mRNA_H-paniculata_contig20370.5276.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig20370.5276.1
Unique NamemRNA_H-paniculata_contig20370.5276.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig20370.5276.1 vs. uniprot
Match: A0A0J7KHD5_LASNI (Retrotransposon ty1-copia subclass n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KHD5_LASNI)

HSP 1 Score: 286 bits (731), Expect = 1.650e-83
Identity = 169/457 (36.98%), Postives = 264/457 (57.77%), Query Frame = 1
Query:    1 EGLKGPEAEKWRAAIEEEWGALVKNGTWESEDPRRLPAGRKAIRTKWTFKRKLKGDGSVARNKVRLVAQGFSLVEDEDFFETSAPVARMTTLRTVFSLAAEHDFELEGMDIDAAYLNASVEEELFVKLPSEFFPFYRDIPFVRRLRKSLDRKWNNTLDDFLVGIGLDLRRDRSNGTITISQGSYIREVLKRCGFDECRGVPTRVEGKV---KTSAPHSRRRSGNSTEIRGMVGSLMYASTGTRPVIAYAVHQAARRMEDPCREDFSTYKRIFRYLSTVPDRSIMFGGRGSGHGLEGFV---GADWAEDVEDRKSTTGYIFKLNGGTISWCSRKQQLVSWSSTEAEYVAAGEEGKETVYLRELLGSIDFGCKGSTTLF*DNKSAINLSKGSRAHYRTKHIGVRWYRIRESIRKGVLALKYVQTSDQLADILTKALSKG-FTCRAISKCQFSILAIDWI 1350
            E +  P+   W+ A++EE  +L+KNGTW   D   LP GR+AI  KW FK K    G + R K RLVA+G++   + D+ ET +PV R  ++R + ++AA+ D E+   D+  A+L  +++EE+++ +P +  P    +  V ++   L  ++  T+      IGL+++RD    TI ISQ +Y+  V ++ G  + +G+ T  E +V    TS  ++ +R       R  VGSLM+A+  +RP I +AV   +R +E+P  E +   KRI RY        I++     GH  +G +    +D+A D + R+ST+GY+  L GG +SW S++Q++V+ S+TEAEYVAA +  KE +++R LL S+    KG   +  DN+ +I L K    H RTKHI VR++ IRE  + G + +KYV +S QLADILTKAL K  F    I   Q  I+AI+++
Sbjct:  493 EAILRPDGATWQKAVDEELASLMKNGTWCEAD---LPPGRQAISAKWVFKLKRGPSGEIVRYKARLVARGYAQRPNVDYTETYSPVVRYESVRALLAIAAQQDMEIAQGDVKTAFLYGTLDEEIYMTVP-DGAPNAGQVTAVDKVMDYLMTEFEVTIGSTEYFIGLEIKRDCIVRTIKISQRNYLLRVAEKIGLADAKGISTPAESRVYLSTTSEDNNDKRDMEKVPFREAVGSLMFAACVSRPDIMFAVSVVSRYLENPGLEHWQAVKRIIRYAKETAAYGIVY----DGHNTDGLIIYSDSDYATDPDTRRSTSGYVTVLAGGAVSWMSQRQRIVALSTTEAEYVAASDATKEAIWIRRLLESVGVNKKGPIEMRLDNQGSIKLIKNPEFHKRTKHIDVRFHYIREIYKNGQIDIKYVPSSKQLADILTKALPKSTFESNRIGL-QIMIVAINYL 940          
BLAST of mRNA_H-paniculata_contig20370.5276.1 vs. uniprot
Match: X1WUQ9_ACYPI (Integrase catalytic domain-containing protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=X1WUQ9_ACYPI)

HSP 1 Score: 276 bits (706), Expect = 5.000e-80
Identity = 157/454 (34.58%), Postives = 254/454 (55.95%), Query Frame = 1
Query:    7 LKGPEAEKWRAAIEEEWGALVKNGTWESEDPRRLPAGRKAIRTKWTFKRKLKGDGSVARNKVRLVAQGFSLVEDEDFFETSAPVARMTTLRTVFSLAAEHDFELEGMDIDAAYLNASVEEELFVKLPSEFFPFYRDIPFVRRLRKSL------DRKWNNTLDDFLVGI----------------------GLDLRRDRSNGTITISQGSYIREVLKRCGFDECRGVPTRVEGKVKTSAPHSRRRSGNSTEIRGMVGSLMYASTGTRPVIAYAVHQAARRMEDPCREDFSTYKRIFRYLSTVPDRSIMFGGRGSGHGLEGFVGADWAEDVEDRKSTTGYIFKLNGGTISWCSRKQQLVSWSSTEAEYVAAGEEGKETVYLRELLGSIDFGCKGSTTLF*DNKSAINLSKGSRAHYRTKHIGVRWYRIRESIRKGVLALKYVQTSDQLADILTKAL 1284
            + G  A  W+ +I++E  +L KN TW       LP GRK + TKW FK K    GSV + K RLVAQGFS  E  D+++T +PVA++TTLRT+ ++A + ++ L+ +D+  A+L   + E+++++ P E   +  D+  + +L KSL       + W+   D+++  +                      GL +  D++ G + I+Q  Y+ +VLK+   D C  + T +E K+     + +     +   R +VGSLMYA  G+RP ++YA++   R    P +  ++  KR+ RY+    +  + F  + +   L GFV ADWA    DRKSTTGY+FK+    +SW +++Q  V+ SSTEAEY+A      E +++R+LL  +D    G   LF DN+ AI+LS     H R+KHI  + + +RE +++ ++ LKY+ TS+QLAD+L+K L
