mRNA_H-paniculata_contig20399.5282.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig20399.5282.1 vs. uniprot
Match: A0A6H5L269_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L269_9PHAE) HSP 1 Score: 454 bits (1167), Expect = 1.320e-144 Identity = 242/515 (46.99%), Postives = 325/515 (63.11%), Query Frame = 1
Query: 1 DLGYCSTLPFHIELQPGTRPVKQRAYRHNPVITAKVQIEIDKLLEASIIRPSNSK*ASPLVVVVKPDVSIRLTCNYRRLNDATVAPFLPLSSIDEMLDALGGSNTFSVLN*ARGFWQCAMDMDSIALTAVCT*SGLYKSLGMPMGTSGSPGAFQRLMAEVCKGLQCTQLYLDDIIVHSNSVKCHVADLKSFLERITTHDLKLSPKKAHLGALEITCVGHLITPHGVSPDSKRNNALIKMPMPSNRGELHSLLVSISYLRKFVLGLSKEIRELNHHLCHDVPFYVFG------SACTSRQDNSE*SC*PDRTCISRLQRCSGRNTPLPTHDRS*PKHGLGAVPEQLQPDNTLHPLLYVSRTTDNNEKNWGATDLECAALVWAIKKRRGFLYGVTFDAFTDHQPLLNYISLSERKPRVQRVCDILSQFQFNLRYKPGKRNHLAGALSRLPVPATEDDENACRILDLHDVTIFFVGRSGITPTSLRS---VWVVHAMQKPLVRETRSLTTDEQLQLQW 1518
DLG+C+ LPF I+L+PGTRPVKQR YR +PVI K++IEID+L+ I+R S S ASPLV V+K D S+RLTCN++RLN+AT+ P P+ + +++ ALGGS FSVL+ G++Q A+D SI LTAVCT GL++ P G SGSP FQ LMA+VC GL+ Q+YLDD+IV S + HV L+ L R DLKLSPKKAH+G+ E+T +GHLITP G+ PD K+ +A+ KM MP + EL S+L S+SYLRKF+ L++ I +L L DV F A ++ + E PD G T D S G GAV EQ Q D T+ PL+Y+SR+T NE NW + LEC ALVWAI+K R +LYG+ F+AFTDHQPLL++IS+ E+KPRVQR+CD LS + F L Y+ GK N +A ALSRLP P T D + C++++ D+ ++F+G L S ++ + +R TT+E +W
Sbjct: 57 DLGHCTALPFRIDLKPGTRPVKQRPYRRSPVINRKIKIEIDRLVSVGILRKSTSNWASPLVAVLKKDGSLRLTCNFKRLNEATIVPVFPMPLVSDLISALGGSKVFSVLDLMSGYFQAAIDESSIPLTAVCTSFGLFEWTRTPQGCSGSPANFQSLMAKVCDGLRKIQVYLDDVIVPSLTAAEHVVQLRELLVRFKEFDLKLSPKKAHIGSAEVTFLGHLITPFGLHPDPKKTDAMAKMKMPKTKSELRSMLGSVSYLRKFLPNLARNITDLTALLKKDVHFKFTAHHEQLTKAVLAQLASYEVLAFPDYDAA-----IDGTRKFRLTTDAS--ISGFGAVLEQPQEDGTVRPLVYISRSTLPNEANWDVSSLECGALVWAIRKLRVYLYGIPFEAFTDHQPLLSFISMGEKKPRVQRMCDFLSAYSFTLSYRKGKENQVADALSRLPQPPTAADFDKCKLIEDGDLEVYFLGSRRRATRKLGSDSNAFISDPTENRFLRPVTLCTTEEVKAREW 564
BLAST of mRNA_H-paniculata_contig20399.5282.1 vs. uniprot
Match: A0A6H5L5E4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5E4_9PHAE) HSP 1 Score: 392 bits (1006), Expect = 2.700e-121 Identity = 254/684 (37.13%), Postives = 351/684 (51.32%), Query Frame = 1
Query: 1 DLGYCSTLPFHIELQPGTRPVKQRAYRHNPVITAKVQIEIDKLLEASIIRPSNSK*ASPLVVVVKPDVSIRLTCNYRRLNDATVAPFLPLSSIDEMLDALGGSNTFSVLN*ARGFWQCAMDMDSIALTAVCT*SGLYKSLGMPMGTSGSPGAFQRLMAEVCKGLQCTQLYLDDIIVHSNSVKCHVADLKSFLERITTHDLKLSPKKAHLGALEITCVGHLITPHGVSPDSKRNNALIKMPMPSNRGELHSLLVSISYLRKFVLGLSKEIRELNHHLCHDVPF-YVFGSACTSRQDNSE*SC*PDRTCISRLQRCSGRNTP--LPTHDRS*PKH--------GLGAVPEQLQPDNTLHPLLYVSRTTDNNEKNWGATDLECAALVWAIKKRRGFLYGVTFDAFTDHQPLLNYISLSERKPRVQRVCDILSQFQFNLRYKPGKRNHLAGALSRLPVPATEDDENACRILD-LHDVTIFFV---GR---SGITP----------------TSLR----SVWV-------VHAMQKP---------------LVRETRSLTTDEQLQLQWLWNRDSISPTTPASKYLTQRPST---RVYVPFLLRPWVMDCVHKEG-FHLGVHVTLASLERYYWWIGMSASVKWWVRNYFVCQAAKTSSRVARWPLISLPVPSRPGEMVSFDLLGRLP 1860
