mRNA_H-paniculata_contig20399.5282.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig20399.5282.1
Unique NamemRNA_H-paniculata_contig20399.5282.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig20399.5282.1 vs. uniprot
Match: A0A6H5L269_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L269_9PHAE)

HSP 1 Score: 454 bits (1167), Expect = 1.320e-144
Identity = 242/515 (46.99%), Postives = 325/515 (63.11%), Query Frame = 1
Query:    1 DLGYCSTLPFHIELQPGTRPVKQRAYRHNPVITAKVQIEIDKLLEASIIRPSNSK*ASPLVVVVKPDVSIRLTCNYRRLNDATVAPFLPLSSIDEMLDALGGSNTFSVLN*ARGFWQCAMDMDSIALTAVCT*SGLYKSLGMPMGTSGSPGAFQRLMAEVCKGLQCTQLYLDDIIVHSNSVKCHVADLKSFLERITTHDLKLSPKKAHLGALEITCVGHLITPHGVSPDSKRNNALIKMPMPSNRGELHSLLVSISYLRKFVLGLSKEIRELNHHLCHDVPFYVFG------SACTSRQDNSE*SC*PDRTCISRLQRCSGRNTPLPTHDRS*PKHGLGAVPEQLQPDNTLHPLLYVSRTTDNNEKNWGATDLECAALVWAIKKRRGFLYGVTFDAFTDHQPLLNYISLSERKPRVQRVCDILSQFQFNLRYKPGKRNHLAGALSRLPVPATEDDENACRILDLHDVTIFFVGRSGITPTSLRS---VWVVHAMQKPLVRETRSLTTDEQLQLQW 1518
            DLG+C+ LPF I+L+PGTRPVKQR YR +PVI  K++IEID+L+   I+R S S  ASPLV V+K D S+RLTCN++RLN+AT+ P  P+  + +++ ALGGS  FSVL+   G++Q A+D  SI LTAVCT  GL++    P G SGSP  FQ LMA+VC GL+  Q+YLDD+IV S +   HV  L+  L R    DLKLSPKKAH+G+ E+T +GHLITP G+ PD K+ +A+ KM MP  + EL S+L S+SYLRKF+  L++ I +L   L  DV F           A  ++  + E    PD           G      T D S    G GAV EQ Q D T+ PL+Y+SR+T  NE NW  + LEC ALVWAI+K R +LYG+ F+AFTDHQPLL++IS+ E+KPRVQR+CD LS + F L Y+ GK N +A ALSRLP P T  D + C++++  D+ ++F+G        L S    ++    +   +R     TT+E    +W
Sbjct:   57 DLGHCTALPFRIDLKPGTRPVKQRPYRRSPVINRKIKIEIDRLVSVGILRKSTSNWASPLVAVLKKDGSLRLTCNFKRLNEATIVPVFPMPLVSDLISALGGSKVFSVLDLMSGYFQAAIDESSIPLTAVCTSFGLFEWTRTPQGCSGSPANFQSLMAKVCDGLRKIQVYLDDVIVPSLTAAEHVVQLRELLVRFKEFDLKLSPKKAHIGSAEVTFLGHLITPFGLHPDPKKTDAMAKMKMPKTKSELRSMLGSVSYLRKFLPNLARNITDLTALLKKDVHFKFTAHHEQLTKAVLAQLASYEVLAFPDYDAA-----IDGTRKFRLTTDAS--ISGFGAVLEQPQEDGTVRPLVYISRSTLPNEANWDVSSLECGALVWAIRKLRVYLYGIPFEAFTDHQPLLSFISMGEKKPRVQRMCDFLSAYSFTLSYRKGKENQVADALSRLPQPPTAADFDKCKLIEDGDLEVYFLGSRRRATRKLGSDSNAFISDPTENRFLRPVTLCTTEEVKAREW 564          
BLAST of mRNA_H-paniculata_contig20399.5282.1 vs. uniprot
Match: A0A6H5L5E4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5E4_9PHAE)

HSP 1 Score: 392 bits (1006), Expect = 2.700e-121
Identity = 254/684 (37.13%), Postives = 351/684 (51.32%), Query Frame = 1
Query:    1 DLGYCSTLPFHIELQPGTRPVKQRAYRHNPVITAKVQIEIDKLLEASIIRPSNSK*ASPLVVVVKPDVSIRLTCNYRRLNDATVAPFLPLSSIDEMLDALGGSNTFSVLN*ARGFWQCAMDMDSIALTAVCT*SGLYKSLGMPMGTSGSPGAFQRLMAEVCKGLQCTQLYLDDIIVHSNSVKCHVADLKSFLERITTHDLKLSPKKAHLGALEITCVGHLITPHGVSPDSKRNNALIKMPMPSNRGELHSLLVSISYLRKFVLGLSKEIRELNHHLCHDVPF-YVFGSACTSRQDNSE*SC*PDRTCISRLQRCSGRNTP--LPTHDRS*PKH--------GLGAVPEQLQPDNTLHPLLYVSRTTDNNEKNWGATDLECAALVWAIKKRRGFLYGVTFDAFTDHQPLLNYISLSERKPRVQRVCDILSQFQFNLRYKPGKRNHLAGALSRLPVPATEDDENACRILD-LHDVTIFFV---GR---SGITP----------------TSLR----SVWV-------VHAMQKP---------------LVRETRSLTTDEQLQLQWLWNRDSISPTTPASKYLTQRPST---RVYVPFLLRPWVMDCVHKEG-FHLGVHVTLASLERYYWWIGMSASVKWWVRNYFVCQAAKTSSRVARWPLISLPVPSRPGEMVSFDLLGRLP 1860
            D G C  +PF + +  GT PV  R YR NP++  KV   +D+ L A +I+ S S  ASPLVV+ K D S+R+T NY+RLN        PL  +D +LD+L     FS+ +    F Q   D D++ LTA CT + L++ L M  G + SP  F +++  V  GL+    YLDD+I        HV +L  F +R+  ++LKLSP KA +GA     +GH I+P GVSPD  +  AL  MP P+N  +L SLL  +SY RKF+  L+ ++R LN  L   VPF Y  G     +            T +S L R      P      D S P          G GA  EQ Q D ++ P++Y+SR T   E+NW   DLE   +VWAIK+ RG+L+   F  ++DH+ L +   + E   RVQR  + LS F + L+Y+ G  N  A  LSRLP+PA + D+     +D +    +F +   GR   S  TP                 ++R    SV+V       V A+                  L  +T   TTD+ + L  L ++ + SP   +    T+ P T   RVYVP L+RPWV+   H    FHLGVH T   LER+YWWIG+  SV+WW+R   VCQA KTS + ARWP+I++P+P  PG +V  D  G LP