Sbjct:  525 VTGVYANLWKNSIQDEIDSLKKNNTWTLSH---LPKGRKVVGTKWVFKIKRDSIGSVKKYKARLVAQGFSQKEGVDYYDTYSPVAKLTTLRTLLAIAVQRNWFLQQLDVKTAFLYGILTEDIYIEQP-EGLNYNSDM--ILKLNKSLYGLKQASKCWHERFDNYIAKLEIKSYLKEEFEMEDNGDLNYFLGLKINYDKTVGKLYINQTQYLEDVLKKFNMDNCNTISTPIESKLNIQEDNKQE---CNQPYRQLVGSLMYAMLGSRPDLSYALNFFCRYQSKPNKCHWNHLKRVLRYVKGTLNNGLCFHRQSNSTELIGFVDADWASSTIDRKSTTGYLFKVFNCLVSWSTKRQPTVALSSTEAEYMAVSNATCEAIWIRKLLKDLDVTICGPVILFEDNQGAIHLSSSQELHKRSKHIDTKHHFVREKVKEELIELKYIPTSNQLADLLSKGL 969          
BLAST of mRNA_H-paniculata_contig20370.5276.1 vs. uniprot
Match: A0A176WHF9_MARPO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Marchantia polymorpha subsp. ruderalis TaxID=1480154 RepID=A0A176WHF9_MARPO)

HSP 1 Score: 257 bits (656), Expect = 1.550e-77
Identity = 158/424 (37.26%), Postives = 244/424 (57.55%), Query Frame = 1
Query:   43 IEEEWGALVKNGTWESEDPRRLPAGRKAIRTKWTFKRKLKGDGSVARNKVRLVAQGFSLVEDEDFFETSAPVARMTTLRTVFSLAAEHDFELEGMDIDAAYLNASVEEELFVKLPSEFFPFYRDIPFVRRLR---KSLDRKWNNTLDDFLVGIGLDLRRDRSNGTITISQGSYIREVLKRCGFDECRGVPTRVEGKVKTSAPHSRRRSGNSTEIRGM-----VGSLMYASTGTRPVIAYAVHQAARRMEDPCREDFSTYKRIFRYLSTVPDRSIMFGGRGSGHGLEGFVGADWAEDVEDRKSTTGYIFKLNGGTISWCSRKQQLVSWSSTEAEYVAAGEEGKETVYLRELLGSIDFGCKGSTTLF*DNKSAINLSKGSRAHYRTKHIGVRWYRIRESIRKGVLALKYVQTSDQLADILTKALSK 1290
            +E+E+ +L KN TW   +   LPAG+  +  KW +K K K DGS  R K +LVA+G+S V   DF ET   V +MT++R + +LAA+++ EL  MD+  A LN  + EE+++ +       +       +L+   K +D      L+D    +G+ + R+R  G I ISQ  Y+ E L R    +C+ + T +E  +K S   S    G S E++ +     VGSL +A   TR  I++AV   A+ M +     +   KRIFRYL  + D  ++F       GL G+  ADW   ++ R ST+GY F+LNGGTISW S+KQ+ V+ SS EAEY+A  +   ET++LRELL  + F  + STT+F DN+SAI+  +  + H R+KHI +R++ +R+ +   ++ L YV T + +AD++TK L++
Sbjct:    1 MEDEFSSLKKNHTWTLTE---LPAGKNVVGCKWIYKIKYKPDGSGDRYKAKLVAKGYSHVYGVDFSETFFLVVKMTSIRVLMALAAQYNLELHQMDVKTAILNGRLHEEVYMVILEGLKVSFEKNKIKEKLKTEFKMVD------LEDIHHCLGMQVDRNREEGWIRISQPRYLVEKLARFNMADCKPIDTPMEPGLKLSTLDSPNSVGESEEVKNIPYQAAVGSLTWAMV-TRSDISFAVSSVAQFMSNLGLTHWKLVKRIFRYLRGILDFGLVFTRVDKPSGLTGYSDADWGGCLDTRLSTSGYCFQLNGGTISWISKKQKSVTLSSIEAEYMALSKARAETMWLRELLTDLGFELE-STTIFCDNQSAISQIENHKYHKRSKHIDIRYHFVRDLVTNNLVKLVYVPTEEMIADVMTKPLAR 413          
BLAST of mRNA_H-paniculata_contig20370.5276.1 vs. uniprot
Match: A0A0C9VSW1_SPHS4 (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sphaerobolus stellatus (strain SS14) TaxID=990650 RepID=A0A0C9VSW1_SPHS4)

HSP 1 Score: 260 bits (665), Expect = 6.080e-76
Identity = 166/495 (33.54%), Postives = 243/495 (49.09%), Query Frame = 1
Query:    1 EGLKGPEAEKWRAAIEEEWGALVKNGTWESEDPRRLPAGRKAIRTKWTFKRKLKGDGSVARNKVRLVAQGFSLVEDEDFFETSAPVARMTTLRTVFSLAAEHDFELEGMDIDAAYLNASVEEELFVKLPSEF----------------------------------------------------------------FPFYRDIPFVRRLRKSLDRKWNNT-LDDFLVGIGLDLRRDRSNGTITISQGSYIREVLKRCGFDECRGVPTRVEGKVKTSAPHSRRRSGNSTEIRGMVGSLMYASTGTRPVIAYAVHQAARRMEDPCREDFSTYKRIFRYLSTVPDRSIMFGGRGSGHGLEGFVGADWAEDVEDRKSTTGYIFKLNGGTISWCSRKQQLVSWSSTEAEYVAAGEEGKETVYLRELLGSIDFGCKGSTTLF*DNKSAINLSKGSRAHYRTKHIGVRWYRIRESIRKGVLALKYVQTSDQLADILTKALSK 1290
            E +  P+A+KW+A   EE                 L  GR+ +  +WTFK K    G + R K RLVA+GF+ V+  D+ E  APV + T++RT+ +L  E D E+  MD+  A+LN  ++EE+++ LP  F                                                                  F   I  V++++K L  K+  T L +    +G+++ RDR + T++ISQ +Y  E+L+R G  +C+  PT +E  V  S         +S   +  VGSLMY   GT P +A++V   ++    P  E     KR+ RY+    D  ++F G G+   +E F+ ADWA+D  +R S TGY+  L G TISW S+KQ   + SSTEAEY+AA    KE ++LR  +  + F     T L+ DN+SAI L K S  H RTKHI VR++ IRE++    + L Y+ T DQ+AD LTK LSK