D G C +PF + + GT PV R YR NP++ KV +D+ L A +I+ S S ASPLVV+ K D S+R+T NY+RLN PL +D +LD+L FS+ + F Q D D++ LTA CT + L++ L M G + SP F +++ V GL+ YLDD+I HV +L F +R+ ++LKLSP KA +GA +GH I+P GVSPD + AL MP P+N +L SLL +SY RKF+ L+ ++R LN L VPF Y G + T +S L R P D S P G GA EQ Q D ++ P++Y+SR T E+NW DLE +VWAIK+ RG+L+ F ++DH+ L + + E RVQR + LS F + L+Y+ G N A LSRLP+PA + D+ +D + +F + GR S TP ++R SV+V V A+ L +T TTD+ + L L ++ + SP + T+ P T RVYVP L+RPWV+ H FHLGVH T LER+YWWIG+ SV+WW+R VCQA KTS + ARWP+I++P+P PG +V D G LP
Sbjct: 38 DFGSCIIMPFTLSVPAGTNPVASRPYRINPLMQNKVDAVLDQYLAAGLIQHSTSPWASPLVVIPKKDGSVRITVNYKRLNALVDLDGQPLPRVDGILDSLYTGKVFSIFDLNSAFHQIVCDEDTVPLTAFCTPTQLFEWLRMLQGANASPSWFVKVINRVVHGLERVLAYLDDVICFDEEPLGHVLNLIEFFKRLRQYNLKLSPGKARVGATHANFLGHTISPAGVSPDGVKVRALTHMPPPTNVKQLRSLLGGLSYYRKFLKNLATKVRPLNSLLKQGVPFKYTPGMVKVVK------------TLLSELARPPILVFPDWAAIEDNSRPLRLCSDACIDGFGASLEQEQLDGSVRPIVYISRATLPAERNWTVLDLEAGGIVWAIKRLRGYLWSTKFIIYSDHKALESIGKVGEHNARVQRWLEFLSNFTYTLKYRKGSANGNADFLSRLPLPAQDTDKTGPDCIDGVDQAGVFLIWACGRNYHSSSTPEVPLDKQDHPDRRASAAAIRNAGISVFVDCSCATGVFAVSGDPCIPDFAFSTDDVLVLAAKTSMHTTDDNITL--LVHKSATSPVGRSGGRTTRLPDTGVPRVYVPMLMRPWVLHACHTAASFHLGVHRTQRLLERFYWWIGLDRSVRWWLRACLVCQARKTSRQTARWPVIAMPLPQGPGTVVGVDFFGPLP 707
BLAST of mRNA_H-paniculata_contig20399.5282.1 vs. uniprot
Match: A0A6H5JUZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUZ4_9PHAE) HSP 1 Score: 390 bits (1003), Expect = 1.170e-117 Identity = 248/693 (35.79%), Postives = 354/693 (51.08%), Query Frame = 1
Query: 1 DLGYCSTLPFHIELQPGTRPVKQRAYRHNPVITAKVQIEIDKLLEASIIRPSNSK*ASPLVVVVKPDVSIRLTCNYRRLNDATVAPFLPLSSIDEMLDALGGSNTFSVLN*ARGFWQCAMDMDSIALTAVCT*SGLYKSLGMPMGTSGSPGAFQRLMAEVCKGLQCTQLYLDDIIVHSNSVKCHVADLKSFLERITTHDLKLSPKKAHLGALEITCVGHLITPHGVSPDSKRNNALIKMPMPSNRGELHSLLVSISYLRKFVLGLSKEIRELNHHLCHDVPFYVFGSACT-------SRQDNSE*SC*PDRTCISRLQRCSGRNTPLPTH-DRS*PKHGLGAVPEQLQPDNTLHPLLYVSRTTDNNEKNWGATDLECAALVWAIKKRRGFLYGVTFDAFTDHQPLLNYISLSERKPRVQRVCDILSQFQFNLRYKPGKRNHLAGALSRLPVPATEDDENACRIL--DLHDVTIFFVGRSGITPTSLRSVWVV----------------------------HAMQ----------------------KPLVRETRSLTTDEQLQ-----LQWLWNRDSISP----TTP---ASKYLTQRPSTRVYVPFLLRPWVMDCVHKEGF-HLGVHVTLASLERYYWWIGMSASVKWWVRNYFVCQAAKTSSRVARWPLISLPVPSRPGEMVSFDLLGRLP 1860
D G CS PF + + PG+ PV R YR NP + +V +D+ L A +I+ S S +SPLVV+ K +R+T NYR+LN LP+ +D+ LD L +S+ + F Q + D+I LTA T SGL++ L MP G+S +PG F +++ EV K L YLDD+IV ++ HV +++ ER+ TH+LKL+P KA +GA E +GH I+P GV P+ + AL KMPMP + +L SLL +SY RKF+ ++ IR L L F VF A S N PD +S R P + D S + G G EQ QPD ++ P++++SR T ++E++W DLE ++VW+IK+ RG+L+G F FTDH+ L ++ + E RVQR + L+ + + L Y+ G N A LSRLP+ A E D + L D + + F+ G+TP+ R+V V HA++ +P + E R L+ +L L L + + P T P A++ L P R+YVP L+RPW+M H + HLG TL+ LER+YWW+GMS KWWVR+ CQA K S + RWP + LP+PS PG VS D G LP
