prot_H-paniculata_contig20399.5282.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig20399.5282.1
Unique Nameprot_H-paniculata_contig20399.5282.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length157
Homology
BLAST of mRNA_H-paniculata_contig20399.5282.1 vs. uniprot
Match: A0A6H5L269_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L269_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 8.610e-38
Identity = 74/140 (52.86%), Postives = 95/140 (67.86%), Query Frame = 0
Query:    2 PMGTSGSPGAFQRLMAEVCKGLQCTQLYLDDIIVHSNSVKCHVADLKSFLERITTHDLKLSPKKAHLGALEITCVGHLITPHGVSPDSKRNNALIKMPMPSNRGELHSLLVSISYLRKFVLGLSKEIRELNHHLCHDVPF 141
            P G SGSP  FQ LMA+VC GL+  Q+YLDD+IV S +   HV  L+  L R    DLKLSPKKAH+G+ E+T +GHLITP G+ PD K+ +A+ KM MP  + EL S+L S+SYLRKF+  L++ I +L   L  DV F
Sbjct:  199 PQGCSGSPANFQSLMAKVCDGLRKIQVYLDDVIVPSLTAAEHVVQLRELLVRFKEFDLKLSPKKAHIGSAEVTFLGHLITPFGLHPDPKKTDAMAKMKMPKTKSELRSMLGSVSYLRKFLPNLARNITDLTALLKKDVHF 338          
BLAST of mRNA_H-paniculata_contig20399.5282.1 vs. uniprot
Match: A0A6H5K3K5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3K5_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 1.950e-36
Identity = 72/140 (51.43%), Postives = 94/140 (67.14%), Query Frame = 0
Query:    2 PMGTSGSPGAFQRLMAEVCKGLQCTQLYLDDIIVHSNSVKCHVADLKSFLERITTHDLKLSPKKAHLGALEITCVGHLITPHGVSPDSKRNNALIKMPMPSNRGELHSLLVSISYLRKFVLGLSKEIRELNHHLCHDVPF 141
            P G SGSP  FQ LMA+VC G +  Q+ LDD+IV S +V  HV  L+ FL R T  DL+LSPKKAH+G+ E+T +GHLITP G+ PD K+ +A+ KM MP  + EL S+  S+SYLRKF+  L++ I +L   L  D  F
Sbjct:  458 PQGCSGSPANFQSLMAKVCDGFKRIQVCLDDVIVPSLTVAEHVVQLREFLVRFTEFDLQLSPKKAHIGSAEVTFLGHLITPVGLQPDPKKTDAMAKMKMPKTKSELRSIFGSVSYLRKFLPNLARNITDLTALLKKDAHF 597          
BLAST of mRNA_H-paniculata_contig20399.5282.1 vs. uniprot
Match: A0A6H5KJH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH5_9PHAE)

HSP 1 Score: 137 bits (346), Expect = 1.070e-34
Identity = 69/130 (53.08%), Postives = 90/130 (69.23%), Query Frame = 0
Query:    2 PMGTSGSPGAFQRLMAEVCKGLQCTQLYLDDIIVHSNSVKCHVADLKSFLERITTHDLKLSPKKAHLGALEITCVGHLITPHGVSPDSKRNNALIKMPMPSNRGELHSLLVSISYLRKFVLGLSKEIREL 131
            P G SGSP   Q LMA+VC GL+  Q+YLDD+IV S +   H+  LK  L R T  +LKLSPKKAH+G+ E+T +GHLITP G+ PD K+ +A+ KM MP  + EL S+L S+SYLRKF   L++ I +L
Sbjct:   50 PQGCSGSPVNCQSLMAKVCDGLKRIQVYLDDVIVPSLTAAEHLVQLKELLVRFTEFELKLSPKKAHIGSAEVTFLGHLITPFGLHPDPKKTDAMAKMKMPKTKSELRSMLGSVSYLRKFRPNLARNITDL 179          
BLAST of mRNA_H-paniculata_contig20399.5282.1 vs. uniprot
Match: A0A6H5KZ45_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ45_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 2.990e-34
Identity = 70/140 (50.00%), Postives = 92/140 (65.71%), Query Frame = 0
Query:    2 PMGTSGSPGAFQRLMAEVCKGLQCTQLYLDDIIVHSNSVKCHVADLKSFLERITTHDLKLSPKKAHLGALEITCVGHLITPHGVSPDSKRNNALIKMPMPSNRGELHSLLVSISYLRKFVLGLSKEIRELNHHLCHDVPF 141
            P G  GSP  FQ LMA+VC GL+  ++YLDD+IV S +   HVA L+  L R T  DLKLSPKKAH+G+ E+T +G LITP GV PD K+ +A+ ++ MP  + EL S+L S+SYLR F   L++ I +L   L  D  F
Sbjct:  226 PQGCFGSPVNFQSLMAKVCDGLKRIKVYLDDVIVPSLTAAEHVAQLRELLVRFTESDLKLSPKKAHIGSAEVTFLGQLITPFGVQPDPKKTDAMAQIKMPKTKSELRSMLGSVSYLRNFFPNLARNITDLTALLEKDAHF 365          