Sbjct:  223 EAMSRPDADKWKAVCTEEL----------------LLRGRRVVDCRWTFKEKRGPKGEILRYKARLVAKGFTQVKGVDYNEMFAPVVKFTSIRTLLALTTELDLEIHQMDVKTAFLNRDLKEEIYMNLPPGFRKPGVIWKLKKGLYGLKQASREWYKKLCTEFESMGFRRCNSNHAVFIKDDNGIRVVVAVYVDDLLIFSSSIEAVKKVKKDLKGKFEMTDLGEAHWILGMEITRDRPSHTLSISQKAYFAEILERFGMSDCKPAPTPME--VGVSLRKLSEAEVDSQHYQSAVGSLMYGMIGTHPDVAHSVGVLSQHCATPGEEHEKGNKRVLRYIKGTTDLGLVFIGSGNTK-IEVFIDADWAQDKNNRHSLTGYVCTLAGATISWSSKKQSSTAQSSTEAEYMAATHAAKEALWLRMFMRELGFEQDSPTPLYVDNQSAITLVKNSEFHSRTKHINVRYHFIRENVEDEQIELVYIPTEDQVADALTKGLSK 698          
BLAST of mRNA_H-paniculata_contig20370.5276.1 vs. uniprot
Match: A0A2N9ER08_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9ER08_FAGSY)

HSP 1 Score: 266 bits (681), Expect = 7.250e-76
Identity = 172/458 (37.55%), Postives = 259/458 (56.55%), Query Frame = 1
Query:    1 EGLKGPEAEKWRAAIEEEWGALVKNGTWESEDPRRLPAGRKAIRTKWTFKRK-LKGDGSVARNKVRLVAQGFSLVEDEDFFETSAPVARMTTLRTVFSLAAEHDFELEGMDIDAAYLNASVEEELFVKLPSEFF-PFYRDIPFVRRLRKSL------DRKWNNTLDDFL--------VG-----IGLDLRRDRSNGTITISQGSYIREVLKRCGFDECRGVPTRVEGKVKTSAPHSRRRSGNSTEIRGM--------VGSLMYASTGTRPVIAYAVHQAARRMEDPCREDFSTYKRIFRYLSTVPDRSIMFGGRGSGHGLEGFVGADWAEDVEDRKSTTGYIFKLNGGTISWCSRKQQLVSWSSTEAEYVAAGEEGKETVYLRELLGSIDFGCKGSTTLF*DNKSAINLSKGSRAHYRTKHIGVRWYRIRESIRKGVLALKYVQTSDQLADILTKALS 1287
            E ++  E +KW  A+ EE  +L KN TWE  +   LP G+K I  KW FK+K    +    R K RLVA+G+S     D+ E  +PV R T++R V +L A+ D ELE +D+  A+L+ ++EEE+F++ P  F  P   ++  V RL+KSL       R+W   L   L        +G     +G+++RRDR    + +SQ +YIR+VL++    + + V T +    + S     +   N  EI  M        VG LMYA   TR  +A+AV   +R M +P RE ++  K IFRYL    +  I+F  +   + + G+V AD+A +V+DR+STTGY+F L+GG I W S  Q +V+ S+TEAEY+A  E  KE ++L+ L+  +    +G   +  D++SAI L+K    H RTKHI VR+++IRE I  G + L+ V TS+  AD+LTK ++
Sbjct:  667 EAIESSEKDKWMEAMVEENESLSKNKTWELTE---LPKGKKPIGCKWVFKKKEAVSEKEGERFKARLVAKGYSQRHGIDYDEVFSPVVRHTSIRAVLALVADQDLELEQLDVKTAFLHGNLEEEIFMEQPEGFKQPGTENL--VCRLKKSLYGLKQSPRQWYKRLKSLLHKEFEMKDLGAAKKILGMEIRRDRGARKLWLSQKNYIRKVLEKFSMLDAKPVSTPLANHFRLSGSQCPK---NEEEIENMSKVPYASAVGCLMYAMVCTRLDLAHAVSTVSRYMANPGREHWNAVKWIFRYLKGTAEHGILFSRQPGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSGGPICWKSTLQSIVAMSTTEAEYMAVAEAAKEALWLKGLVKELGLN-QGGVQMHCDSQSAIYLAKNQVYHARTKHIDVRFHKIRELIVTGDIVLEKVHTSENAADMLTKPVT 1115          
BLAST of mRNA_H-paniculata_contig20370.5276.1 vs. uniprot
Match: A0A2N9GEP0_FAGSY (Integrase catalytic domain-containing protein n=2 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GEP0_FAGSY)

HSP 1 Score: 259 bits (662), Expect = 2.420e-75
Identity = 162/441 (36.73%), Postives = 253/441 (57.37%), Query Frame = 1
Query:    1 EGLKGPEAEKWRAAIEEEWGALVKNGTWESEDPRRLPAGRKAIRTKWTFKRK-LKGDGSVARNKVRLVAQGFSLVEDEDFFETSAPVARMTTLRTVFSLAAEHDFELEGMDIDAAYLNASVEEELFVKLPSEFF-PFYRDIPF-VRRLRKSLDRKWN-NTLDDFLVGIGLDLRRDRSNGTITISQGSYIREVLKRCGFDECRGVPTRVEGKVKTSAPHSRRRSGNSTEIRGM--------VGSLMYASTGTRPVIAYAVHQAARRMEDPCREDFSTYKRIFRYLSTVPDRSIMFGGRGSGHGLEGFVGADWAEDVEDRKSTTGYIFKLNGGTISWCSRKQQLVSWSSTEAEYVAAGEEGKETVYLRELLGSIDFGCKGSTTLF*DNKSAINLSKGSRAHYRTKHIGVRWYRIRESIRKGVLALKYVQTSDQLADILTKALS 1287