Sbjct:   38 DFGSCIIMPFTLSVPAGTNPVASRPYRINPLMQNKVDAVLDQYLAAGLIQHSTSPWASPLVVIPKKDGSVRITVNYKRLNALVDLDGQPLPRVDGILDSLYTGKVFSIFDLNSAFHQIVCDEDTVPLTAFCTPTQLFEWLRMLQGANASPSWFVKVINRVVHGLERVLAYLDDVICFDEEPLGHVLNLIEFFKRLRQYNLKLSPGKARVGATHANFLGHTISPAGVSPDGVKVRALTHMPPPTNVKQLRSLLGGLSYYRKFLKNLATKVRPLNSLLKQGVPFKYTPGMVKVVK------------TLLSELARPPILVFPDWAAIEDNSRPLRLCSDACIDGFGASLEQEQLDGSVRPIVYISRATLPAERNWTVLDLEAGGIVWAIKRLRGYLWSTKFIIYSDHKALESIGKVGEHNARVQRWLEFLSNFTYTLKYRKGSANGNADFLSRLPLPAQDTDKTGPDCIDGVDQAGVFLIWACGRNYHSSSTPEVPLDKQDHPDRRASAAAIRNAGISVFVDCSCATGVFAVSGDPCIPDFAFSTDDVLVLAAKTSMHTTDDNITL--LVHKSATSPVGRSGGRTTRLPDTGVPRVYVPMLMRPWVLHACHTAASFHLGVHRTQRLLERFYWWIGLDRSVRWWLRACLVCQARKTSRQTARWPVIAMPLPQGPGTVVGVDFFGPLP 707          
BLAST of mRNA_H-paniculata_contig20399.5282.1 vs. uniprot
Match: A0A6H5JUZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUZ4_9PHAE)

HSP 1 Score: 390 bits (1003), Expect = 1.170e-117
Identity = 248/693 (35.79%), Postives = 354/693 (51.08%), Query Frame = 1
Query:    1 DLGYCSTLPFHIELQPGTRPVKQRAYRHNPVITAKVQIEIDKLLEASIIRPSNSK*ASPLVVVVKPDVSIRLTCNYRRLNDATVAPFLPLSSIDEMLDALGGSNTFSVLN*ARGFWQCAMDMDSIALTAVCT*SGLYKSLGMPMGTSGSPGAFQRLMAEVCKGLQCTQLYLDDIIVHSNSVKCHVADLKSFLERITTHDLKLSPKKAHLGALEITCVGHLITPHGVSPDSKRNNALIKMPMPSNRGELHSLLVSISYLRKFVLGLSKEIRELNHHLCHDVPFYVFGSACT-------SRQDNSE*SC*PDRTCISRLQRCSGRNTPLPTH-DRS*PKHGLGAVPEQLQPDNTLHPLLYVSRTTDNNEKNWGATDLECAALVWAIKKRRGFLYGVTFDAFTDHQPLLNYISLSERKPRVQRVCDILSQFQFNLRYKPGKRNHLAGALSRLPVPATEDDENACRIL--DLHDVTIFFVGRSGITPTSLRSVWVV----------------------------HAMQ----------------------KPLVRETRSLTTDEQLQ-----LQWLWNRDSISP----TTP---ASKYLTQRPSTRVYVPFLLRPWVMDCVHKEGF-HLGVHVTLASLERYYWWIGMSASVKWWVRNYFVCQAAKTSSRVARWPLISLPVPSRPGEMVSFDLLGRLP 1860
            D G CS  PF + + PG+ PV  R YR NP +  +V   +D+ L A +I+ S S  +SPLVV+ K    +R+T NYR+LN       LP+  +D+ LD L     +S+ +    F Q  +  D+I LTA  T SGL++ L MP G+S +PG F +++ EV K L     YLDD+IV  ++   HV  +++  ER+ TH+LKL+P KA +GA E   +GH I+P GV P+  +  AL KMPMP +  +L SLL  +SY RKF+  ++  IR L   L     F VF  A         S   N      PD   +S   R      P   + D S  + G G   EQ QPD ++ P++++SR T ++E++W   DLE  ++VW+IK+ RG+L+G  F  FTDH+ L ++  + E   RVQR  + L+ + + L Y+ G  N  A  LSRLP+ A E D +    L  D  +  + F+   G+TP+  R+V V                             HA++                      +P + E R L+   +L      L  L  + +  P    T P   A++ L   P  R+YVP L+RPW+M   H +   HLG   TL+ LER+YWW+GMS   KWWVR+   CQA K S +  RWP + LP+PS PG  VS D  G LP
Sbjct:  253 DFGSCSLFPFKLTVPPGSAPVTSRPYRVNPPVAKQVDAILDQYLAAGLIQHSTSPYSSPLVVIPKKSGGVRITVNYRKLNKLCALSQLPIPRVDDTLDKLLKGRIYSLFDMKSSFHQITVHRDTIPLTAFVTSSGLFEWLKMPQGSSAAPGWFCKVVNEVIKNLHGVASYLDDLIVFDDNPASHVDTMRALFERLRTHNLKLTPPKATVGATEADFLGHTISPDGVRPNGAKVAALTKMPMPRDVKQLRSLLGGLSYYRKFLPNMATRIRPLTTLLKKQATF-VFTLAMEQAVRILLSELANPPVLVYPDWDAVSDGSR------PFRLYCDAS--RDGFGGTLEQEQPDGSIRPIVFISRATLDSERHWTPLDLEAGSIVWSIKRLRGYLWGTKFRIFTDHKSLEHFAKVGENNARVQRWLEFLTAYNYTLEYRKGSANGNADFLSRLPIDAAECDRSGRSRLTPDGDEEGVSFIRSCGLTPSVHRAVGVGLGGLVPTSPTSVLGGLAPSTDDFIDFRRHAIRFILLGRPSALPSYFLDHLPSARRPPLSEIRDLSNKGRLHVDDDGLVLLVRKQTTPPLSAATRPGGRAARLLNDEP-IRIYVPMLMRPWIMQACHADASCHLGAARTLSMLERFYWWVGMSVCTKWWVRHCLRCQARKASHQTPRWPTLCLPLPSGPGVSVSVDYFGPLP 935          
BLAST of mRNA_H-paniculata_contig20399.5282.1 vs. uniprot
Match: A0A6H5JVY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVY6_9PHAE)

HSP 1 Score: 394 bits (1012), Expect = 1.660e-117
Identity = 250/684 (36.55%), Postives = 350/684 (51.17%), Query Frame = 1
Query:    1 DLGYCSTLPFHIELQPGTRPVKQRAYRHNPVITAKVQIEIDKLLEASIIRPSNSK*ASPLVVVVKPDVSIRLTCNYRRLNDATVAPFLPLSSIDEMLDALGGSNTFSVLN*ARGFWQCAMDMDSIALTAVCT*SGLYKSLGMPMGTSGSPGAFQRLMAEVCKGLQCTQLYLDDIIVHSNSVKCHVADLKSFLERITTHDLKLSPKKAHLGALEITCVGHLITPHGVSPDSKRNNALIKMPMPSNRGELHSLLVSISYLRKFVLGLSKEIRELNHHLCHDVPF-YVFGSACTSRQDNSE*SC*PDRTCISRLQRCSGRNTP--LPTHDRS*PKH--------GLGAVPEQLQPDNTLHPLLYVSRTTDNNEKNWGATDLECAALVWAIKKRRGFLYGVTFDAFTDHQPLLNYISLSERKPRVQRVCDILSQFQFNLRYKPGKRNHLAGALSRLPVPATEDDENACRILD-LHDVTIFFV---GR---SGITP----------------TSLRSVWV-----------VHAMQKP---------------LVRETRSLTTDEQLQLQWLWNRDSISPTTPASKYLTQRPST---RVYVPFLLRPWVMDCVHKEG-FHLGVHVTLASLERYYWWIGMSASVKWWVRNYFVCQAAKTSSRVARWPLISLPVPSRPGEMVSFDLLGRLP 1860
