prot_H-paniculata_contig20304.5254.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig20304.5254.1
Unique Nameprot_H-paniculata_contig20304.5254.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length86
Homology
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BLAST of mRNA_H-paniculata_contig20304.5254.1 vs. uniprot
Match: A0A6H5K769_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K769_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 6.900e-18
Identity = 45/81 (55.56%), Postives = 58/81 (71.60%), Query Frame = 0 
Query:    4 NDEVSKNLHRNMVASMCTEKILTGQRVRRFSRRTRYYCQAYFELQKGG-DIESKDMIEKTKKKCNAHRNIVNMKPGFINKQ 83
            NDEV K+LH N+  SMC EK LT  RVRRF+RRTR YC+AY E+Q G  D +   ++EK +    AHRNI++M+PGF+ KQ
Sbjct:  304 NDEVPKHLHANIEKSMCREKHLTIGRVRRFARRTRDYCRAYREIQLGAADGQGLQLVEKMRNTQKAHRNILDMEPGFLGKQ 384
[Close]
BLAST of mRNA_H-paniculata_contig20304.5254.1 vs. uniprot
Match: A0A6H5JMT5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMT5_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 3.440e-16
Identity = 44/81 (54.32%), Postives = 56/81 (69.14%), Query Frame = 0 
Query:    4 NDEVSKNLHRNMVASMCTEKILTGQRVRRFSRRTRYYCQAYFELQKGG-DIESKDMIEKTKKKCNAHRNIVNMKPGFINKQ 83
            NDEV K+LH N+  SMC EK LT  RVRRF+RR R YC+AY E Q G  D +   ++EK +    AHRNI++M+PGF+ KQ
Sbjct:  664 NDEVPKHLHANIEKSMCREKHLTIGRVRRFARRKRDYCRAYREKQLGAVDGQGLQLVEKMRDTQKAHRNILDMEPGFLGKQ 744
[Close]
BLAST of mRNA_H-paniculata_contig20304.5254.1 vs. uniprot
Match: A0A6H5JVN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN6_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 7.850e-15
Identity = 44/81 (54.32%), Postives = 57/81 (70.37%), Query Frame = 0 
Query:    4 NDEVSKNLHRNMVASMCTEKILTGQRVRRFSRRTRYYCQAYFELQKGG-DIESKDMIEKTKKKCNAHRNIVNMKPGFINKQ 83
            NDEV K+LH N+  SM  EK LT  RVRRF+RRTR YC+AY E+Q G  D +   ++EK +    AHRNI++M+PGF+ KQ
Sbjct:  900 NDEVPKHLHANIEKSM--EKHLTIGRVRRFARRTRDYCRAYREIQLGAADGQGLQLVEKMRNTQKAHRNILDMEPGFLGKQ 978
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20304.5254.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K769_9PHAE6.900e-1855.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMT5_9PHAE3.440e-1654.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVN6_9PHAE7.850e-1554.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20304contigH-paniculata_contig20304:996..1253 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20304.5254.1mRNA_H-paniculata_contig20304.5254.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig20304 823..2452 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig20304.5254.1 ID=prot_H-paniculata_contig20304.5254.1|Name=mRNA_H-paniculata_contig20304.5254.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=86bp
MLLNDEVSKNLHRNMVASMCTEKILTGQRVRRFSRRTRYYCQAYFELQKG
GDIESKDMIEKTKKKCNAHRNIVNMKPGFINKQYE*
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