            E ++  E +KW  A+ EE  +L KN TWE  +   LP G+K I  KW FK+K    +    R K RLVA+G+S     D+ E  +PV R T++R V +L A+ D ELE +D+  A+L+ ++EEE+F+  P  F  P   ++   +++L+  L +++    L      +G+++ RDR    + +SQ +YI++VL++    + + V T +    + S     +   N  EI  M        VG LMYA   TRP +A+AV   +R M +P RE ++  K IFRYL    +  I+F  +   + + G+V AD+A +V+DR+STTGY+F L+ G I W S  Q +V+ S+TEAEY+A  E  KE ++L+ L+  +    +G   +  D++SAI L+K    H RTKHI VR+++IRE I  G + L+ V TS+  AD+LTK ++
Sbjct:  291 EAIESSEKDKWMEAMVEENESLSKNKTWELTE---LPKGKKPIGCKWVFKKKEAVSEKEGERFKARLVAKGYSQRHGIDYDEVFSPVVRHTSIRAVLALVADQDLELEQLDVKTAFLHGNLEEEIFMVQPEGFKQPGTENLVCRLKKLKSLLYKEFEMKDLGAAKKILGMEIHRDRDARKLWLSQKNYIKKVLEKFSMLDAKPVSTSLANHFRLSGSQCPK---NEEEIENMSKVPYASAVGCLMYAMVCTRPDLAHAVSTVSRYMANPGREHWNAVKWIFRYLKGTAEHGILFSRQPGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSEGPICWKSTLQSIVAMSTTEAEYMAVAEAAKEALWLKGLVKELGLN-QGGVQMHCDSQSAIYLAKNQVYHARTKHIDVRFHKIRELIVTGDIVLEKVHTSENAADMLTKPVT 724          
BLAST of mRNA_H-paniculata_contig20370.5276.1 vs. uniprot
Match: A0A2N9GFK1_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GFK1_FAGSY)

HSP 1 Score: 265 bits (678), Expect = 2.490e-75
Identity = 170/455 (37.36%), Postives = 258/455 (56.70%), Query Frame = 1
Query:    1 EGLKGPEAEKWRAAIEEEWGALVKNGTWESEDPRRLPAGRKAIRTKWTFKRK-LKGDGSVARNKVRLVAQGFSLVEDEDFFETSAPVARMTTLRTVFSLAAEHDFELEGMDIDAAYLNASVEEELFVKLPSEFF-PFYRDIPFVRRLRKSL------DRKWNNTL-------DDFLVG---IGLDLRRDRSNGTITISQGSYIREVLKRCGFDECRGVPTRVEGKVKTSAPHSRRRSGNSTEIRGM--------VGSLMYASTGTRPVIAYAVHQAARRMEDPCREDFSTYKRIFRYLSTVPDRSIMFGGRGSGHGLEGFVGADWAEDVEDRKSTTGYIFKLNGGTISWCSRKQQLVSWSSTEAEYVAAGEEGKETVYLRELLGSIDFGCKGSTTLF*DNKSAINLSKGSRAHYRTKHIGVRWYRIRESIRKGVLALKYVQTSDQLADILTKALS 1287
            E ++  E +KW  A+ EE  +L KN TWE  +   LP G+K I  KW FK+K    +    R K RLVA+G+S     D+ E  +PV R T++R V +L A+ D ELE +D+  A+L+ ++EEE+F+  P  F  P   ++  V RL+KSL       R+W  +L        D  V    +G+++RRDR    + +SQ +YIR+VLK+    + + V T +    + S     +   N  EI  M        VG LMYA   TRP +A+A+   +R M +P RE ++  K IFRYL    +  I+F  +   + + G+V AD+A +V+DR+STTGY+F L+GG I W S  Q +V+ S+TEAEY+A  E  KE ++L+ L+  +    +G   +  D++S I L++    H +TKHI VR+++IRE I  G + L+ V TS+  AD+LTK ++
Sbjct:  710 EAIESSEKDKWMEAMVEENESLSKNKTWELTE---LPKGKKPIGCKWVFKKKEAVSEKEGERFKARLVAKGYSQRHGIDYDEVFSPVVRHTSIRAVLALVADQDLELEQLDVKTAFLHGNLEEEIFMVQPEGFKQPGTENL--VCRLKKSLYGLKQSPRQWLKSLLHKEFEMKDLGVAKKILGMEIRRDRKARKLWLSQKNYIRKVLKKFSMLDAKPVSTPLANHFRLSGSQCPK---NEEEIENMSKVPYASAVGCLMYAMVCTRPDLAHAMSTVSRYMANPGREHWNAVKWIFRYLKGTAEHGILFSRQSGTNSVVGYVDADYACEVDDRRSTTGYVFTLSGGPICWKSTLQSIVAMSTTEAEYMAVAEAAKEVLWLKGLVKELSLN-QGGVQMHCDSQSVIYLAENQVYHAKTKHIDVRFHKIRELIVTGDIVLEKVHTSENAADMLTKPVT 1155          
BLAST of mRNA_H-paniculata_contig20370.5276.1 vs. uniprot
Match: A0A2N9GMG5_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GMG5_FAGSY)

HSP 1 Score: 265 bits (676), Expect = 4.640e-75
Identity = 170/458 (37.12%), Postives = 258/458 (56.33%), Query Frame = 1
Query:    1 EGLKGPEAEKWRAAIEEEWGALVKNGTWESEDPRRLPAGRKAIRTKWTFKRK-LKGDGSVARNKVRLVAQGFSLVEDEDFFETSAPVARMTTLRTVFSLAAEHDFELEGMDIDAAYLNASVEEELFVKLPSEFF-PFYRDIPFVRRLRKSL------DRKWNNTLDDFLVGIG-----------LDLRRDRSNGT--ITISQGSYIREVLKRCGFDECRGVPTRVEGKVKTSAPHSRRRSGNSTEIRGM--------VGSLMYASTGTRPVIAYAVHQAARRMEDPCREDFSTYKRIFRYLSTVPDRSIMFGGRGSGHGLEGFVGADWAEDVEDRKSTTGYIFKLNGGTISWCSRKQQLVSWSSTEAEYVAAGEEGKETVYLRELLGSIDFGCKGSTTLF*DNKSAINLSKGSRAHYRTKHIGVRWYRIRESIRKGVLALKYVQTSDQLADILTKALS 1287