            D G C+ +PF + +  GT+PV    YR NP+I  KV +  D+ L A +I+   S  ASPLVV+ K D S+R+T NY+RLN        PL  +D +LD+L     FS+ +    F Q   D D++ LTA CT + L++ L MP G + SP  F +++  V  GL+    YLDD+I        HV +L  F +R+  ++LKLSP K  +GA     +GH I+P GVSPD  +  AL  MP P+N  +L SLL  +SY RKF+  L+ ++R LN  L   VPF Y  G     +            T +S L R      P      D S P          G GA  EQ Q D ++ P++Y+SR T   E+NW   DLE   +VWAIK+ RG+L+   F  ++DH+ L +   + E   RVQR  + LS F + L+Y+ G  N  A  LSRLP+PA + D+     +D +    +F +   GR   S  TP                 ++R+  +           V A+                  L  +TR  TTD+ + L  + ++ + SP   +    T+ P T   RVYVP L+RPWV+   H    FHLGVH T   LER+YWWIG+  SV+WW+R   VCQA KTS + ARWP+I++P+P  PG +V  D  G LP
Sbjct:  591 DFGSCTIMPFTLSVPAGTKPVASSPYRINPLIQKKVDVVSDQYLAAGLIQHCTSPWASPLVVIPKKDGSVRITVNYKRLNALVDLDGQPLPRVDGILDSLYTGKVFSIFDLNSAFHQIVCDEDTVPLTAFCTPTQLFEWLRMPQGANASPSWFVKVINRVVHGLERVLAYLDDVICFDEEPLGHVLNLIEFFKRLRQYNLKLSPGKGRVGATHANFLGHTISPAGVSPDGVKVRALTHMPPPTNVKQLRSLLGGLSYYRKFLKNLATKVRPLNSLLKQGVPFKYTPGMVKVVK------------TLLSELARPPILVFPDWAAIEDNSRPLRLCSDACIDGFGASLEQEQLDGSVRPIVYISRATLPAERNWTVLDLEAGGIVWAIKRLRGYLWSTKFIIYSDHKALESIGKVGEHNARVQRWLEFLSNFTYTLKYRKGSANGNADFLSRLPLPAQDTDKTGPDCIDGVDQAGVFLIWACGRNYHSSSTPEVPLDKQDHPDRRASAAAIRNAGIGVFVDCSCATGVFAVSGAPCIPDFAFSTDDVLVLAAKTRLHTTDDNITL--VVHKSATSPVGRSGGRTTRLPDTGVPRVYVPMLMRPWVLHACHTAASFHLGVHRTQRLLERFYWWIGLDRSVRWWLRACLVCQARKTSRQTARWPVIAMPLPQGPGTVVGVDFFGPLP 1260          
BLAST of mRNA_H-paniculata_contig20399.5282.1 vs. uniprot
Match: A0A6H5K8H1_9PHAE (RT_RNaseH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8H1_9PHAE)

HSP 1 Score: 367 bits (941), Expect = 2.620e-117
Identity = 204/440 (46.36%), Postives = 264/440 (60.00%), Query Frame = 1
Query:    1 DLGYCSTLPFHIELQPGTRPVKQRAYRHNPVITAKVQIEIDKLLEASIIRPSNSK*ASPLVVVVKPDVSIRLTCNYRRLNDATVAPFLPLSSIDEMLDALGGSNTFSVLN*ARGFWQCAMDMDSIALTAVCT*SGLYKSLGMPMGTSGSPGAFQRLMAEVCKGLQCTQLYLDDIIVHSNSVKCHVADLKSFLERITTHDLKLSPKKAHLGALEITCVGHLITPHGVSPDSKRNNALIKMPMPSNRGELHSLLVSISYLRKFVLGLSKEIRELNHHLCHDVPFYVFG------SACTSRQDNSE*SC*PDRTCISRLQRCSGRNTPLPTHDRS*PKHGLGAVPEQLQPDNTLHPLLYVSRTTDNNEKNWGATDLECAALVWAIKKRRGFLYGVTFDAFTDHQPLLNYISLSERKPRVQRVCDILSQFQFNLRYKPGKRNHL 1302
            DLG+C+TLPF I+L+PGTRPVKQR YR +PVI  K++IEID+L+   I+R   S  ASPLV V+K D S+RLTCN+ R N+AT+ P  P+  + +++ ALGGS  FSVL+   G++Q A+D  SI LTAVCT  GL +    P G SGSP  FQ LMA+                            L+  L R T  DLKLSPKKAH+G+ E+T +GHLITP  V PD K+ +A+ KM MP  + EL S+L S+SYLRKF+  L++ I +L   L  D  F           A  ++  + E    PD           G      T D S    G GAV EQ Q D T+ PL+YVSR+T  NE NW  + LEC ALVWAI+K R  LYG+ F+AFTDH+PLL++ S+ E+KPRVQR+ D LS + F L Y+ GK N +
Sbjct:   57 DLGHCTTLPFRIDLKPGTRPVKQRPYRRSPVINRKIKIEIDRLVSCGILRKFTSNWASPLVAVLKEDGSLRLTCNFTRSNEATIVPVFPMPLVSDLISALGGSKVFSVLDLMSGYFQAAIDESSIPLTAVCTSFGLSEWTRTPQGYSGSPANFQSLMAK----------------------------LRELLVRFTEFDLKLSPKKAHIGSAEVTFLGHLITPFSVRPDPKKTDAMAKMKMPKTKSELRSMLGSVSYLRKFLPNLARNITDLTALLEKDAHFKFTAHHEQLTKAVLAQLASYEVLAFPDYAAA-----IDGTRKFRLTTDAS--ISGFGAVLEQPQEDGTVSPLVYVSRSTLPNEANWDVSSLECGALVWAIRKLRDCLYGIPFEAFTDHKPLLSFFSMGEKKPRVQRMGDFLSAYSFTLSYRKGKDNRM 461          
BLAST of mRNA_H-paniculata_contig20399.5282.1 vs. uniprot
Match: A0A6H5K3K5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3K5_9PHAE)

HSP 1 Score: 377 bits (968), Expect = 2.500e-113
Identity = 262/744 (35.22%), Postives = 342/744 (45.97%), Query Frame = 1