Sbjct: 253 DFGSCSLFPFKLTVPPGSAPVTSRPYRVNPPVAKQVDAILDQYLAAGLIQHSTSPYSSPLVVIPKKSGGVRITVNYRKLNKLCALSQLPIPRVDDTLDKLLKGRIYSLFDMKSSFHQITVHRDTIPLTAFVTSSGLFEWLKMPQGSSAAPGWFCKVVNEVIKNLHGVASYLDDLIVFDDNPASHVDTMRALFERLRTHNLKLTPPKATVGATEADFLGHTISPDGVRPNGAKVAALTKMPMPRDVKQLRSLLGGLSYYRKFLPNMATRIRPLTTLLKKQATF-VFTLAMEQAVRILLSELANPPVLVYPDWDAVSDGSR------PFRLYCDAS--RDGFGGTLEQEQPDGSIRPIVFISRATLDSERHWTPLDLEAGSIVWSIKRLRGYLWGTKFRIFTDHKSLEHFAKVGENNARVQRWLEFLTAYNYTLEYRKGSANGNADFLSRLPIDAAECDRSGRSRLTPDGDEEGVSFIRSCGLTPSVHRAVGVGLGGLVPTSPTSVLGGLAPSTDDFIDFRRHAIRFILLGRPSALPSYFLDHLPSARRPPLSEIRDLSNKGRLHVDDDGLVLLVRKQTTPPLSAATRPGGRAARLLNDEP-IRIYVPMLMRPWIMQACHADASCHLGAARTLSMLERFYWWVGMSVCTKWWVRHCLRCQARKASHQTPRWPTLCLPLPSGPGVSVSVDYFGPLP 935
BLAST of mRNA_H-paniculata_contig20399.5282.1 vs. uniprot
Match: A0A6H5JVY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVY6_9PHAE) HSP 1 Score: 394 bits (1012), Expect = 1.660e-117 Identity = 250/684 (36.55%), Postives = 350/684 (51.17%), Query Frame = 1
Query: 1 DLGYCSTLPFHIELQPGTRPVKQRAYRHNPVITAKVQIEIDKLLEASIIRPSNSK*ASPLVVVVKPDVSIRLTCNYRRLNDATVAPFLPLSSIDEMLDALGGSNTFSVLN*ARGFWQCAMDMDSIALTAVCT*SGLYKSLGMPMGTSGSPGAFQRLMAEVCKGLQCTQLYLDDIIVHSNSVKCHVADLKSFLERITTHDLKLSPKKAHLGALEITCVGHLITPHGVSPDSKRNNALIKMPMPSNRGELHSLLVSISYLRKFVLGLSKEIRELNHHLCHDVPF-YVFGSACTSRQDNSE*SC*PDRTCISRLQRCSGRNTP--LPTHDRS*PKH--------GLGAVPEQLQPDNTLHPLLYVSRTTDNNEKNWGATDLECAALVWAIKKRRGFLYGVTFDAFTDHQPLLNYISLSERKPRVQRVCDILSQFQFNLRYKPGKRNHLAGALSRLPVPATEDDENACRILD-LHDVTIFFV---GR---SGITP----------------TSLRSVWV-----------VHAMQKP---------------LVRETRSLTTDEQLQLQWLWNRDSISPTTPASKYLTQRPST---RVYVPFLLRPWVMDCVHKEG-FHLGVHVTLASLERYYWWIGMSASVKWWVRNYFVCQAAKTSSRVARWPLISLPVPSRPGEMVSFDLLGRLP 1860
D G C+ +PF + + GT+PV YR NP+I KV + D+ L A +I+ S ASPLVV+ K D S+R+T NY+RLN PL +D +LD+L FS+ + F Q D D++ LTA CT + L++ L MP G + SP F +++ V GL+ YLDD+I HV +L F +R+ ++LKLSP K +GA +GH I+P GVSPD + AL MP P+N +L SLL +SY RKF+ L+ ++R LN L VPF Y G + T +S L R P D S P G GA EQ Q D ++ P++Y+SR T E+NW DLE +VWAIK+ RG+L+ F ++DH+ L + + E RVQR + LS F + L+Y+ G N A LSRLP+PA + D+ +D + +F + GR S TP ++R+ + V A+ L +TR TTD+ + L + ++ + SP + T+ P T RVYVP L+RPWV+ H FHLGVH T LER+YWWIG+ SV+WW+R VCQA KTS + ARWP+I++P+P PG +V D G LP
