prot_H-paniculata_contig2032.5260.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2032.5260.1
Unique Nameprot_H-paniculata_contig2032.5260.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length213
Homology
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BLAST of mRNA_H-paniculata_contig2032.5260.1 vs. uniprot
Match: D8LGY2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGY2_ECTSI)

HSP 1 Score: 55.8 bits (133), Expect = 7.150e-6
Identity = 27/46 (58.70%), Postives = 35/46 (76.09%), Query Frame = 0 
Query:  107 EARLRVDQEARALEIANMQAKRRDSEGLFMRPHPGNSLEPAAAAGL 152
            +A+ RV+++ RA+E A + AKRRD+EGL MRPHPGN LEP  A  L
Sbjct:  135 QAKSRVEEDLRAIETARINAKRRDAEGLDMRPHPGNRLEPEDATPL 180
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2032.5260.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LGY2_ECTSI7.150e-658.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2032contigH-paniculata_contig2032:3405..10311 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2032.5260.1mRNA_H-paniculata_contig2032.5260.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2032 3257..10311 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2032.5260.1 ID=prot_H-paniculata_contig2032.5260.1|Name=mRNA_H-paniculata_contig2032.5260.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=213bp
MATYARDPELQAEQSAQQNLRHPVVSSTAGALPYSPSAVVIAAEEEASAV
VTGIPTAYAYVGIPVEAEYVPLLDGTSSSAGHESSAQTNEGVSHQCRKSE
TERAKIEARLRVDQEARALEIANMQAKRRDSEGLFMRPHPGNSLEPAAAA
GLARAGGKLDFYREEKDFWGNQACPTRAAPRGEKDAHHDCAEKERGNDGG
GPGGGRESTASGE
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