Query:   52 TRPVKQRAYRHNPVITAKVQIEIDKLLEASIIRPSNSK*ASPLVVVVKPDVSIRLTCNYRRLNDATVAPFLPLSSIDEMLDALGGSNTFSVLN*ARGFWQCAMDMDSIALTAVCT*SGLYKSLGMPMGTSGSPGAFQRLMAEVCKGLQCTQLYLDDIIVHSNSVKCHVADLKSFLERITTHDLKLSPKKAHLGALEITCVGHLITPHGVSPDSKRNNALIKMPMPSNRGELHSLLVSISYLRKFVLGLSKEIRELNHHLCHDVPFYVFG------SACTSRQDNSE*SC*PDRTCISRLQRCSGRNTPLPTHDRS*PKHGLGAVPEQLQPDNTLHPLLYVSRTTDNNEKNWGATDLECAALVWAIKKRRGFLYGVTFDAFTDHQPLLNYISLSERKPRVQRVCDILSQFQFNLRYKPGKRNHLAGALSRLPVPA---------TEDDENACRILDLHDVTIFFVGRSGITPTSLRSVWVVHAMQKPLVRETRSLTTDEQLQLQW------------------------------------------------LWNRDSISPTTPASKYLTQRPST------------------------------------------------------------------------------RVYVPFLLRPWVMDCVHKEGFHLGVHVTLASLERYYWWIGMSASVKWWVRNYFVCQAAKTSSRVARWPLISLPVPSRPGEMVSFDLLGRLP 1860
            TRPVKQR YR +PVI  K++IEID+L+   I+  S S  AS LV V+K D  + LTCN+RRLN+AT+ P   +  + +++ ALGGS  FSVL+   G++Q A+D  SI LTAVCT  GL++    P G SGSP  FQ LMA+VC G +  Q+ LDD+IV S +V  HV  L+ FL R T  DL+LSPKKAH+G+ E+T +GHLITP G+ PD K+ +A+ KM MP  + EL S+  S+SYLRKF+  L++ I +L   L  D  F           A  ++  + E    PD           G      T D S    G GA  EQ Q D T+ PL+Y+SR+   NE NW  + LEC ALVW I    G L  V     +      +  + + R+PR  R   +          +PG+     G  +  P PA         T     A R    H     +  RS   P   R+       ++P      ++ T                                                        L  RD  +PT P   Y  + P                                                                                RVYVPFLLRPW +  VHKE  HLG + TLASLERYY+WIGMS SV+W+V +   CQA+KTS R  RWPL+SLP+PSRPGEMV+FD+LG LP
Sbjct:  333 TRPVKQRPYRRSPVINRKIKIEIDRLVSCGILGKSTSNWASSLVAVLKKDGRLGLTCNFRRLNEATIVPVFTMPLVSDLISALGGSKVFSVLDLMSGYFQAAIDESSIPLTAVCTSFGLFEWARTPQGCSGSPANFQSLMAKVCDGFKRIQVCLDDVIVPSLTVAEHVVQLREFLVRFTEFDLQLSPKKAHIGSAEVTFLGHLITPVGLQPDPKKTDAMAKMKMPKTKSELRSIFGSVSYLRKFLPNLARNITDLTALLKKDAHFKFTAHHEQLTKAVLAQLASYEVLAFPDHAAA-----IDGTRKFRLTTDAS--ISGFGATLEQPQEDGTVRPLVYISRSILPNEANWDVSSLECGALVWTINCV-GLLVDVRVVTRSSRPSTRSTTAAAARRPRRARDVGVEES------PRPGRAATAHGDAA--PAPAGVRPSRPQGTPARTPAARGRGAHPSAAGYKQRSRRPPAQRRTATAAAREERPHADHPAAVPTTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPASGGRPRRPLERRDD-TPTIPQPPYQLRPPLPAADAGHHHRGAPGVEHVGGVPPRREQSRCQNLKRQQLAASEKFNRKTDLEWAAAQADDLRAAAVINGKFERLLGDEPHRVYVPFLLRPWALGVVHKESGHLGENATLASLERYYFWIGMSESVRWFVSHCIQCQASKTSRRAHRWPLVSLPLPSRPGEMVAFDILGPLP 1059          
BLAST of mRNA_H-paniculata_contig20399.5282.1 vs. uniprot
Match: A0A6H5JVW3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVW3_9PHAE)

HSP 1 Score: 378 bits (970), Expect = 6.520e-112
Identity = 232/654 (35.47%), Postives = 332/654 (50.76%), Query Frame = 1
Query:    1 DLGYCSTLPFHIELQPGTRPVKQRAYRHNPVITAKVQIEIDKLLEASIIRPSNSK*ASPLVVVVKPDVSIRLTCNYRRLNDATVAPFLPLSSIDEMLDALGGSNTFSVLN*ARGFWQCAMDMDSIALTAVCT*SGLYKSLGMPMGTSGSPGAFQRLMAEVCKGLQCTQLYLDDIIVHSNSVKCHVADLKSFLERITTHDLKLSPKKAHLGALEITCVGHLITPHGVSPDSKRNNALIKMPMPSNRGELHSLLVSISYLRKFVLGLSKEIRELNHHLCHDVPFYVFGSACTSRQDNSE*SC*PDRTCISRLQRCSGRNTPLPTHDRS*PKHGLGAVPEQLQPDNTLHPLLYVSRTTDNNEKNWGATDLECAALVWAIKKRRGFLYGVTFDAFTDHQPLLNYISLSERKPRVQRVCDILSQFQFNLRYKPGKRNHLAGALSRLPVPATEDDENACRILDLHD--------------VTIFFVGRSGI-----TPTSLRSVWVVHAMQKP-----------LVRETRSLTTDEQLQLQWLWNRDSISPTTPASKYLTQRPST---RVYVPFLLRPWVMDCVHKEG-FHLGVHVTLASLERYYWWIGMSASVKWWVRNYFVCQAAKTSSRVARWPLISLPVPSRPGEMVSFDLLGRLP 1860
            D G C+ +PF + +  GT+ V    YR NP++  KV   +D+ L A +I+ S S  ASP+VV+ K + S+R+T NY+RLN        PL  +D +LD+L     FS+ +    F Q   D D++ LTA CT + L++ L MP G + SP  F +++  V  GL+    YLDD+I        HV +L  F +R+  ++LKLSP KA +GA     +GH I+P GVSPD  +  AL  MP P+N  +L SLL  +SY RKF+  L+ ++R LN  L   VP       C+               CI                       G GA  EQ Q D ++ P++Y+SR     E+NW   DLE   +VWAIK+ RG+L+   F  ++DH+ L +   + E   R+QR  + LS F + L+Y+ G  N  A  LSRL +PA + D+     +D  D               +   +  +GI        +  +  V  A   P           L  +TR  TT++ + L  L ++ + S    +    T+ P T   RVYVP L+RPWV+   H    FHLGVH T   LER+YWWIG+  SV+WW+R   VCQA KTS +  RWP+I++P+P  PG +V  D  G LP