            E ++  E +KW  A+ EE  +L KN TWE  +   LP G+K I  KW FK+K    +    R K RLVA+G+S     D+ E  +PV R T++R V +L A+ D ELE +D+  A+L+ ++EEE+F++ P  F  P   ++  V RL+KSL       R+W    D +++ IG           + +  D +  T  + +SQ +YIR+VL++    + + V T +    + S     +   N  EI  M        VG LMYA   TRP +A+AV   +R M +P RE ++  K IFRYL    +  I+F  +   + + G+V AD+A +V+DR+STTGY+F L+GG I W S  Q +V+ S+TEAEY+A  E  KE ++L+ L+  +    +G   +  D++SAI L+K    H RTKHI VR+++IRE I  G + L+ V TS+  AD+LTK ++
Sbjct:  705 EAIESSEKDKWMEAMVEENESLSKNKTWELTE---LPKGKKPIGCKWVFKKKEAVSEKEGERFKARLVAKGYSQRHGIDYDEVFSPVVRHTSIRAVLALVADQDLELEQLDVKTAFLHGNLEEEIFMEQPEGFKQPGTENL--VCRLKKSLYGLKQSPRQWYKRFDSYMIQIGYTRCEYDCCVYVRILEDGTERTRKLWLSQKNYIRKVLEKFSMLDAKPVSTPLANHFRLSGSQCPK---NEEEIENMSKVPYASAVGCLMYAMVCTRPDLAHAVSTVSRYMANPGREHWNAVKWIFRYLKGTAEHGILFSRQPGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSGGPICWKSTLQSIVAMSTTEAEYMAVAEAAKEALWLKGLVKELGLN-QGGVQMHCDSQSAIYLAKNQVYHARTKHIDVRFHKIRELIVTGDIVLEKVHTSENAADMLTKPVT 1153          
BLAST of mRNA_H-paniculata_contig20370.5276.1 vs. uniprot
Match: A0A2N9EIR8_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9EIR8_FAGSY)

HSP 1 Score: 263 bits (673), Expect = 1.140e-74
Identity = 168/456 (36.84%), Postives = 254/456 (55.70%), Query Frame = 1
Query:    1 EGLKGPEAEKWRAAIEEEWGALVKNGTWESEDPRRLPAGRKAIRTKWTFKRK-LKGDGSVARNKVRLVAQGFSLVEDEDFFETSAPVARMTTLRTVFSLAAEHDFELEGMDIDAAYLNASVEEELFVKLPSEF---------FPFYRDIPF--------VRRLRKSLDRKWN-NTLDDFLVGIGLDLRRDRSNGTITISQGSYIREVLKRCGFDECRGVPTRVEGKVKTSAPHSRRRSGNSTEIRGM--------VGSLMYASTGTRPVIAYAVHQAARRMEDPCREDFSTYKRIFRYLSTVPDRSIMFGGRGSGHGLEGFVGADWAEDVEDRKSTTGYIFKLNGGTISWCSRKQQLVSWSSTEAEYVAAGEEGKETVYLRELLGSIDFGCKGSTTLF*DNKSAINLSKGSRAHYRTKHIGVRWYRIRESIRKGVLALKYVQTSDQLADILTKALS 1287
            E ++  E +KW  A+ EE  +L KN TWE  +   LP G+K I  KW FK+K    +    R K RLVA+G+S     D+ E  +PV R T++R V +L A  D ELE +D+  A+L+ ++EEE+F++ P  F            Y D           V RL+  L +++    L      +G+++RRDR    + +SQ +YIR+VL++    + + V T +    + S+    +   N  EI  M        VG LMYA   TRP +A+AV   +R M +P RE ++  K IFRYL    +  I+F  +   + + G+V AD+A +V+DR+STTGY+F L+GG I W S  Q +V+ S+TEAEY+A  E  KE ++L+ L+  +    +G   +  D++SAI L+K    H RTKHI VR+++IRE I  G + L+ V TS+  AD+LTK ++
Sbjct:  697 EAIESSEKDKWMEAMVEENESLSKNKTWELTE---LPKGKKPIGCKWVFKKKEAVSEKEGERFKARLVAKGYSQRHGIDYDEVFSPVVRHTSIRAVLTLVANQDLELEQLDVKTAFLHGNLEEEIFMEQPEGFKQPDGSYIFLLLYVDDMLIAAKSMCEVNRLKSLLHKEFEMKDLGAAKKILGMEIRRDREARKLWLSQKNYIRKVLEKFSMLDAKPVSTPLANHFRLSSSQCPK---NEEEIENMSKVPYASAVGCLMYAMVCTRPDLAHAVSTVSRYMANPRREHWNAVKWIFRYLKGTAEHGILFSRQPGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSGGPICWKSTLQSIVAMSTTEAEYMAIAEAAKEALWLKGLVKELGLN-QGGVQMHCDSQSAIYLAKNQVYHARTKHIDVRFHKIRELIVTGDIVLEKVHTSENAADMLTKPVT 1145          
BLAST of mRNA_H-paniculata_contig20370.5276.1 vs. uniprot
Match: A0A8H7NTQ9_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Postia placenta TaxID=104341 RepID=A0A8H7NTQ9_9APHY)

HSP 1 Score: 262 bits (669), Expect = 3.350e-74
Identity = 164/497 (33.00%), Postives = 248/497 (49.90%), Query Frame = 1
Query:    1 EGLKGPEAEKWRAAIEEEWGALVKNGTWESEDPRRLPAGRKAIRTKWTFKRKLKGDGSVARNKVRLVAQGFSLVEDEDFFETSAPVARMTTLRTVFSLAAEHDFELEGMDIDAAYLNASVEEELFVKLP--------------------------------------------SEFFPFYR---------------------DIPFVRRLRKSLDRKWNNT-LDDFLVGIGLDLRRDRSNGTITISQGSYIREVLKRCGFDECRGVPTRVEGKVK-TSAPHSRRRSGNSTEIRGMVGSLMYASTGTRPVIAYAVHQAARRMEDPCREDFSTYKRIFRYLSTVPDRSIMFGGRGSGHGLEGFVGADWAEDVEDRKSTTGYIFKLNGGTISWCSRKQQLVSWSSTEAEYVAAGEEGKETVYLRELLGSIDFGCKGSTTLF*DNKSAINLSKGSRAHYRTKHIGVRWYRIRESIRKGVLALKYVQTSDQLADILTKALSK 1290