Sbjct: 591 DFGSCTIMPFTLSVPAGTKPVASSPYRINPLIQKKVDVVSDQYLAAGLIQHCTSPWASPLVVIPKKDGSVRITVNYKRLNALVDLDGQPLPRVDGILDSLYTGKVFSIFDLNSAFHQIVCDEDTVPLTAFCTPTQLFEWLRMPQGANASPSWFVKVINRVVHGLERVLAYLDDVICFDEEPLGHVLNLIEFFKRLRQYNLKLSPGKGRVGATHANFLGHTISPAGVSPDGVKVRALTHMPPPTNVKQLRSLLGGLSYYRKFLKNLATKVRPLNSLLKQGVPFKYTPGMVKVVK------------TLLSELARPPILVFPDWAAIEDNSRPLRLCSDACIDGFGASLEQEQLDGSVRPIVYISRATLPAERNWTVLDLEAGGIVWAIKRLRGYLWSTKFIIYSDHKALESIGKVGEHNARVQRWLEFLSNFTYTLKYRKGSANGNADFLSRLPLPAQDTDKTGPDCIDGVDQAGVFLIWACGRNYHSSSTPEVPLDKQDHPDRRASAAAIRNAGIGVFVDCSCATGVFAVSGAPCIPDFAFSTDDVLVLAAKTRLHTTDDNITL--VVHKSATSPVGRSGGRTTRLPDTGVPRVYVPMLMRPWVLHACHTAASFHLGVHRTQRLLERFYWWIGLDRSVRWWLRACLVCQARKTSRQTARWPVIAMPLPQGPGTVVGVDFFGPLP 1260
BLAST of mRNA_H-paniculata_contig20399.5282.1 vs. uniprot
Match: A0A6H5K8H1_9PHAE (RT_RNaseH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8H1_9PHAE) HSP 1 Score: 367 bits (941), Expect = 2.620e-117 Identity = 204/440 (46.36%), Postives = 264/440 (60.00%), Query Frame = 1
Query: 1 DLGYCSTLPFHIELQPGTRPVKQRAYRHNPVITAKVQIEIDKLLEASIIRPSNSK*ASPLVVVVKPDVSIRLTCNYRRLNDATVAPFLPLSSIDEMLDALGGSNTFSVLN*ARGFWQCAMDMDSIALTAVCT*SGLYKSLGMPMGTSGSPGAFQRLMAEVCKGLQCTQLYLDDIIVHSNSVKCHVADLKSFLERITTHDLKLSPKKAHLGALEITCVGHLITPHGVSPDSKRNNALIKMPMPSNRGELHSLLVSISYLRKFVLGLSKEIRELNHHLCHDVPFYVFG------SACTSRQDNSE*SC*PDRTCISRLQRCSGRNTPLPTHDRS*PKHGLGAVPEQLQPDNTLHPLLYVSRTTDNNEKNWGATDLECAALVWAIKKRRGFLYGVTFDAFTDHQPLLNYISLSERKPRVQRVCDILSQFQFNLRYKPGKRNHL 1302
DLG+C+TLPF I+L+PGTRPVKQR YR +PVI K++IEID+L+ I+R S ASPLV V+K D S+RLTCN+ R N+AT+ P P+ + +++ ALGGS FSVL+ G++Q A+D SI LTAVCT GL + P G SGSP FQ LMA+ L+ L R T DLKLSPKKAH+G+ E+T +GHLITP V PD K+ +A+ KM MP + EL S+L S+SYLRKF+ L++ I +L L D F A ++ + E PD G T D S G GAV EQ Q D T+ PL+YVSR+T NE NW + LEC ALVWAI+K R LYG+ F+AFTDH+PLL++ S+ E+KPRVQR+ D LS + F L Y+ GK N +
Sbjct: 57 DLGHCTTLPFRIDLKPGTRPVKQRPYRRSPVINRKIKIEIDRLVSCGILRKFTSNWASPLVAVLKEDGSLRLTCNFTRSNEATIVPVFPMPLVSDLISALGGSKVFSVLDLMSGYFQAAIDESSIPLTAVCTSFGLSEWTRTPQGYSGSPANFQSLMAK----------------------------LRELLVRFTEFDLKLSPKKAHIGSAEVTFLGHLITPFSVRPDPKKTDAMAKMKMPKTKSELRSMLGSVSYLRKFLPNLARNITDLTALLEKDAHFKFTAHHEQLTKAVLAQLASYEVLAFPDYAAA-----IDGTRKFRLTTDAS--ISGFGAVLEQPQEDGTVSPLVYVSRSTLPNEANWDVSSLECGALVWAIRKLRDCLYGIPFEAFTDHKPLLSFFSMGEKKPRVQRMGDFLSAYSFTLSYRKGKDNRM 461
BLAST of mRNA_H-paniculata_contig20399.5282.1 vs. uniprot
Match: A0A6H5K3K5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3K5_9PHAE) HSP 1 Score: 377 bits (968), Expect = 2.500e-113 Identity = 262/744 (35.22%), Postives = 342/744 (45.97%), Query Frame = 1
Query: 52 TRPVKQRAYRHNPVITAKVQIEIDKLLEASIIRPSNSK*ASPLVVVVKPDVSIRLTCNYRRLNDATVAPFLPLSSIDEMLDALGGSNTFSVLN*ARGFWQCAMDMDSIALTAVCT*SGLYKSLGMPMGTSGSPGAFQRLMAEVCKGLQCTQLYLDDIIVHSNSVKCHVADLKSFLERITTHDLKLSPKKAHLGALEITCVGHLITPHGVSPDSKRNNALIKMPMPSNRGELHSLLVSISYLRKFVLGLSKEIRELNHHLCHDVPFYVFG------SACTSRQDNSE*SC*PDRTCISRLQRCSGRNTPLPTHDRS*PKHGLGAVPEQLQPDNTLHPLLYVSRTTDNNEKNWGATDLECAALVWAIKKRRGFLYGVTFDAFTDHQPLLNYISLSERKPRVQRVCDILSQFQFNLRYKPGKRNHLAGALSRLPVPA---------TEDDENACRILDLHDVTIFFVGRSGITPTSLRSVWVVHAMQKPLVRETRSLTTDEQLQLQW------------------------------------------------LWNRDSISPTTPASKYLTQRPST------------------------------------------------------------------------------RVYVPFLLRPWVMDCVHKEGFHLGVHVTLASLERYYWWIGMSASVKWWVRNYFVCQAAKTSSRVARWPLISLPVPSRPGEMVSFDLLGRLP 1860