Sbjct:  689 DFGSCTIMPFTLSVPAGTKSVASHPYRINPLMQKKVDAVLDQYLAAGLIQHSTSPWASPVVVIPKKEGSVRITVNYKRLNALVDLDGQPLPRVDGILDSLYTGKVFSIFDLNSAFHQIVCDKDTVPLTAFCTPTQLFEWLRMPQGANASPSWFVKVINRVVHGLERVLAYLDDVICFDEEPLGHVLNLIEFFKRLRQYNLKLSPGKARVGATHANFLGHTISPAGVSPDGVKVRALTHMPPPTNVKQLRSLLGGLSYYRKFLKNLATKVRPLNSLLKQGVPINRLLRLCSD-------------ACID----------------------GFGASLEQEQLDGSVRPIVYISRAALPAERNWTVLDLEAGGIVWAIKRLRGYLWSTKFIIYSDHKALESIGKVGEHNARLQRWLEFLSNFTYTLKYRKGSANGNADFLSRLTLPAQDTDKTGRDCIDGVDQAGPLDQQNHADRRASAAAIRNAGIGVFVDCSCATGAFAVSGAPCIPDFALSSDDVLVLAAKTRLHTTNDNIIL--LVHKSATSAVGRSGGRTTRLPDTGEFRVYVPMLMRPWVLHACHTAASFHLGVHRTQRLLERFYWWIGLDRSVRWWLRACLVCQARKTSRQTPRWPVIAMPLPHGPGTVVGVDFFGSLP 1305          
BLAST of mRNA_H-paniculata_contig20399.5282.1 vs. uniprot
Match: A0A6H5K6L2_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L2_9PHAE)

HSP 1 Score: 370 bits (949), Expect = 7.360e-110
Identity = 246/684 (35.96%), Postives = 341/684 (49.85%), Query Frame = 1
Query:    1 DLGYCSTLPFHIELQPGTRPVKQRAYRHNPVITAKVQIEIDKLLEASIIRPSNSK*ASPLVVVVKPDVSIRLTCNYRRLNDATVAPFLPLSSIDEMLDALGGSNTFSVLN*ARGFWQCAMDMDSIALTAVCT*SGLYKSLGMPMGTSGSPGAFQRLMAEVCKGLQCTQLYLDDIIVHSNSVKCHVADLKSFLERITTHDLKLSPKKAHLGALEITCVGHLITPHGVSPDSKRNNALIKMPMPSNRGELHSLLVSISYLRKFVLGLSKEIRELNHHLCHDVPF-YVFGSACTSRQDNSE*SC*PDRTCISRLQRCSGRNTP--LPTHDRS*PKH--------GLGAVPEQLQPDNTLHPLLYVSRTTDNNEKNWGATDLECAALVWAIKKRRGFLYGVTFDAFTDHQPLLNYISLSERKPRVQRVCDILSQFQFNLRYKPGKRNHLAGALSRLPVPATEDDENACRILD-LHDVTIFFV---GR---SGITP----------------TSLR----SVWV-------VHAMQKP---------------LVRETRSLTTDEQLQLQWLWNRDSISPTTPASKYLTQRPST---RVYVPFLLRPWVMDCVHKEG-FHLGVHVTLASLERYYWWIGMSASVKWWVRNYFVCQAAKTSSRVARWPLISLPVPSRPGEMVSFDLLGRLP 1860
            D G C+ +PF + +  GT+PV  R YR NP++  KV   +D+ L A +I+ S S  ASPLVV+ K D S+R+T NY+RLN        PL  +D                            D++ LTA CT + L++ L MP G + SP  F +++  V  GL+    YLDD+I        HV +L  F +R+  ++LKLSP K  +GA     +GH I+P GVSPD  +  AL  MP P+N  +L SLL  +SY RKF+  L+ ++R LN  L   VPF Y  G     +            T +S L R      P      D S P          G GA  EQ Q   ++ P++Y+SR T   E+NW   DLE   +VWAIK+ RG+L+   F  ++DH+ L +   + E   RVQR  + LS F + L+Y+ G  N  A  LSRLP+PA + D+     +D +    +F +   GR   S  TP                 ++R    SV+V       V A+                  L  +TR  TTD+ + L  L ++ + SP   +    T+ P T   RVYVP L+RPWV+   H    FHLGVH T   LER+YWWIG+  SV+WW+R   VCQA KTS + ARWP+I++P+P  PG +V  D  G LP
Sbjct:  611 DFGSCTIMPFTLSVPAGTKPVASRPYRINPLMQKKVDAVLDQYLAAGLIQHSTSPWASPLVVIPKKDGSVRITVNYKRLNALVDLDGQPLPRVD----------------------------DTVPLTAFCTPTQLFEWLRMPQGANASPSWFVKVINRVVHGLERVLAYLDDVICFDEEPLGHVLNLIEFFKRLRQYNLKLSPGKGRVGATHANFLGHTISPAGVSPDGVKVRALTHMPRPTNVKQLRSLLGGLSYYRKFLKNLATKVRPLNSLLKQGVPFKYTPGMVKVVK------------TLLSELARPPILVFPDWAAIEDNSRPLRLCSDACIDGFGASLEQEQLHGSVRPIVYISRATLPAERNWTVLDLEAGGIVWAIKRLRGYLWSTKFIIYSDHKALESIGKVGEHNARVQRWLEFLSNFTYTLKYRKGSANGNADFLSRLPLPAQDTDKTGPDCIDGVDQAGVFLIWACGRNYHSSSTPEVPLDKQDHPDRRASAAAIRNAGISVFVDCSCATGVFAVSGAPCIPDFAFSTDDVLVLAAKTRLHTTDDNITL--LVHKSATSPVGRSGGRTTRLPDTGVPRVYVPMLMRPWVLHACHTAASFHLGVHRTQRLLERFYWWIGLDRSVRWWLRACLVCQARKTSRQTARWPVIAMPLPQGPGTVVGVDFFGPLP 1252          
BLAST of mRNA_H-paniculata_contig20399.5282.1 vs. uniprot
Match: A0A6H5KRJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRJ8_9PHAE)

HSP 1 Score: 370 bits (950), Expect = 1.560e-109
Identity = 249/667 (37.33%), Postives = 341/667 (51.12%), Query Frame = 1
Query:   49 GTRPVKQRAYRHNPVITAKVQIEIDKLLEASIIRPSNSK*ASPLVVVVKPDVSIRLTCNYRRLNDATVAPFLPLSSIDEMLDALGGSNTFSVLN*ARGFWQCAMDMDSIALTAVCT*SGLYKSLGMPMGTSGSPGAFQRLMAEVCKGLQCTQLYLDDIIVHSNSVKCHVADLKSFLERITTHDLKLSPKKAHLGALEITCVGHLITPHGVSPDSKRNNALIKMPMPSNRGELHSLLVSISYLRKFVLGLSKEIRELNHHLCHDVPF-YVFGSACTSRQDNSE*S-----C*PDRTCI---SRLQR-CSGRNTPLPTHDRS*PKHGLGAVPEQLQPDNTLHPLLYVSRTTDNNEKNWGATDLECAALVWAIKKRRGFLYGVTFDAFTDHQPLLNYISLSERKPRVQRVCDILSQFQFNLRYKPGKRNHLAGALSRLPVPATEDDENACRILD-LHDVTIFFV---GR---SGITP----------------TSLR----SVWV-------VHAMQKP---------------LVRETRSLTTDEQLQLQWLWNRDSISPTTPASKYLTQRPST---RVYVPFLLRPWVMDCVHKEG-FHLGVHVTLASLERYYWWIGMSASVKWWVRNYFVCQAAKTSSRVARWPLISLPVPSRPGEMVSFDLLGRLP 1860