BLAST of mRNA_H-paniculata_contig20399.5282.1 vs. uniprot
Match: A0A6H5K9N3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9N3_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 3.190e-27
Identity = 58/131 (44.27%), Postives = 83/131 (63.36%), Query Frame = 0
Query:    1 MPMGTSGSPGAFQRLMAEVCKGLQCTQLYLDDIIVHSNSVKCHVADLKSFLERITTHDLKLSPKKAHLGALEITCVGHLITPHGVSPDSKRNNALIKMPMPSNRGELHSLLVSISYLRKFVLGLSKEIREL 131
            MP G+S +PG F + + EV K L     YLDD+IV  ++   HV  +++  ER+ TH+LKL+P KA +GA E   +GH I+P GV  +  + +AL KMPMP +  +L SLL  +SY RKF+  ++K IR L
Sbjct:  132 MPQGSSAAPGWFCKAVDEVIKNLHGVASYLDDLIVVDDTPATHVGTMRALFERLRTHNLKLTPPKATIGATEADFLGHTISPDGVRLNGAKVSALTKMPMPRDVKQLRSLLGGLSYYRKFLPNMAKRIRPL 262          
BLAST of mRNA_H-paniculata_contig20399.5282.1 vs. uniprot
Match: A0A6H5JFG8_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG8_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 3.290e-27
Identity = 58/135 (42.96%), Postives = 84/135 (62.22%), Query Frame = 0
Query:    1 MPMGTSGSPGAFQRLMAEVCKGLQCTQLYLDDIIVHSNSVKCHVADLKSFLERITTHDLKLSPKKAHLGALEITCVGHLITPHGVSPDSKRNNALIKMPMPSNRGELHSLLVSISYLRKFVLGLSKEIRELNHHL 135
            MP G+S +PG F +++ EV K       YLDD+IV  ++   HV  +++  ER+ TH+LKL+P KA +GA E   +GH  +P GV P+  + +AL KMPMP +  +L SLL  +SY RKF+  ++K IR L   L
Sbjct:  100 MPQGSSAAPGWFCKVVNEVIKNFHGVASYLDDLIVFDDTPATHVGTMRALFERLRTHNLKLTPPKATIGATEADFLGHTTSPDGVRPNGAKVSALTKMPMPRDVKQLRSLLGGLSYYRKFLPNMAKRIRPLTTQL 234          
BLAST of mRNA_H-paniculata_contig20399.5282.1 vs. uniprot
Match: A0A6H5JFL9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFL9_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 3.580e-27
Identity = 59/131 (45.04%), Postives = 85/131 (64.89%), Query Frame = 0
Query:    1 MPMGTSGSPGAFQRLMAEVCKGLQCTQLYLDDIIVHSNSVKCHVADLKSFLERITTHDLKLSPKKAHLGALEITCVGHLITPHGVSPDSKRNNALIKMPMPSNRGELHSLLVSISYLRKFVLGLSKEIREL 131
            MP G+S +PG F +++ EV K L     YLDD+IV  ++   HV  +++  ER+ TH+LKL+P KA +GA E   +GH I+P GV P+  + +AL KMPMP +  +L SLL  +SY RKF+  ++K IR L
Sbjct:  289 MPQGSSAAPGWFCKVVNEVIKNLHGVASYLDDLIVFDDTPATHVGTMRALFERLRTHNLKLTPPKATIGATEADFLGHTISPDGVRPNGAKVSALTKMPMPRDVKQLRSLLGGLSYYRKFLPFMAKRIRYL 419          
BLAST of mRNA_H-paniculata_contig20399.5282.1 vs. uniprot
Match: A0A6H5JUV3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUV3_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 6.760e-27
Identity = 57/131 (43.51%), Postives = 84/131 (64.12%), Query Frame = 0
Query:    1 MPMGTSGSPGAFQRLMAEVCKGLQCTQLYLDDIIVHSNSVKCHVADLKSFLERITTHDLKLSPKKAHLGALEITCVGHLITPHGVSPDSKRNNALIKMPMPSNRGELHSLLVSISYLRKFVLGLSKEIREL 131
            MP G+S +PG F +++ EV K L     YLDD+IV  +++  HV  +++  ER+ TH+LKL+P +A +GA E   + H I+P GV P   + +AL KMPMP +  +L SLL  +SY RKF+  ++K IR L
Sbjct:  176 MPQGSSAAPGRFCKVVNEVIKNLHDVASYLDDLIVFDDTLPTHVGTMRTLFERLRTHNLKLTPPQATIGATEADFLRHTISPDGVGPTGAKVSALTKMPMPRDVKQLRSLLGGLSYYRKFLPNMAKRIRPL 306          
BLAST of mRNA_H-paniculata_contig20399.5282.1 vs. uniprot
Match: A0A6H5JUZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUZ4_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 3.290e-26
Identity = 60/141 (42.55%), Postives = 85/141 (60.28%), Query Frame = 0
