prot_H-paniculata_contig20324.5262.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig20324.5262.1
Unique Nameprot_H-paniculata_contig20324.5262.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length98
Homology
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BLAST of mRNA_H-paniculata_contig20324.5262.1 vs. uniprot
Match: D7FXA3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA3_ECTSI)

HSP 1 Score: 137 bits (345), Expect = 1.540e-38
Identity = 65/90 (72.22%), Postives = 74/90 (82.22%), Query Frame = 0 
Query:    1 LRSKYPSPVHFFKHKCVYTFHHPFEASTITMEMFYRDMRATVISDALGGKSHQMRFKIDHPLCHYVRDYSHDDPSHFVMIEFSSSVDAQR 90
            LR KYPSPV FF HKCVYTFHHPFEA+ ITMEMF+RDMR    S AL     ++RFKIDHPLCHY +DYSHDDPSHFV+I+FSS +DA+R
Sbjct:  142 LRCKYPSPVAFFNHKCVYTFHHPFEATRITMEMFFRDMR----SAALDSPRRELRFKIDHPLCHYTKDYSHDDPSHFVVIQFSSGLDAER 227
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BLAST of mRNA_H-paniculata_contig20324.5262.1 vs. uniprot
Match: A0A6H5K4P7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4P7_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 4.210e-19
Identity = 38/60 (63.33%), Postives = 48/60 (80.00%), Query Frame = 0 
Query:   31 MEMFYRDMRATVISDALGGKSHQMRFKIDHPLCHYVRDYSHDDPSHFVMIEFSSSVDAQR 90
            MEMF+RDMR+ V    L  +  ++RFKIDHPLCHY +DYSH+DPSHFV+I+FSS +DA R
Sbjct:    1 MEMFFRDMRSAV----LDHRRRELRFKIDHPLCHYTKDYSHNDPSHFVVIQFSSGLDADR 56
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20324.5262.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FXA3_ECTSI1.540e-3872.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K4P7_9PHAE4.210e-1963.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20324contigH-paniculata_contig20324:135..2935 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20324.5262.1mRNA_H-paniculata_contig20324.5262.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig20324 135..2935 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig20324.5262.1 ID=prot_H-paniculata_contig20324.5262.1|Name=mRNA_H-paniculata_contig20324.5262.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=98bp
LRSKYPSPVHFFKHKCVYTFHHPFEASTITMEMFYRDMRATVISDALGGK
SHQMRFKIDHPLCHYVRDYSHDDPSHFVMIEFSSSVDAQRADREVPAL
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