            GT+ V  R YR NP++  K    +D+ L A +I+ S S  ASPLVV+ K D S+R+T NY+RLN         L  +D +LD L     FS+ +    F Q   D D++ LTA CT +  ++ L MP G + SP  F +++  V  GL+    YLDD+I        HV +L  F +R+  ++LKLS  KA +GA     +GH I+P GVSPD  +  AL  MP P+N  +L SLL  +SY RKF+  L+ ++R LN  L   VPF Y  G     +   SE +       PD   I   SRL R CS                G GA  EQ Q D ++ P++Y+SR T   E+NW   DLE   +VWAIK+ RG L+   F  ++DH+ L +   + E   RVQR  + LS F + L+Y+ G  N  A  LSRLP+PA + D+     +D +    +F +   GR   S  TP                 ++R    SV+V       V A+                  L  +TR  TTD+ + L  L ++   SP   +    T+ P T   RVYVP L+RPWV+   H    FHLGVH T   LER+YWWIG+  SV+WW+R   VCQA KTS + ARWP+I++P+P  PG +V  D  G LP
Sbjct:  714 GTKSVASRPYRINPLMQNKADAVLDQYLAARLIQHSTSPWASPLVVIPKKDGSVRITVNYKRLNALVDLDGQHLPRVDGILDTLYTGKVFSIFDLNSAFPQIVCDEDTVPLTAFCTPTQFFEWLRMPQGANASPSWFIKVINRVVHGLERVLAYLDDVICFDEEPLGHVVNLIEFFKRLRQYNLKLSSGKARVGATHANFLGHTISPAGVSPDGVKVRALTHMPPPTNVKQLRSLLGGLSYYRKFLKNLATKVRPLNSLLKQGVPFKYTPGMVKVVKTLLSELARPPILVFPDWAAIEDNSRLLRLCSDACI-----------DGFGASLEQEQLDGSVRPIVYISRATLPAERNWTVLDLEAGGIVWAIKRLRGCLWSTKFIIYSDHKALESIGKVGEHNARVQRWLEFLSNFTYTLKYRKGSANGNADFLSRLPLPAQDTDKTGPDCIDGVDQAGVFLIWACGRNYHSSSTPEVPLDKQDHPDRRASAAAIRNAGISVFVDCSCATGVFAVSGAPCIPDFAFSTDDVLVLAAKTRLHTTDDNITL--LVHKSVTSPVGRSGGRTTRLPDTGVPRVYVPMLMRPWVLHACHTAASFHLGVHRTQRLLERFYWWIGLDRSVRWWLRACLVCQARKTSRQTARWPVIAMPLPQGPGTVVGVDFFGPLP 1367          
BLAST of mRNA_H-paniculata_contig20399.5282.1 vs. uniprot
Match: A0A6H5KRW3_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRW3_9PHAE)

HSP 1 Score: 340 bits (871), Expect = 5.100e-104
Identity = 190/480 (39.58%), Postives = 278/480 (57.92%), Query Frame = 1
Query:  118 IDKLLEASIIRPSNSK*ASPLVVVVKPDVSIRLTCNYRRLNDATVAPFLPLSSIDEMLDALGGSNTFSVLN*ARGFWQCAMDMDSIALTAVCT*SGLYKSLGMPMGTSGSPGAFQRLMAEVCKGLQCTQLYLDDIIVHSNSVKCHVADLKSFLERITTHDLKLSPKKAHLGALEITCVGHLITPHGVSPDSKRNNALIKMPMPSNRGELHSLLVSISYLRKFVLGLSKEIRELNHHLCHDVPFYVFGSACTSRQDNSE*SC*PDRTCISRLQRC-SGRNTPLPTHDRS*PKHGLGAVPEQLQPDNTLHPLLYVSRTTDNNEKNWGATDLECAALVWAIKKRRGFLYGVTFDAFTDHQPLLNYISLSERKPRVQRVCDILSQFQFNLRYKPGKRNHLAGALSRLPVPATEDDENA-CRILDLHDVTIFFVGRSGITPTSLRSVWVVHAMQKPLVRETRS-----------LTTDEQLQLQW 1518
            +DKLL A ++R S S  AS LVVV K +  +RLT NY+++N  +V P LP+  ++++L  L  +  FS L+   GF+QC ++ DSI +TAV T +GLY+ + MP G S SPG F  +M  VC GL+  +L++DD+IV+S +   HV DL+ F ER+T  +LKL+PKKA LG   +T + H +T  G+ P  K+   +++MPMP+N  +L S+L S+SY RKF+ G+S ++  +   L  D  F          Q+  +    P+       +   +G+       D S    GLGAV EQ Q D T+ PL Y+SR+T  NE+ W AT+LEC A+VWAIKK R   YG+ F  ++DHQPL N  SL+E+  RVQR  D LS + + L Y+PGK N  A  +SRLP+P  E+D +   R+ D  D+ ++ +G SG+ P  +  V  +   ++P   + R             TTDE+    W
Sbjct:    1 MDKLLLAGVLRRSYSNWASSLVVVAKANGGVRLTVNYKKVNQMSVIPKLPIPVVEDILADLKSAKIFSTLDLISGFFQCCIEEDSIPITAVITATGLYEFMAMPQGLSSSPGWFHSVMQRVCDGLERVRLFIDDVIVYSRNGAEHVQDLERFFERMTKFNLKLAPKKAQLGVKVVTFLEHQVTAEGIEPCPKKVKPMLQMPMPTNVSQLRSILGSLSYYRKFLKGMSAKLHSVTALLKKDAKFAFTAKHAEVIQEMKDKLSSPEVLAFPDYEGAITGKRKFRLITDAS--ISGLGAVIEQEQEDGTVRPLCYLSRSTYPNERRWSATELECGAIVWAIKKNRTLFYGIPFQIYSDHQPLRNLESLAEKNNRVQRWFDFLSAYTYELIYRPGKANGNADCMSRLPLPPMEEDASPEMRLTDPSDLDVYMIGASGVIPARMGPV--LGGRKRPTQADPRKNFVLGEDDHQPFTTDEEADRTW 476          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20399.5282.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L269_9PHAE1.320e-14446.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5E4_9PHAE2.700e-12137.13Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JUZ4_9PHAE1.170e-11735.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVY6_9PHAE1.660e-11736.