Query:    1 MPMGTSGSPGAFQRLMAEVCKGLQCTQLYLDDIIVHSNSVKCHVADLKSFLERITTHDLKLSPKKAHLGALEITCVGHLITPHGVSPDSKRNNALIKMPMPSNRGELHSLLVSISYLRKFVLGLSKEIRELNHHLCHDVPF 141
            MP G+S +PG F +++ EV K L     YLDD+IV  ++   HV  +++  ER+ TH+LKL+P KA +GA E   +GH I+P GV P+  +  AL KMPMP +  +L SLL  +SY RKF+  ++  IR L   L     F
Sbjct:  394 MPQGSSAAPGWFCKVVNEVIKNLHGVASYLDDLIVFDDNPASHVDTMRALFERLRTHNLKLTPPKATVGATEADFLGHTISPDGVRPNGAKVAALTKMPMPRDVKQLRSLLGGLSYYRKFLPNMATRIRPLTTLLKKQATF 534          
BLAST of mRNA_H-paniculata_contig20399.5282.1 vs. uniprot
Match: A0A6H5J9N0_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9N0_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 5.730e-26
Identity = 56/131 (42.75%), Postives = 84/131 (64.12%), Query Frame = 0
Query:    1 MPMGTSGSPGAFQRLMAEVCKGLQCTQLYLDDIIVHSNSVKCHVADLKSFLERITTHDLKLSPKKAHLGALEITCVGHLITPHGVSPDSKRNNALIKMPMPSNRGELHSLLVSISYLRKFVLGLSKEIREL 131
            MP G+S +PG F +++ EV K L     YLDD+IV  ++   HV  +++  ER+ TH+LKL+P KA +GA +   +GH I+P GV P+  + +A  K+PMP +  +L SLL  +SY RKF+  ++K IR L
Sbjct:  462 MPQGSSAAPGWFCKVVNEVIKNLHGVASYLDDLIVFDDTPATHVGTMRALFERLRTHNLKLTPPKATIGATKADFLGHTISPDGVRPNGTKVSAPTKIPMPRDVNQLRSLLGGLSYYRKFLPNMAKRIRPL 592          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20399.5282.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L269_9PHAE8.610e-3852.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3K5_9PHAE1.950e-3651.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJH5_9PHAE1.070e-3453.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZ45_9PHAE2.990e-3450.00Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K9N3_9PHAE3.190e-2744.27Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JFG8_9PHAE3.290e-2742.96Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JFL9_9PHAE3.580e-2745.04Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JUV3_9PHAE6.760e-2743.51Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JUZ4_9PHAE3.290e-2642.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J9N0_9PHAE5.730e-2642.75Reverse transcriptase domain-containing protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 1..77
e-value: 2.5E-9
score: 37.0
NoneNo IPR availableGENE3D3.30.70.270coord: 4..86
e-value: 1.5E-19
score: 72.1
NoneNo IPR availablePANTHERPTHR24559:SF300coord: 11..141
NoneNo IPR availablePANTHERPTHR24559FAMILY NOT NAMEDcoord: 11..141
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 1..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20399contigH-paniculata_contig20399:2369..2839 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20399.5282.1mRNA_H-paniculata_contig20399.5282.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig20399 1946..4283 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig20399.5282.1 ID=prot_H-paniculata_contig20399.5282.1|Name=mRNA_H-paniculata_contig20399.5282.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=157bp
MPMGTSGSPGAFQRLMAEVCKGLQCTQLYLDDIIVHSNSVKCHVADLKSF
LERITTHDLKLSPKKAHLGALEITCVGHLITPHGVSPDSKRNNALIKMPM
PSNRGELHSLLVSISYLRKFVLGLSKEIRELNHHLCHDVPFYVFGSACTS
RQDNSE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom