prot_H-paniculata_contig2030.5252.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2030.5252.1
Unique Nameprot_H-paniculata_contig2030.5252.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length860
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2030.5252.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006553Leucine-rich repeat, cysteine-containing subtypeSMARTSM00367LRR_CC_2coord: 605..629
e-value: 88.0
score: 7.2
coord: 554..579
e-value: 12.0
score: 14.0
coord: 431..462
e-value: 43.0
score: 9.6
coord: 792..817
e-value: 8.1
score: 15.2
coord: 737..762
e-value: 24.0
score: 11.6
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 395..666
e-value: 8.7E-28
score: 98.9
coord: 4..147
e-value: 1.4E-6
score: 28.9
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 704..858
e-value: 1.8E-10
score: 42.3
NoneNo IPR availablePANTHERPTHR13382MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR Bcoord: 739..835
coord: 478..630
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..860
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.618
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 406..621
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 732..850

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2030contigH-paniculata_contig2030:6655..20450 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2030.5252.1mRNA_H-paniculata_contig2030.5252.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2030 6655..21811 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2030.5252.1 ID=prot_H-paniculata_contig2030.5252.1|Name=mRNA_H-paniculata_contig2030.5252.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=860bp
MCFTILSTDLLASSLSFLAVVDVCRVGRASCHARDAATHALNTCTSLVLV
EEPPFVNDSGLVHLLLRCTALTKIDIDARRLTDAGAAAVADALPRLRSVA
LHHGYGLSGIGCLTSRPRSRTNDDDEEDDNNNDENETGHNRASLMGVVTQ
NPPGRPSTVTLATPLPLPPPPPPPLIMKPVPYIALRSLTLCSLGPSYDFL
SYSYSSTWSRLARQWIGIPTMRSLTLINNVGDMNFLPLLEIAPFFPKPTP
RADGGSGARRSATFSSDDHRDPGRAPTRSRAPALPETQGVTTAVNAPAKK
NDGVRAVRRGERRAGMRVDGGNLARVLREGHRKKTRMEEGLEKGKKDKRG
SGGGNDDDNDDGTVGLLELSLAAVTWKDVVEALDVQPRFRVIRHRVMQGP
SLRPLWVRLRRLSLVLDEVTDELCAAVAGGCPELHELSLRQIHHSQSLRQ
LSDTGLVSLARCQHLHSLNLKSAGQFQGCSDIGLVYMAMELCNLQGLSLC
VFPRASNTTVAAILDHTRHQLRHLRLEGCEGLDGQVFIQPSFATHQSSRR
LAMVSALTSISLARCRGVTPDSLAALVSACGPCLKLLDLSSCLVTDEVLE
LILGLPGLQDLTLNRCPFTNEGLIAACRRELHPHYHDHHCHQQQQQQQQH
GPDPGEVYNDYPQNRSLSPLQFEHFSGRNNPQHYTATTSALNSPAESVLP
LPISATSAYCRNSPRDNDTRDILFSSLPPPPPLLPPPQLLRRLSVAGCEE
VEGSGVIELLRSARLGRHTLALGAMGIRGIYDGHVEELVAGLPCLQDLKL
SNSPHLTNAAVASIVSSECGRNTLRVLELGRCPGIGGSALALVMPPALPA
LVRFGWWGAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006553Leu-rich_rpt_Cys-con_subtyp
IPR032675LRR_dom_sf