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8H1_9PHAE2.620e-11746.36RT_RNaseH domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K3K5_9PHAE2.500e-11335.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVW3_9PHAE6.520e-11235.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K6L2_9PHAE7.360e-11035.96Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5KRJ8_9PHAE1.560e-10937.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRW3_9PHAE5.100e-10439.58Reverse transcriptase domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20399contigH-paniculata_contig20399:1946..4283 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score102.1
Seed ortholog evalue2.5e-19
Seed eggNOG ortholog7029.ACYPI22631-PA
Hectar predicted targeting categoryother localisation
EggNOG free text desc.K02A2.6-like
EggNOG OGs38F42@33154,3BA5H@33208,3CWAK@33213,3ECJT@33342,3SIRK@50557,41WI3@6656,COG2801@1,KOG0017@2759
COG Functional cat.O
Best tax levelParaneoptera
Best eggNOG OGNA|NA|NA
Exons2
Model size1860
Cds size471
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20399.5282.1prot_H-paniculata_contig20399.5282.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig20399 2369..2839 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929530.0328236-UTR-H-paniculata_contig20399:1945..23681622929530.0328236-UTR-H-paniculata_contig20399:1945..2368Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig20399 1946..2368 +
1691480900.4181292-UTR-H-paniculata_contig20399:1945..23681691480900.4181292-UTR-H-paniculata_contig20399:1945..2368Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig20399 1946..2368 +
1622929530.0688384-UTR-H-paniculata_contig20399:2839..35261622929530.0688384-UTR-H-paniculata_contig20399:2839..3526Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig20399 2840..3526 +
1691480900.4363666-UTR-H-paniculata_contig20399:2839..35261691480900.4363666-UTR-H-paniculata_contig20399:2839..3526Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig20399 2840..3526 +
1622929530.082966-UTR-H-paniculata_contig20399:4004..42831622929530.082966-UTR-H-paniculata_contig20399:4004..4283Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig20399 4005..4283 +
1691480900.4461157-UTR-H-paniculata_contig20399:4004..42831691480900.4461157-UTR-H-paniculata_contig20399:4004..4283Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig20399 4005..4283 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929530.0521584-CDS-H-paniculata_contig20399:2368..28391622929530.0521584-CDS-H-paniculata_contig20399:2368..2839Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20399 2369..2839 +
1691480900.4274316-CDS-H-paniculata_contig20399:2368..28391691480900.4274316-CDS-H-paniculata_contig20399:2368..2839Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20399 2369..2839 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig20399.5282.1

>prot_H-paniculata_contig20399.5282.1 ID=prot_H-paniculata_contig20399.5282.1|Name=mRNA_H-paniculata_contig20399.5282.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=157bp
MPMGTSGSPGAFQRLMAEVCKGLQCTQLYLDDIIVHSNSVKCHVADLKSF
LERITTHDLKLSPKKAHLGALEITCVGHLITPHGVSPDSKRNNALIKMPM
PSNRGELHSLLVSISYLRKFVLGLSKEIRELNHHLCHDVPFYVFGSACTS
RQDNSE*