            E +  P+   W+AA+ EE  A  K   ++  +    P  RK +  KW FK K   DG + + K RLVA+GF+ VE  DF ET APVA+  ++RT+ +LAA+ D E+  MD+ +A+LN  +EEE+++  P                                            S+   FY+                     DI  V  L+ +L  ++  T L +    + +++ RDR    + +SQ  Y+ + L+R G  +CR V T +    K    P +     +    +  +GSLMYA   TRP +A+AV   ++    P +E +    R++RYL    DR +++ G      L G+V ADWA D+ DR+S TG++F ++G  ++W S+KQ   + SSTEAEY+A     KE ++LR  L  I     GST L  DN+SAI L+K    H RTKHI VR++ IRE    G +  +YV T +Q+AD+LTK L++
Sbjct:  629 EAMARPDTVHWKAAMAEELHAFAKAELYDEVE---RPRDRKVVDCKWVFKIKRGPDGEIKKYKARLVAKGFTQVEGIDFTETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLEEEIYMNAPPGFRLNANIIWRLRKALYGLKQASREWYKRIRAEFERLGFTMCESDHSVFYKVDNGTLVIIAIYVDDMLILSDDIDAVNTLKANLKSRFEMTDLGEARWILSMEILRDRPRRLLELSQHQYVEKALERHGMADCRPVSTPMAQNQKHLKLPQAEI---DPKPYQSALGSLMYAMLRTRPDLAFAVGALSQHAATPGKEHWHALMRVYRYLRGTSDRRLVYNGTAKEKHLLGYVDADWAADINDRRSVTGFVFLISGAAVTWSSKKQSSTAQSSTEAEYMAGAHGTKEAIWLRAFLSEIGQAISGSTPLLIDNQSAIALAKNPEFHNRTKHIAVRYHFIREKYDSGDITPEYVPTGNQVADVLTKGLAR 1119          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20370.5276.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0J7KHD5_LASNI1.650e-8336.98Retrotransposon ty1-copia subclass n=1 Tax=Lasius ... [more]
X1WUQ9_ACYPI5.000e-8034.58Integrase catalytic domain-containing protein n=1 ... [more]
A0A176WHF9_MARPO1.550e-7737.26Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0C9VSW1_SPHS46.080e-7633.54Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2N9ER08_FAGSY7.250e-7637.55Integrase catalytic domain-containing protein n=1 ... [more]
A0A2N9GEP0_FAGSY2.420e-7536.73Integrase catalytic domain-containing protein n=2 ... [more]
A0A2N9GFK1_FAGSY2.490e-7537.36Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A2N9GMG5_FAGSY4.640e-7537.12Integrase catalytic domain-containing protein n=1 ... [more]
A0A2N9EIR8_FAGSY1.140e-7436.84Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A8H7NTQ9_9APHY3.350e-7433.00Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20370contigH-paniculata_contig20370:5..1639 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score157.5
Seed ortholog evalue9e-36
Seed eggNOG ortholog7029.ACYPI067527-PA
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs38VJ1@33154,3CB3U@33208,3DT1J@33213,3EE1Z@33342,3SW1M@50557,4294G@6656,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelParaneoptera
Best eggNOG OGNA|NA|NA
Exons4
Model size1350
Cds size852
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20370.5276.1prot_H-paniculata_contig20370.5276.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig20370 269..1405 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929529.2730083-UTR-H-paniculata_contig20370:4..2681622929529.2730083-UTR-H-paniculata_contig20370:4..268Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig20370 5..268 +
1691480900.1818213-UTR-H-paniculata_contig20370:4..2681691480900.1818213-UTR-H-paniculata_contig20370:4..268Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig20370 5..268 +
1622929529.3676095-UTR-H-paniculata_contig20370:1405..16391622929529.3676095-UTR-H-paniculata_contig20370:1405..1639Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig20370 1406..1639 +