TRPVKQR YR +PVI K++IEID+L+ I+ S S AS LV V+K D + LTCN+RRLN+AT+ P + + +++ ALGGS FSVL+ G++Q A+D SI LTAVCT GL++ P G SGSP FQ LMA+VC G + Q+ LDD+IV S +V HV L+ FL R T DL+LSPKKAH+G+ E+T +GHLITP G+ PD K+ +A+ KM MP + EL S+ S+SYLRKF+ L++ I +L L D F A ++ + E PD G T D S G GA EQ Q D T+ PL+Y+SR+ NE NW + LEC ALVW I G L V + + + + R+PR R + +PG+ G + P PA T A R H + RS P R+ ++P ++ T L RD +PT P Y + P RVYVPFLLRPW + VHKE HLG + TLASLERYY+WIGMS SV+W+V + CQA+KTS R RWPL+SLP+PSRPGEMV+FD+LG LP
Sbjct: 333 TRPVKQRPYRRSPVINRKIKIEIDRLVSCGILGKSTSNWASSLVAVLKKDGRLGLTCNFRRLNEATIVPVFTMPLVSDLISALGGSKVFSVLDLMSGYFQAAIDESSIPLTAVCTSFGLFEWARTPQGCSGSPANFQSLMAKVCDGFKRIQVCLDDVIVPSLTVAEHVVQLREFLVRFTEFDLQLSPKKAHIGSAEVTFLGHLITPVGLQPDPKKTDAMAKMKMPKTKSELRSIFGSVSYLRKFLPNLARNITDLTALLKKDAHFKFTAHHEQLTKAVLAQLASYEVLAFPDHAAA-----IDGTRKFRLTTDAS--ISGFGATLEQPQEDGTVRPLVYISRSILPNEANWDVSSLECGALVWTINCV-GLLVDVRVVTRSSRPSTRSTTAAAARRPRRARDVGVEES------PRPGRAATAHGDAA--PAPAGVRPSRPQGTPARTPAARGRGAHPSAAGYKQRSRRPPAQRRTATAAAREERPHADHPAAVPTTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPASGGRPRRPLERRDD-TPTIPQPPYQLRPPLPAADAGHHHRGAPGVEHVGGVPPRREQSRCQNLKRQQLAASEKFNRKTDLEWAAAQADDLRAAAVINGKFERLLGDEPHRVYVPFLLRPWALGVVHKESGHLGENATLASLERYYFWIGMSESVRWFVSHCIQCQASKTSRRAHRWPLVSLPLPSRPGEMVAFDILGPLP 1059
BLAST of mRNA_H-paniculata_contig20399.5282.1 vs. uniprot
Match: A0A6H5JVW3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVW3_9PHAE) HSP 1 Score: 378 bits (970), Expect = 6.520e-112 Identity = 232/654 (35.47%), Postives = 332/654 (50.76%), Query Frame = 1
Query: 1 DLGYCSTLPFHIELQPGTRPVKQRAYRHNPVITAKVQIEIDKLLEASIIRPSNSK*ASPLVVVVKPDVSIRLTCNYRRLNDATVAPFLPLSSIDEMLDALGGSNTFSVLN*ARGFWQCAMDMDSIALTAVCT*SGLYKSLGMPMGTSGSPGAFQRLMAEVCKGLQCTQLYLDDIIVHSNSVKCHVADLKSFLERITTHDLKLSPKKAHLGALEITCVGHLITPHGVSPDSKRNNALIKMPMPSNRGELHSLLVSISYLRKFVLGLSKEIRELNHHLCHDVPFYVFGSACTSRQDNSE*SC*PDRTCISRLQRCSGRNTPLPTHDRS*PKHGLGAVPEQLQPDNTLHPLLYVSRTTDNNEKNWGATDLECAALVWAIKKRRGFLYGVTFDAFTDHQPLLNYISLSERKPRVQRVCDILSQFQFNLRYKPGKRNHLAGALSRLPVPATEDDENACRILDLHD--------------VTIFFVGRSGI-----TPTSLRSVWVVHAMQKP-----------LVRETRSLTTDEQLQLQWLWNRDSISPTTPASKYLTQRPST---RVYVPFLLRPWVMDCVHKEG-FHLGVHVTLASLERYYWWIGMSASVKWWVRNYFVCQAAKTSSRVARWPLISLPVPSRPGEMVSFDLLGRLP 1860