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mRNA from alignment at H-paniculata_contig20399:1946..4283+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig20399.5282.1 ID=mRNA_H-paniculata_contig20399.5282.1|Name=mRNA_H-paniculata_contig20399.5282.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2338bp|location=Sequence derived from alignment at H-paniculata_contig20399:1946..4283+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GATCTGGGATACTGCAGCACGCTCCCCTTTCACATCGAGTTGCAACCCGG CACTCGGCCGGTCAAGCAGAGAGCGTACCGCCATAATCCGGTGATAACTG CCAAAGTTCAAATTGAGATTGATAAACTATTAGAGGCCAGTATCATACGT CCTTCTAACTCGAAATGAGCGAGCCCACTGGTCGTTGTTGTGAAACCTGA CGTCAGTATCCGTCTCACGTGTAATTATAGGCGGTTGAACGACGCTACTG TAGCTCCTTTTTTACCTTTGTCTTCTATTGATGAGATGCTCGATGCCCTC GGCGGTTCAAACACCTTTTCGGTACTCAATTGAGCAAGGGGGTTTTGGCA ATGCGCCATGGATATGGATTCAATCGCTTTAACCGCAGTATGCACTTAAT CGGGTCTGTATAAGTCGTTAGGAATGCCTATGGGTACGAGTGGTTCGCCA GGGGCGTTTCAACGCCTTATGGCAGAAGTATGCAAAGGCTTGCAATGTAC TCAGTTGTATCTGGACGACATCATCGTTCACTCCAACTCCGTTAAATGTC ACGTCGCGGACTTGAAATCCTTCTTGGAAAGAATCACGACTCATGACTTG AAGTTGTCACCGAAGAAAGCGCACCTCGGAGCTCTAGAAATAACGTGTGT AGGACATTTGATCACACCGCACGGTGTTTCTCCGGATTCCAAAAGAAACA ACGCGTTAATAAAGATGCCGATGCCCTCCAACCGCGGAGAATTGCACTCA CTTCTTGTCAGCATTTCATATCTGCGCAAGTTTGTGCTGGGTCTTTCGAA GGAAATCAGGGAACTCAACCACCATTTATGTCACGACGTGCCATTTTATG TTTTCGGATCGGCATGCACGAGTCGCCAAGACAATTCTGAATAATCTTGC TAGCCCGACCGTACTTGCATTTCCCGATTACAACGCTGCAGTGGACGGAA CACGCCCCTTCCAACTCACGATCGATCCTAACCCAAACACGGTCTAGGAG CCGTTCCCGAACAGCTGCAACCCGATAACACCCTCCACCCTTTGTTATAC GTCAGTCGCACCACTGATAATAACGAGAAGAACTGGGGTGCGACGGATTT GGAGTGCGCTGCATTGGTATGGGCGATCAAGAAACGGCGAGGGTTTCTGT ACGGTGTTACGTTTGACGCTTTCACGGATCACCAGCCGCTTCTCAACTAC ATAAGTCTGTCGGAGAGAAAACCGAGAGTCCAACGGGTGTGCGATATACT TAGCCAGTTCCAGTTTAATTTGCGGTACAAACCCGGCAAGCGGAATCACC TAGCAGGTGCCTTGTCCCGTCTGCCCGTCCCTGCCACCGAAGACGATGAA AACGCTTGCCGTATTTTAGACCTGCATGACGTTACAATTTTCTTTGTCGG ACGCAGCGGTATTACGCCTACGTCCTTGCGTTCGGTTTGGGTCGTGCACG CGATGCAGAAGCCGCTGGTCCGGGAAACACGTTCCTTAACCACCGACGAG CAACTACAACTACAATGGTTATGGAATCGAGACAGTATTTCGCCCACTAC CCCGGCTTCGAAGTATCTTACGCAACGCCCTGTTAAGAATATTCGAGTGC CGCCTTTGAATGTTGTTACCGTACTCCCCTCTGTCCCGCGTTACCAAGGA CAGCTGAATACTGGTTTAAAGCTCCACGCATTTCCGGTTGCACCCTACGA TCCTTCTGCGGATCCCGCCCCGGTGTTCGGATGGGCAGGAGCGACAGGAG CGCCTTTTGGGGGAGCGATTGTGTCAGCGGAGCGCGACCGACCGGGCGGC TGAGCAACAGAAAGATCCTTTGGCTAGCGCCATCATTAAGTATGTGTTAT CTGAGCAATCGCTCCCGGTTCCGAATTTTGTGACGACGGCGGCCACAGCA GGGCATTTCGAGGTGAAGGAGGTTTGCCGTTTAGCTCGGCAGGGTACTCT GGTAACATTAGACGATAGTCGACACCTTTTAGTGAAACGTTCCATGGTCA AGTTCGCGTCTCGACCTAACCGCGCGAGTGGAAAATTCGATCGCTTGCTC AACCATTAGTCCACCCGCGTATACGTACCGTTCCTCTTACGCCCGTGGGT CATGGATTGCGTACACAAAGAAGGTTTCCATTTAGGAGTTCACGTTACAT TAGCGTCGCTCGAACGATATTACTGGTGGATCGGAATGTCAGCAAGTGTA AAATGGTGGGTGCGTAACTATTTCGTCTGTCAAGCGGCGAAAACGTCTAG TCGCGTGGCCCGTTGGCCCCTTATTTCACTCCCGGTTCCATCCCGTCCGG GGGAGATGGTCTCGTTCGATCTCCTCGGACGTTTGCCC
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Coding sequence (CDS) from alignment at H-paniculata_contig20399:1946..4283+

>mRNA_H-paniculata_contig20399.5282.1 ID=mRNA_H-paniculata_contig20399.5282.1|Name=mRNA_H-paniculata_contig20399.5282.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=942bp|location=Sequence derived from alignment at H-paniculata_contig20399:1946..4283+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCTATGGGTACGAGTGGTTCGCCAGGGGCGTTTCAACGCCTTATGGC
AGAAGTATGCAAAGGCTTGCAATGTACTCAGTTGTATCTGGACGACATCA
TCGTTCACTCCAACTCCGTTAAATGTCACGTCGCGGACTTGAAATCCTTC
TTGGAAAGAATCACGACTCATGACTTGAAGTTGTCACCGAAGAAAGCGCA
CCTCGGAGCTCTAGAAATAACGTGTGTAGGACATTTGATCACACCGCACG
GTGTTTCTCCGGATTCCAAAAGAAACAACGCGTTAATAAAGATGCCGATG
CCCTCCAACCGCGGAGAATTGCACTCACTTCTTGTCAGCATTTCATATCT
GCGCAAGTTTGTGCTGGGTCTTTCGAAGGAAATCAGGGAACTCAACCACC
ATTTATGTCACGACGTGCCATTTTATGTTTTCGGATCGGCATGCACGAGT
CGCCAAGACAATTCTGAATAAATGCCTATGGGTACGAGTGGTTCGCCAGG
GGCGTTTCAACGCCTTATGGCAGAAGTATGCAAAGGCTTGCAATGTACTC
AGTTGTATCTGGACGACATCATCGTTCACTCCAACTCCGTTAAATGTCAC
GTCGCGGACTTGAAATCCTTCTTGGAAAGAATCACGACTCATGACTTGAA
GTTGTCACCGAAGAAAGCGCACCTCGGAGCTCTAGAAATAACGTGTGTAG
GACATTTGATCACACCGCACGGTGTTTCTCCGGATTCCAAAAGAAACAAC
GCGTTAATAAAGATGCCGATGCCCTCCAACCGCGGAGAATTGCACTCACT
TCTTGTCAGCATTTCATATCTGCGCAAGTTTGTGCTGGGTCTTTCGAAGG
AAATCAGGGAACTCAACCACCATTTATGTCACGACGTGCCATTTTATGTT
TTCGGATCGGCATGCACGAGTCGCCAAGACAATTCTGAATAA
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