1691480900.2264047-UTR-H-paniculata_contig20370:1405..16391691480900.2264047-UTR-H-paniculata_contig20370:1405..1639Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig20370 1406..1639 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929529.287521-CDS-H-paniculata_contig20370:268..4501622929529.287521-CDS-H-paniculata_contig20370:268..450Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20370 269..450 +
1691480900.1918876-CDS-H-paniculata_contig20370:268..4501691480900.1918876-CDS-H-paniculata_contig20370:268..450Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20370 269..450 +
1622929529.307388-CDS-H-paniculata_contig20370:467..5231622929529.307388-CDS-H-paniculata_contig20370:467..523Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20370 468..523 +
1691480900.2001145-CDS-H-paniculata_contig20370:467..5231691480900.2001145-CDS-H-paniculata_contig20370:467..523Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20370 468..523 +
1622929529.325788-CDS-H-paniculata_contig20370:716..8551622929529.325788-CDS-H-paniculata_contig20370:716..855Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20370 717..855 +
1691480900.208095-CDS-H-paniculata_contig20370:716..8551691480900.208095-CDS-H-paniculata_contig20370:716..855Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20370 717..855 +
1622929529.3493028-CDS-H-paniculata_contig20370:930..14051622929529.3493028-CDS-H-paniculata_contig20370:930..1405Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20370 931..1405 +
1691480900.2187514-CDS-H-paniculata_contig20370:930..14051691480900.2187514-CDS-H-paniculata_contig20370:930..1405Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20370 931..1405 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig20370.5276.1

>prot_H-paniculata_contig20370.5276.1 ID=prot_H-paniculata_contig20370.5276.1|Name=mRNA_H-paniculata_contig20370.5276.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=284bp
MTTLRTVFSLAAEHDFELEGMDIDAAYLNASVEEELFVKLPSEFFPFYRD
IPFVRRLRKSLDRKWNNTLDDFLVGIGLDLRRDRSNGTITISQGSYIREV
LKRCGFDECRGVPTRVEGKVKTSAPHSRRRSGNSTEIRGMVGSLMYASTG
TRPVIAYAVHQAARRMEDPCREDFSTYKRIFRYLSTVPDRSIMFGGRGSG
HGLEGFVGADWAEDVEDRKSTTGYIFKLNGGTISWCSRKQQLVSWSSTEA
EYVAAGEEGKETVYLRELLGSIDFGCKGSTTLF*
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mRNA from alignment at H-paniculata_contig20370:5..1639+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig20370.5276.1 ID=mRNA_H-paniculata_contig20370.5276.1|Name=mRNA_H-paniculata_contig20370.5276.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1635bp|location=Sequence derived from alignment at H-paniculata_contig20370:5..1639+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAGGGATTGAAGGGGCCAGAGGCGGAAAAATGGCGTGCGGCAATAGAGGA AGAATGGGGGGCGTTGGTGAAAAATGGGACATGGGAAAGCGAAGACCCGA GGAGGTTACCGGCAGGACGGAAGGCGATTCGTACGAAATGGACCTTCAAG CGGAAACTGAAGGGGGATGGCAGCGTGGCGCGCAACAAAGTGCGACTGGT GGCTCAAGGTTTTTCACTGGTGGAGGATGAAGATTTCTTTGAAACCAGTG CTCCCGTAGCTCGCATGACGACGTTACGTACTGTTTTTAGCCTGGCCGCC GAACATGATTTTGAATTAGAAGGCATGGACATAGATGCGGCGTATTTGAA CGCCTCGGTAGAAGAAGAGCTGTTTGTTAAGCTACCCTCCGAGTTTTTCC CTTTCTACCGAGACATACCGTTTGTGCGCCGCCTGCGTAAAAGCCTGTAC GACCTCAGCAGAGCGACCGGAAGTGGAACAACACGCTTGACGATTTTCTT GTTGGGATAGGACTCGACCGTTCCACTACCGTCTTATGCTTGTACTTTTC TCGTGACGATGGGGGAGAGATAAACGTTCTGGTGGCTGTGTATGTTGACG ACCTGGTCATTGCTGGCCGTCGTGAGAAAGTAGACGACTTCAAGCATAAC ATCAGTCAGCGTTTTAGGATGAAAGGCTTGGCTCTCTCTCTCGCGCGTGT TGGAAATAGAAGTACGACGTGACCGCTCTAATGGTACCATAACCATCTCG CAGGGTAGCTACATTCGCGAGGTACTGAAAAGATGCGGTTTTGACGAGTG TCGGGGAGTACCCACCCGTGTAGAGGGAAAAGTGAAGACTTCGGCACCCC AGTCGGCCGACAAGCCCTCCGAACTGAAGTCACTTGGGGCTATAATGTCG GACTTAGGTGCAGGAGTACAAGAAAGCAGCAGAAGAAGAAGTGGCAATTC AACTGAAATCAGAGGCATGGTAGGATCACTCATGTACGCCTCGACAGGAA CTAGACCTGTTATAGCATACGCGGTACACCAAGCAGCACGTCGTATGGAG GACCCATGTCGGGAAGACTTCAGTACATACAAGCGCATTTTCCGTTATCT CAGTACTGTGCCTGACCGCAGCATTATGTTCGGCGGTAGGGGTAGTGGTC ACGGCCTGGAAGGATTCGTCGGTGCCGATTGGGCGGAAGATGTCGAGGAC CGAAAGTCCACAACAGGATACATTTTCAAACTAAACGGTGGTACGATAAG TTGGTGCTCTAGGAAGCAACAGTTAGTCTCGTGGTCCAGTACAGAGGCAG AGTACGTTGCTGCAGGAGAAGAGGGGAAGGAGACGGTATATCTTAGGGAG TTACTAGGATCGATAGATTTCGGATGCAAAGGGAGCACGACATTGTTTTA GGACAATAAATCAGCTATTAATCTGAGTAAGGGATCTCGCGCACACTACA GGACAAAGCACATCGGAGTGCGCTGGTACCGAATTCGAGAGTCGATTCGG AAAGGAGTATTGGCGTTGAAATACGTGCAGACCAGCGATCAACTTGCTGA CATTTTAACGAAAGCACTAAGCAAAGGATTCACATGTCGTGCGATATCAA AATGTCAGTTTTCGATTTTGGCAATTGATTGGATA
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Coding sequence (CDS) from alignment at H-paniculata_contig20370:5..1639+

>mRNA_H-paniculata_contig20370.5276.1 ID=mRNA_H-paniculata_contig20370.5276.1|Name=mRNA_H-paniculata_contig20370.5276.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1704bp|location=Sequence derived from alignment at H-paniculata_contig20370:5..1639+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACGACGTTACGTACTGTTTTTAGCCTGGCCGCCGAACATGATTTTGA
ATTAGAAGGCATGGACATAGATGCGGCGTATTTGAACGCCTCGGTAGAAG
AAGAGCTGTTTGTTAAGCTACCCTCCGAGTTTTTCCCTTTCTACCGAGAC
ATACCGTTTGTGCGCCGCCTGCGTAAAAGCCTATGACGACGTTACGTACT
GTTTTTAGCCTGGCCGCCGAACATGATTTTGAATTAGAAGGCATGGACAT
AGATGCGGCGTATTTGAACGCCTCGGTAGAAGAAGAGCTGTTTGTTAAGC
TACCCTCCGAGTTTTTCCCTTTCTACCGAGACATACCGTTTGTGCGCCGC
CTGCGTAAAAGCCTCGACCGGAAGTGGAACAACACGCTTGACGATTTTCT
TGTTGGGATAGGACTCGACCCGACCGGAAGTGGAACAACACGCTTGACGA
TTTTCTTGTTGGGATAGGACTCGACCTACGACGTGACCGCTCTAATGGTA
CCATAACCATCTCGCAGGGTAGCTACATTCGCGAGGTACTGAAAAGATGC
GGTTTTGACGAGTGTCGGGGAGTACCCACCCGTGTAGAGGGAAAAGTGAA
GACTTCGGCACCCCATACGACGTGACCGCTCTAATGGTACCATAACCATC
TCGCAGGGTAGCTACATTCGCGAGGTACTGAAAAGATGCGGTTTTGACGA
GTGTCGGGGAGTACCCACCCGTGTAGAGGGAAAAGTGAAGACTTCGGCAC
CCCACAGCAGAAGAAGAAGTGGCAATTCAACTGAAATCAGAGGCATGGTA
GGATCACTCATGTACGCCTCGACAGGAACTAGACCTGTTATAGCATACGC
GGTACACCAAGCAGCACGTCGTATGGAGGACCCATGTCGGGAAGACTTCA
GTACATACAAGCGCATTTTCCGTTATCTCAGTACTGTGCCTGACCGCAGC
ATTATGTTCGGCGGTAGGGGTAGTGGTCACGGCCTGGAAGGATTCGTCGG
TGCCGATTGGGCGGAAGATGTCGAGGACCGAAAGTCCACAACAGGATACA
TTTTCAAACTAAACGGTGGTACGATAAGTTGGTGCTCTAGGAAGCAACAG
TTAGTCTCGTGGTCCAGTACAGAGGCAGAGTACGTTGCTGCAGGAGAAGA
GGGGAAGGAGACGGTATATCTTAGGGAGTTACTAGGATCGATAGATTTCG
GATGCAAAGGGAGCACGACATTGTTTTAGCAGCAGAAGAAGAAGTGGCAA
TTCAACTGAAATCAGAGGCATGGTAGGATCACTCATGTACGCCTCGACAG
GAACTAGACCTGTTATAGCATACGCGGTACACCAAGCAGCACGTCGTATG
GAGGACCCATGTCGGGAAGACTTCAGTACATACAAGCGCATTTTCCGTTA
TCTCAGTACTGTGCCTGACCGCAGCATTATGTTCGGCGGTAGGGGTAGTG
GTCACGGCCTGGAAGGATTCGTCGGTGCCGATTGGGCGGAAGATGTCGAG
GACCGAAAGTCCACAACAGGATACATTTTCAAACTAAACGGTGGTACGAT
AAGTTGGTGCTCTAGGAAGCAACAGTTAGTCTCGTGGTCCAGTACAGAGG
CAGAGTACGTTGCTGCAGGAGAAGAGGGGAAGGAGACGGTATATCTTAGG
GAGTTACTAGGATCGATAGATTTCGGATGCAAAGGGAGCACGACATTGTT
TTAG
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