D G C+ +PF + + GT+ V YR NP++ KV +D+ L A +I+ S S ASP+VV+ K + S+R+T NY+RLN PL +D +LD+L FS+ + F Q D D++ LTA CT + L++ L MP G + SP F +++ V GL+ YLDD+I HV +L F +R+ ++LKLSP KA +GA +GH I+P GVSPD + AL MP P+N +L SLL +SY RKF+ L+ ++R LN L VP C+ CI G GA EQ Q D ++ P++Y+SR E+NW DLE +VWAIK+ RG+L+ F ++DH+ L + + E R+QR + LS F + L+Y+ G N A LSRL +PA + D+ +D D + + +GI + + V A P L +TR TT++ + L L ++ + S + T+ P T RVYVP L+RPWV+ H FHLGVH T LER+YWWIG+ SV+WW+R VCQA KTS + RWP+I++P+P PG +V D G LP
Sbjct: 689 DFGSCTIMPFTLSVPAGTKSVASHPYRINPLMQKKVDAVLDQYLAAGLIQHSTSPWASPVVVIPKKEGSVRITVNYKRLNALVDLDGQPLPRVDGILDSLYTGKVFSIFDLNSAFHQIVCDKDTVPLTAFCTPTQLFEWLRMPQGANASPSWFVKVINRVVHGLERVLAYLDDVICFDEEPLGHVLNLIEFFKRLRQYNLKLSPGKARVGATHANFLGHTISPAGVSPDGVKVRALTHMPPPTNVKQLRSLLGGLSYYRKFLKNLATKVRPLNSLLKQGVPINRLLRLCSD-------------ACID----------------------GFGASLEQEQLDGSVRPIVYISRAALPAERNWTVLDLEAGGIVWAIKRLRGYLWSTKFIIYSDHKALESIGKVGEHNARLQRWLEFLSNFTYTLKYRKGSANGNADFLSRLTLPAQDTDKTGRDCIDGVDQAGPLDQQNHADRRASAAAIRNAGIGVFVDCSCATGAFAVSGAPCIPDFALSSDDVLVLAAKTRLHTTNDNIIL--LVHKSATSAVGRSGGRTTRLPDTGEFRVYVPMLMRPWVLHACHTAASFHLGVHRTQRLLERFYWWIGLDRSVRWWLRACLVCQARKTSRQTPRWPVIAMPLPHGPGTVVGVDFFGSLP 1305
BLAST of mRNA_H-paniculata_contig20399.5282.1 vs. uniprot
Match: A0A6H5K6L2_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L2_9PHAE) HSP 1 Score: 370 bits (949), Expect = 7.360e-110 Identity = 246/684 (35.96%), Postives = 341/684 (49.85%), Query Frame = 1
Query: 1 DLGYCSTLPFHIELQPGTRPVKQRAYRHNPVITAKVQIEIDKLLEASIIRPSNSK*ASPLVVVVKPDVSIRLTCNYRRLNDATVAPFLPLSSIDEMLDALGGSNTFSVLN*ARGFWQCAMDMDSIALTAVCT*SGLYKSLGMPMGTSGSPGAFQRLMAEVCKGLQCTQLYLDDIIVHSNSVKCHVADLKSFLERITTHDLKLSPKKAHLGALEITCVGHLITPHGVSPDSKRNNALIKMPMPSNRGELHSLLVSISYLRKFVLGLSKEIRELNHHLCHDVPF-YVFGSACTSRQDNSE*SC*PDRTCISRLQRCSGRNTP--LPTHDRS*PKH--------GLGAVPEQLQPDNTLHPLLYVSRTTDNNEKNWGATDLECAALVWAIKKRRGFLYGVTFDAFTDHQPLLNYISLSERKPRVQRVCDILSQFQFNLRYKPGKRNHLAGALSRLPVPATEDDENACRILD-LHDVTIFFV---GR---SGITP----------------TSLR----SVWV-------VHAMQKP---------------LVRETRSLTTDEQLQLQWLWNRDSISPTTPASKYLTQRPST---RVYVPFLLRPWVMDCVHKEG-FHLGVHVTLASLERYYWWIGMSASVKWWVRNYFVCQAAKTSSRVARWPLISLPVPSRPGEMVSFDLLGRLP 1860
D G C+ +PF + + GT+PV R YR NP++ KV +D+ L A +I+ S S ASPLVV+ K D S+R+T NY+RLN PL +D D++ LTA CT + L++ L MP G + SP F +++ V GL+ YLDD+I HV +L F +R+ ++LKLSP K +GA +GH I+P GVSPD + AL MP P+N +L SLL +SY RKF+ L+ ++R LN L VPF Y G + T +S L R P D S P G GA EQ Q ++ P++Y+SR T E+NW DLE +VWAIK+ RG+L+ F ++DH+ L + + E RVQR + LS F + L+Y+ G N A LSRLP+PA + D+ +D + +F + GR S TP ++R SV+V V A+ L +TR TTD+ + L L ++ + SP + T+ P T RVYVP L+RPWV+ H FHLGVH T LER+YWWIG+ SV+WW+R VCQA KTS + ARWP+I++P+P PG +V D G LP
