYEFD--VTVDAEWYQEWYKDSFLLALKEKMPWLEGEEVVAQQDGATPHTRKDTPRKLNELGMDAGWNVNLVTQPTQSPDLNINDLGFFASLKSRVWRERYGTIDGLVEGVKSTCDAYDTITLENV 636
F +DE WFY+ ++ + PEE++ T + K ++ M + AV+R R+FDGKIGI+ +V+K++ + ++++ E ++V E Y++ + LLA+ K P G E+ QQD A PH + + MD G++++L+ QP SPD+N+ DLG+F +++S +E TID L+ V+ + D T +L NV
Sbjct: 2 FNVVHVDEKWFYMTKESKMYYLHPEEKQPLRT-CKSKKFIANVMFLAAVARLRFDCSYYREFDGKIGIF-PFVLKESTKRNSKNWIAGTLETKPILSVAKEVYRKCLIEKVLLAICSKWPRENGTEIFIQQDNAKPHINPIDSKFIEAASMD-GFDIHLLFQPPNSPDMNVLDLGYFRAIQSLQHQEAPKTIDELILAVEKSFDQLSTESLNNV 212
BLAST of mRNA_H-paniculata_contig204.5286.1 vs. uniprot
Match: A0A6A4Z066_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z066_9STRA) HSP 1 Score: 105 bits (262), Expect = 3.940e-24 Identity = 72/208 (34.62%), Postives = 102/208 (49.04%), Query Frame = 1
Query: 13 FQTTQIDEAWFYLIRDRDRVRVFPEEERVRSTKVQHKSHVSKAMLIFAVSRPDLCRDFDGKIGIWRVYVIKQAQRNSARHEWGQPYEFDVTVDAEWYQEWYKDSFLLALKEKMPWLEGEEVVAQQDGATPHTRKDTPRKLNELGMDAGWNVNLVTQPTQSPDLNINDLGFFASLKSRVWRERYGTIDGLVEGVKSTCDAYDTITLENV 636
+ +DE WF +D +V + EE +R T + K + K M + AV RP FDGKIGIW A RNS G V VD Y+++ + + A+KEK P + + VV Q D ATPH D L ++ D GW + QP SPDLN+ DLGFFAS++S ++ ++D ++ D + L NV
Sbjct: 2 WDVVHLDEKWFNADKDCRKVYLVDGEEVLRRT-CKSKRFIPKVMFLCAVGRPRQADGFDGKIGIWPFVSKTPAVRNSRNRPAGTMVTTLVNVDGATYRDYVLNKVVPAIKEKFPSV-SKRVVLQHDNATPHRSIDDAA-LAQVSTD-GWTFVVRRQPPNSPDLNVLDLGFFASIQSLQYKVVSRSVDDVIASTLMAFDMLNDEKLANV 205
BLAST of mRNA_H-paniculata_contig204.5286.1 vs. uniprot
Match: A0A6A4Z8Y7_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4Z8Y7_9STRA) HSP 1 Score: 105 bits (262), Expect = 5.020e-24 Identity = 76/213 (35.68%), Postives = 108/213 (50.70%), Query Frame = 1
Query: 13 FQTTQIDEAWFYLIRDRDRVRVFP-EEERVRSTKVQHKSHVSKAMLIFAVSRP--DLCRD--FDGKIGIWRVYVIKQAQRNSARHEWGQPYEFDVTVDAEWYQEWYKDSFLLALKEKMPWLEGEEVVAQQDGATPHTRKDTPRKLNELGMDAGWNVNLVTQPTQSPDLNINDLGFFASLKSRVWRERYGTIDGLVEGVKSTCDAYDTITLENV 636
+ +DE WF +DR + + P E R RS K K ++ K M + AV+RP D+ R FDGK+G+W + A RNS G V VDA Y+++ + + A+K P + VV Q D ATPH T R L + D GW + QP SPDLN+ DLGFFAS++S ++ T+D ++ + DA + LE V
Sbjct: 57 WDVVHLDEKWFNADKDRRKTYLVPGETPRHRSWK--SKRYIPKVMFLAAVARPRYDVARGAFFDGKVGMWPFVRLAPAVRNSRNRRAGTMVTKLVNVDAAVYRDFVINKVVPAIKASFP-SASKRVVLQHDNATPHGSV-TDRDLEAVSSD-GWTFVVRAQPPNSPDLNVLDLGFFASIQSLQYKTMSRTVDDVIRSTLAAFDALCSDKLECV 264 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig204.5286.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig204.5286.1 >prot_H-paniculata_contig204.5286.1 ID=prot_H-paniculata_contig204.5286.1|Name=mRNA_H-paniculata_contig204.5286.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=213bp FRSGFQTTQIDEAWFYLIRDRDRVRVFPEEERVRSTKVQHKSHVSKAMLIback to top mRNA from alignment at H-paniculata_contig204:39439..40077+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig204.5286.1 ID=mRNA_H-paniculata_contig204.5286.1|Name=mRNA_H-paniculata_contig204.5286.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=639bp|location=Sequence derived from alignment at H-paniculata_contig204:39439..40077+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig204:39439..40077+ >mRNA_H-paniculata_contig204.5286.1 ID=mRNA_H-paniculata_contig204.5286.1|Name=mRNA_H-paniculata_contig204.5286.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1278bp|location=Sequence derived from alignment at H-paniculata_contig204:39439..40077+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |