|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 657 |
| Cds size | 654 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2039.5280.1 >prot_H-paniculata_contig2039.5280.1 ID=prot_H-paniculata_contig2039.5280.1|Name=mRNA_H-paniculata_contig2039.5280.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=218bp
ANGKKIRAGELAATIEDKIKLLARNRDTESEAKKSADSAERMSKENEVHN
KAELARLTAILEEEIEITASKARDLDTLRHKNKGIEDCLREKADSQTLLA
DAAEERATVLRDDIKAAMKPRLPEDNEGRVRSDGYTGGVNWEVSQKSEGT
LKAEFCHKRRKGAVDQQEKDKILQVTMDLNDGEFHEHKGKLLGRGACGAV
YQTSLQDGTGEVFALKLL back to topmRNA from alignment at H-paniculata_contig2039:12811..14319+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2039.5280.1 ID=mRNA_H-paniculata_contig2039.5280.1|Name=mRNA_H-paniculata_contig2039.5280.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1509bp|location=Sequence derived from alignment at H-paniculata_contig2039:12811..14319+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCAAACGGTAAAAAAATCCGTGCCGGCGAGCTGGCAGCAACTATCGAAGA
CAAGATCAAACTTCTCGCTCGGAATCGGGACACAGAGTCCGAGGCGAAGA
AGAGCGCGGATAGCGCCGAGCGTATGGTGAGCAACAACGATCATAAATGA
TAGGGTTATACTTTTTCCTACCGAAACAAATGGGCCGTGTCGTTCATGCC
GTACCGATTGTGCTTCACTCTTACCTGTGCCCCTGTTGTATCAGGGCTTG
ACACAAGGGGATGGTTTGATCTTTGTAGCTCCACAACCAAAGAAATACGA
GCGATGTCTGCATCCGACCGGTCTCTATGCTGCGTGCATATATCCCTTCA
ACAAACAGCCCTTTCGTCTGAGCTAGGTCAAACGATAGTCGCAGTGAGTC
GCGAGGGGGAGGCACGATCATCACCACCACGCTGTTTTTTTCGTGGTAAT
AGGACACGACTGAGTAGAGTCCATGTGATAAAGAGGACGTTTGGTCGCAA
GTTAATCTAAGACATTCGCAAAACCTCCGCACAGAAAGTATGGGGTCTCA
ATGATGGACACACGTGCGCACGTTTCCCCACCCTCCGATGCGGTTTAGTC
AAAAGAAAATGAGGTTCACAACAAGGCCGAACTTGCCAGGCTCACCGCAA
TCCTGGAGGAGGAGATCGAAATCACCGCCAGCAAGGCTAGGGATCTAGAT
ACGGTGAGCCGTCGGGGGAGAGTAGGGAAGCGGGGGCGGGGGTCTTTGTA
CCTGAATATCTTGAACACTAGCTATTGATAGGCTGATATCTACTACACCT
TGAGAACAGGGGTGGTGTGAATGATTATCGTTGTGGTACGATATTTCGCG
AGAGGTTTATCTTCGGGATATATATGGTAAACGTTTTTGTGCATAACTGA
AGGACGGTCTTCGTTCTGTAGGGGATAGCTGCGCACCCTGGCTACACCAT
AAGCCCCCCCCCCCCCCTTATCGCGCGCAAATTGCCGGCTATCGCCAACA
ACCAATGAGCATTAATTTTTGCATCACCGCCCTGCGCCCCCCCCGCCCAA
TCTTTTCCCCCCACGGGATTGGTTGACAACTTCAGCTTCGCCATAAAAAC
AAGGGAATCGAAGATTGCCTCCGAGAGAAAGCCGATTCGCAGACTCTTCT
CGCCGACGCCGCGGAAGAGCGGGCGACTGTCCTGCGTGATGACATCAAAG
CCGCGATGAAGCCGCGTCTCCCTGAGGACAACGAAGGGAGGGTACGGTCG
GACGGATACACCGGTGGTGTAAACTGGGAGGTTTCCCAAAAGAGCGAAGG
GACTCTGAAGGCGGAGTTCTGCCATAAAAGGCGAAAAGGGGCCGTGGACC
AGCAGGAAAAAGACAAGATTCTGCAGGTAACAATGGATCTGAACGATGGT
GAGTTCCATGAGCACAAGGGTAAGCTCCTGGGACGAGGTGCCTGCGGAGC
AGTGTACCAAACAAGCCTTCAGGACGGGACCGGCGAGGTCTTTGCGTTGA
AGCTCCTTG back to topCoding sequence (CDS) from alignment at H-paniculata_contig2039:12811..14319+ >mRNA_H-paniculata_contig2039.5280.1 ID=mRNA_H-paniculata_contig2039.5280.1|Name=mRNA_H-paniculata_contig2039.5280.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1308bp|location=Sequence derived from alignment at H-paniculata_contig2039:12811..14319+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCAAACGGTAAAAAAATCCGTGCCGGCGAGCTGGCAGCAACTATCGAAGA
CAAGATCAAACTTCTCGCTCGGAATCGGGACACAGAGTCCGAGGCGAAGA
AGAGCGCGGATAGCGCCGAGCGTATGGCAAACGGTAAAAAAATCCGTGCC
GGCGAGCTGGCAGCAACTATCGAAGACAAGATCAAACTTCTCGCTCGGAA
TCGGGACACAGAGTCCGAGGCGAAGAAGAGCGCGGATAGCGCCGAGCGTA
TGTCAAAAGAAAATGAGGTTCACAACAAGGCCGAACTTGCCAGGCTCACC
GCAATCCTGGAGGAGGAGATCGAAATCACCGCCAGCAAGGCTAGGGATCT
AGATACGTCAAAAGAAAATGAGGTTCACAACAAGGCCGAACTTGCCAGGC
TCACCGCAATCCTGGAGGAGGAGATCGAAATCACCGCCAGCAAGGCTAGG
GATCTAGATACGCTTCGCCATAAAAACAAGGGAATCGAAGATTGCCTCCG
AGAGAAAGCCGATTCGCAGACTCTTCTCGCCGACGCCGCGGAAGAGCGGG
CGACTGTCCTGCGTGATGACATCAAAGCCGCGATGAAGCCGCGTCTCCCT
GAGGACAACGAAGGGAGGGTACGGTCGGACGGATACACCGGTGGTGTAAA
CTGGGAGGTTTCCCAAAAGAGCGAAGGGACTCTGAAGGCGGAGTTCTGCC
ATAAAAGGCGAAAAGGGGCCGTGGACCAGCAGGAAAAAGACAAGATTCTG
CAGGTAACAATGGATCTGAACGATGGTGAGTTCCATGAGCACAAGGGTAA
GCTCCTGGGACGAGGTGCCTGCGGAGCAGTGTACCAAACAAGCCTTCAGG
ACGGGACCGGCGAGGTCTTTGCGTTGAAGCTCCTTCTTCGCCATAAAAAC
AAGGGAATCGAAGATTGCCTCCGAGAGAAAGCCGATTCGCAGACTCTTCT
CGCCGACGCCGCGGAAGAGCGGGCGACTGTCCTGCGTGATGACATCAAAG
CCGCGATGAAGCCGCGTCTCCCTGAGGACAACGAAGGGAGGGTACGGTCG
GACGGATACACCGGTGGTGTAAACTGGGAGGTTTCCCAAAAGAGCGAAGG
GACTCTGAAGGCGGAGTTCTGCCATAAAAGGCGAAAAGGGGCCGTGGACC
AGCAGGAAAAAGACAAGATTCTGCAGGTAACAATGGATCTGAACGATGGT
GAGTTCCATGAGCACAAGGGTAAGCTCCTGGGACGAGGTGCCTGCGGAGC
AGTGTACCAAACAAGCCTTCAGGACGGGACCGGCGAGGTCTTTGCGTTGA
AGCTCCTT back to top
|