Sbjct: 611 DFGSCTIMPFTLSVPAGTKPVASRPYRINPLMQKKVDAVLDQYLAAGLIQHSTSPWASPLVVIPKKDGSVRITVNYKRLNALVDLDGQPLPRVD----------------------------DTVPLTAFCTPTQLFEWLRMPQGANASPSWFVKVINRVVHGLERVLAYLDDVICFDEEPLGHVLNLIEFFKRLRQYNLKLSPGKGRVGATHANFLGHTISPAGVSPDGVKVRALTHMPRPTNVKQLRSLLGGLSYYRKFLKNLATKVRPLNSLLKQGVPFKYTPGMVKVVK------------TLLSELARPPILVFPDWAAIEDNSRPLRLCSDACIDGFGASLEQEQLHGSVRPIVYISRATLPAERNWTVLDLEAGGIVWAIKRLRGYLWSTKFIIYSDHKALESIGKVGEHNARVQRWLEFLSNFTYTLKYRKGSANGNADFLSRLPLPAQDTDKTGPDCIDGVDQAGVFLIWACGRNYHSSSTPEVPLDKQDHPDRRASAAAIRNAGISVFVDCSCATGVFAVSGAPCIPDFAFSTDDVLVLAAKTRLHTTDDNITL--LVHKSATSPVGRSGGRTTRLPDTGVPRVYVPMLMRPWVLHACHTAASFHLGVHRTQRLLERFYWWIGLDRSVRWWLRACLVCQARKTSRQTARWPVIAMPLPQGPGTVVGVDFFGPLP 1252
BLAST of mRNA_H-paniculata_contig20399.5282.1 vs. uniprot
Match: A0A6H5KRJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRJ8_9PHAE) HSP 1 Score: 370 bits (950), Expect = 1.560e-109 Identity = 249/667 (37.33%), Postives = 341/667 (51.12%), Query Frame = 1
Query: 49 GTRPVKQRAYRHNPVITAKVQIEIDKLLEASIIRPSNSK*ASPLVVVVKPDVSIRLTCNYRRLNDATVAPFLPLSSIDEMLDALGGSNTFSVLN*ARGFWQCAMDMDSIALTAVCT*SGLYKSLGMPMGTSGSPGAFQRLMAEVCKGLQCTQLYLDDIIVHSNSVKCHVADLKSFLERITTHDLKLSPKKAHLGALEITCVGHLITPHGVSPDSKRNNALIKMPMPSNRGELHSLLVSISYLRKFVLGLSKEIRELNHHLCHDVPF-YVFGSACTSRQDNSE*S-----C*PDRTCI---SRLQR-CSGRNTPLPTHDRS*PKHGLGAVPEQLQPDNTLHPLLYVSRTTDNNEKNWGATDLECAALVWAIKKRRGFLYGVTFDAFTDHQPLLNYISLSERKPRVQRVCDILSQFQFNLRYKPGKRNHLAGALSRLPVPATEDDENACRILD-LHDVTIFFV---GR---SGITP----------------TSLR----SVWV-------VHAMQKP---------------LVRETRSLTTDEQLQLQWLWNRDSISPTTPASKYLTQRPST---RVYVPFLLRPWVMDCVHKEG-FHLGVHVTLASLERYYWWIGMSASVKWWVRNYFVCQAAKTSSRVARWPLISLPVPSRPGEMVSFDLLGRLP 1860
GT+ V R YR NP++ K +D+ L A +I+ S S ASPLVV+ K D S+R+T NY+RLN L +D +LD L FS+ + F Q D D++ LTA CT + ++ L MP G + SP F +++ V GL+ YLDD+I HV +L F +R+ ++LKLS KA +GA +GH I+P GVSPD + AL MP P+N +L SLL +SY RKF+ L+ ++R LN L VPF Y G + SE + PD I SRL R CS G GA EQ Q D ++ P++Y+SR T E+NW DLE +VWAIK+ RG L+ F ++DH+ L + + E RVQR + LS F + L+Y+ G N A LSRLP+PA + D+ +D + +F + GR S TP ++R SV+V V A+ L +TR TTD+ + L L ++ SP + T+ P T RVYVP L+RPWV+ H FHLGVH T LER+YWWIG+ SV+WW+R VCQA KTS + ARWP+I++P+P PG +V D G LP
Sbjct: 714 GTKSVASRPYRINPLMQNKADAVLDQYLAARLIQHSTSPWASPLVVIPKKDGSVRITVNYKRLNALVDLDGQHLPRVDGILDTLYTGKVFSIFDLNSAFPQIVCDEDTVPLTAFCTPTQFFEWLRMPQGANASPSWFIKVINRVVHGLERVLAYLDDVICFDEEPLGHVVNLIEFFKRLRQYNLKLSSGKARVGATHANFLGHTISPAGVSPDGVKVRALTHMPPPTNVKQLRSLLGGLSYYRKFLKNLATKVRPLNSLLKQGVPFKYTPGMVKVVKTLLSELARPPILVFPDWAAIEDNSRLLRLCSDACI-----------DGFGASLEQEQLDGSVRPIVYISRATLPAERNWTVLDLEAGGIVWAIKRLRGCLWSTKFIIYSDHKALESIGKVGEHNARVQRWLEFLSNFTYTLKYRKGSANGNADFLSRLPLPAQDTDKTGPDCIDGVDQAGVFLIWACGRNYHSSSTPEVPLDKQDHPDRRASAAAIRNAGISVFVDCSCATGVFAVSGAPCIPDFAFSTDDVLVLAAKTRLHTTDDNITL--LVHKSVTSPVGRSGGRTTRLPDTGVPRVYVPMLMRPWVLHACHTAASFHLGVHRTQRLLERFYWWIGLDRSVRWWLRACLVCQARKTSRQTARWPVIAMPLPQGPGTVVGVDFFGPLP 1367
BLAST of mRNA_H-paniculata_contig20399.5282.1 vs. uniprot
Match: A0A6H5KRW3_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRW3_9PHAE) HSP 1 Score: 340 bits (871), Expect = 5.100e-104 Identity = 190/480 (39.58%), Postives = 278/480 (57.92%), Query Frame = 1
Query: 118 IDKLLEASIIRPSNSK*ASPLVVVVKPDVSIRLTCNYRRLNDATVAPFLPLSSIDEMLDALGGSNTFSVLN*ARGFWQCAMDMDSIALTAVCT*SGLYKSLGMPMGTSGSPGAFQRLMAEVCKGLQCTQLYLDDIIVHSNSVKCHVADLKSFLERITTHDLKLSPKKAHLGALEITCVGHLITPHGVSPDSKRNNALIKMPMPSNRGELHSLLVSISYLRKFVLGLSKEIRELNHHLCHDVPFYVFGSACTSRQDNSE*SC*PDRTCISRLQRC-SGRNTPLPTHDRS*PKHGLGAVPEQLQPDNTLHPLLYVSRTTDNNEKNWGATDLECAALVWAIKKRRGFLYGVTFDAFTDHQPLLNYISLSERKPRVQRVCDILSQFQFNLRYKPGKRNHLAGALSRLPVPATEDDENA-CRILDLHDVTIFFVGRSGITPTSLRSVWVVHAMQKPLVRETRS-----------LTTDEQLQLQW 1518
+DKLL A ++R S S AS LVVV K + +RLT NY+++N +V P LP+ ++++L L + FS L+ GF+QC ++ DSI +TAV T +GLY+ + MP G S SPG F +M VC GL+ +L++DD+IV+S + HV DL+ F ER+T +LKL+PKKA LG +T + H +T G+ P K+ +++MPMP+N +L S+L S+SY RKF+ G+S ++ + L D F Q+ + P+ + +G+ D S GLGAV EQ Q D T+ PL Y+SR+T NE+ W AT+LEC A+VWAIKK R YG+ F ++DHQPL N SL+E+ RVQR D LS + + L Y+PGK N A +SRLP+P E+D + R+ D D+ ++ +G SG+ P + V + ++P + R TTDE+ W
Sbjct: 1 MDKLLLAGVLRRSYSNWASSLVVVAKANGGVRLTVNYKKVNQMSVIPKLPIPVVEDILADLKSAKIFSTLDLISGFFQCCIEEDSIPITAVITATGLYEFMAMPQGLSSSPGWFHSVMQRVCDGLERVRLFIDDVIVYSRNGAEHVQDLERFFERMTKFNLKLAPKKAQLGVKVVTFLEHQVTAEGIEPCPKKVKPMLQMPMPTNVSQLRSILGSLSYYRKFLKGMSAKLHSVTALLKKDAKFAFTAKHAEVIQEMKDKLSSPEVLAFPDYEGAITGKRKFRLITDAS--ISGLGAVIEQEQEDGTVRPLCYLSRSTYPNERRWSATELECGAIVWAIKKNRTLFYGIPFQIYSDHQPLRNLESLAEKNNRVQRWFDFLSAYTYELIYRPGKANGNADCMSRLPLPPMEEDASPEMRLTDPSDLDVYMIGASGVIPARMGPV--LGGRKRPTQADPRKNFVLGEDDHQPFTTDEEADRTW 476 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20399.5282.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig20399.5282.1 >prot_H-paniculata_contig20399.5282.1 ID=prot_H-paniculata_contig20399.5282.1|Name=mRNA_H-paniculata_contig20399.5282.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=157bp MPMGTSGSPGAFQRLMAEVCKGLQCTQLYLDDIIVHSNSVKCHVADLKSFback to top mRNA from alignment at H-paniculata_contig20399:1946..4283+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig20399.5282.1 ID=mRNA_H-paniculata_contig20399.5282.1|Name=mRNA_H-paniculata_contig20399.5282.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2338bp|location=Sequence derived from alignment at H-paniculata_contig20399:1946..4283+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig20399:1946..4283+ >mRNA_H-paniculata_contig20399.5282.1 ID=mRNA_H-paniculata_contig20399.5282.1|Name=mRNA_H-paniculata_contig20399.5282.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=942bp|location=Sequence derived from alignment at H-paniculata_contig20399:1946..4283+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |