mRNA_H-paniculata_contig10812.525.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig10812.525.1
Unique Name	mRNA_H-paniculata_contig10812.525.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig10812.525.1 vs. uniprot
Match: D7G7Z3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Z3_ECTSI)

HSP 1 Score: 387 bits (993), Expect = 1.710e-128
Identity = 209/392 (53.32%), Postives = 262/392 (66.84%), Query Frame = 1

Query:    1 MGRIVVLVSACSVFLVAGWLLVITGGDRSNSNEKLAASVPAVRKVDLSVDKERQSAERLLPQQTDKKIKGINPAATGPVKGRKDDQDVGKRRPVKGGLKGMQKGVQPDRRNVIEDVSLEDFEAPEGKLWIPAAMVGPVNVDGSD-PLHDVTVAYCQLDMQAYHEAPWLFAMGVYHQRQSGCLDDKSLVRNYRLSSLAALVDANPGAFLTPSGFIYHETRCGSTLSANMMAAVPTNIVHRCSDELKVRVLRLVMTLMGPAQQGHANSFFKFQSSKFVTAMEIAWPDVPWIYLFRDPLEVMASNLKASWRKVAPRHDRNETITKPDGVYNLGGPCVRSVAKAGGNGRGRRSPPPGELVDGCAKQLESLNQMALNQIRGGSPNGVVVEYRQLPEV 1173
            M R+ VL+S CSVFLV  W +V     R  S  +  +S P V    L   K ++     + ++   K+K       G   G ++    GK +   G      +G+  DR+N++E V ++D  AP G+LWIPAA+ GP+N D  D  L +V VAYCQLDM AYHE+PWLFAMG +HQR SGC+DD SL R YRLSSL  +++ NP  F+ P+GFIYHETRCGSTLSANM+AAVP+NIVHRC D L+  ++R V  LMGP Q GH + FFKFQSSKF+ A+E AWP+  WIYLFRDPLEVM+SNLK +WRK     +RN  +T P  VYNLGGPCVR  AK GG+   R++P P  LV  CAK LE+LN++AL QI  GSPNG+ VEYRQLPEV
Sbjct:    1 MPRLAVLISGCSVFLVLSWAMVAI---RQASRPQFHSSSPTV----LPAAKAQKEGGVGVHKEDAAKLKTRFKTPDGKDLGDRELDRNGKPKKRMGS-----RGISVDRKNIVETVEMDDLRAPPGRLWIPAALSGPINHDSPDNALFNVLVAYCQLDMVAYHESPWLFAMGAFHQRTSGCMDDPSLTRTYRLSSLKRVLEENPDEFMDPTGFIYHETRCGSTLSANMIAAVPSNIVHRCPDGLREELVRTVFRLMGPVQDGHTDLFFKFQSSKFLPAIEQAWPETKWIYLFRDPLEVMSSNLKGAWRKQVASAERN--MTSP-AVYNLGGPCVRG-AKGGGS---RKAPSPESLVTTCAKHLETLNEIALTQIVEGSPNGLAVEYRQLPEV 373

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BLAST of mRNA_H-paniculata_contig10812.525.1 vs. uniprot
Match: A0A6H5K3E4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3E4_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 3.690e-42
Identity = 93/208 (44.71%), Postives = 125/208 (60.10%), Query Frame = 1

Query:  358 DFEAP-EGKLWIPAAMVGPVN----VDGSDPLHDVTVAYCQLDMQAYHEAPWLFAMGVYHQRQSGCLDDKSLVRNYRLSSLAALVDANPGAFLTPSGFIYHETRCGSTLSANMMAAVPTNIV-----------HRCSD--EL-KVRVLRLVMTLMGPAQQGHANSFFKFQSSKFVTAMEIAWPDVPWIYLFRDPLEVMASNLKASWRK 924
            D E P EG LW P  M  P+      D S    + T+ +C + M  Y E PW + M V  Q++S C   ++L R++RLS L   +  +P  FL P+GF+YHETR GSTL ANM+A VP+N+V            RCSD  E+ KV +LR +MTL+G  + GH + FFKFQ S  +  M  A+P+V W+YLFRDP+EVM SNLK ++ K
Sbjct:  142 DLEVPREGLLWQPTTM-SPLKCGEAADASADECEATITFCLMRMAEYQETPWKYPMAVMLQKKSECSKAENL-RSFRLSDLRTYMREHPEEFLQPNGFVYHETRTGSTLVANMLAHVPSNLVVSENNMAEDPVRRCSDCTEMQKVALLREIMTLLGNGRNGHEHLFFKFQDSTTLPLMMKAYPEVGWVYLFRDPVEVMVSNLKGAYGK 347

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BLAST of mRNA_H-paniculata_contig10812.525.1 vs. uniprot
Match: D7G7C8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7C8_ECTSI)

HSP 1 Score: 158 bits (399), Expect = 7.150e-40
Identity = 87/202 (43.07%), Postives = 118/202 (58.42%), Query Frame = 1

Query:  358 DFEAP-EGKLWIPAAMVGPVNVDGSDPLHD---VTVAYCQLDMQAYHEAPWLFAMGVYHQRQSGCLDDKSLVRNYRLSSLAALVDANPGAFLTPSGFIYHETRCGSTLSANMMAAVPTNIV--------------HRCSDELKVRVLRLVMTLMGPAQQGHANSFFKFQSSKFVTAMEIAWPDVPWIYLFRDPLEVMASNLK 909
            D E P EG LW P  M      + +D   D    T+ +C + M  Y E PW + M V  Q++SGC   ++L R++ LS L   +  +P  FL P+GF+YHETR GSTL ANM+A VP+N+V                C++  KV +LR +MTL+G  + GH + FFKFQ S  +  M  A+P+V W+YLFRDP+EVM SNLK
Sbjct:   18 DLEVPREGLLWQPTLMSPLKCGEAADLAADECEATITFCLMRMAEYQETPWKYPMAVMLQKKSGCSKAENL-RSFHLSDLRTYMREHPEEFLQPNGFVYHETRTGSTLVANMLAHVPSNLVVSESNMAEDPVRRCSHCTEMQKVTLLREIMTLLGNGRNGHKHLFFKFQDSTTLPLMMKAYPEVGWVYLFRDPVEVMVSNLK 218

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BLAST of mRNA_H-paniculata_contig10812.525.1 vs. uniprot
Match: A0A6H5KRY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRY1_9PHAE)

HSP 1 Score: 139 bits (351), Expect = 4.910e-33
Identity = 101/299 (33.78%), Postives = 153/299 (51.17%), Query Frame = 1

Query:  337 IEDVSLEDFEAPEGKLWIPAAMVGPVNVDGSDPLHDVTVAYCQLDMQAYHEAPWLFAMGVYHQRQSGCLDDK-SLVRNYRLSSLAALVDANPGAFLTPSGFIYHETRCGSTLSANMMAAVPTNIVH--------------RCSDELKVRVLRLVMTLMGPAQQGHANSFFKFQSSKFVTAMEIAWPDVPWIYLFRDPLEVMASNLKASW-------RKVAPRHDRNETITKPDGVYNLGGPCVRSVAKAGGNGRGRRSPPPGELVDGCAKQLESLNQMALNQIRGGSPNGVVVEYRQLP 1167
            ++ + L+D +  +G LWIP ++    N++ +DPL    V  CQ++  +Y  APWL  MG      SGC D K   V+   +S+L  L++ +      P+GFI+HETRCGSTL ANM+A+V TN++               +C  E  V  LR++M  M  + + H + +FKFQSS+ + A+  A+PD PWI++FR+P+EVM S L A         ++VA R +R    +K           + S  K G         PP E     A+ L  L + A++        G++VEY  LP
Sbjct:  184 LDTLDLDDVK--DGHLWIPVSVNKFDNLE-TDPL----VKMCQVNYDSYSAAPWLLPMGGLLSIASGCADLKRDTVQIVHMSTLKRLLEESTVPIPPPTGFIFHETRCGSTLVANMLASVETNVMWSESTGPWKVMHTCPKCHKEQIVPWLRVIMDAMTRSAR-HKHFYFKFQSSEDIDAVTSAYPDTPWIFIFREPIEVMMSRLGAQRIGMEGMEKEVAARVERGMKPSK-----------ILSKPKLG--------KPPKETS--AAQLLAGLCKKAIHAFEENPGKGMMVEYPHLP 453

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BLAST of mRNA_H-paniculata_contig10812.525.1 vs. uniprot
Match: A0A836CJX0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJX0_9STRA)

HSP 1 Score: 126 bits (317), Expect = 6.920e-29
Identity = 93/309 (30.10%), Postives = 140/309 (45.31%), Query Frame = 1

Query:  289 GLKGMQKGVQPDRRNVIEDVSLEDFEAPEGKLWIPAAMVGPVNVDGSDPLHDVTVAYCQLDMQAYHEAPWLFAMGVYHQRQSGCLDDKSLVRNYRLSSLAALVDANPGAFLTPSGFIYHETRCGSTLSANMMAAVPTNIVH------------RCSDELKVRVLRLVMTLMGPAQQGHANSFFKFQSSKFVTAMEIAWPDVPWIYLFRDPLEVMASNLKASWRKVAPRHDR---NETITKPDGVYNLGGPCVRSVAKAGGNGRGRRSPPPGELVDGCAKQLESLNQMALNQIRGGSPNGVVVEYRQLPE 1170
            GL G  +  QP          + DF A EG+ W        V V G        V++C +++  Y   PW   M       S C   ++  R Y L+ L A    NP  +L+PSGFI+HETRCGSTL ANM+A +PT ++             + S EL+V  +R +   +   Q  H   FFK      ++  +  +PD PW++LFR+PL+V+ SN++ +W K    +      + I K         PC+R     G      R   P E+   CA  L+ + + A+   R      +V++Y+ LPE
Sbjct:   35 GLLGGSRDPQPS--------GVVDFPAVEGREW----RAKDVYVTGEGTF----VSFCNMNIADYQSEPWKTPMDQMLAVASNCRS-RTHTRKYSLADLMAHQQRNPERYLSPSGFIHHETRCGSTLVANMIAHIPTALMVSESLVPYKALQLKASGELRVSEVRALFRALCFTQHHHDRCFFKLPGGTMLSQFQEVFPDTPWVFLFREPLDVVVSNMRGAWGKKELLYSEAASGQLIEKAS--KKAIAPCLRMPLPDGVT----RDDAP-EMR--CAGGLDKICRDAMAAARARPDLALVLDYKNLPE 317

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BLAST of mRNA_H-paniculata_contig10812.525.1 vs. uniprot
Match: A0A4D9CT70_9STRA (JmjC domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CT70_9STRA)

HSP 1 Score: 122 bits (307), Expect = 1.070e-26
Identity = 96/307 (31.27%), Postives = 139/307 (45.28%), Query Frame = 1

Query:  334 VIEDVSLEDFEAPEGKLWIPAAMVGPVNVDGSDPLHDVTVAYCQLDMQAYHEAPWLFAMGVYHQRQSGCLDDKSLVRNYRLSSLAALVDANPGAFLTPSGFIYHETRCGSTLSANMMAAVPTNIVHR----------------CSDELKVRVLRLVMTLMGPAQQGHANSFFKFQSSKFVTAMEI--AWPDVPWIYLFRDPLEVMASNLKASWRKVAPRHDRNETITKPDGVYNLGGPCVRS----------VAKAGGNGRGRRSPPPGELVDGCAKQLESLNQMALNQIRGGSPNGVVVEYRQLPE 1170
            V+  + L   +  +  L +P      V + G    HD+ +A CQ D+  YH  P  F M    +   G    K+ ++ ++L+S+ A VD   G  L P+GFI+HE+R GSTL ANM+A+VPTN+V+                 CS+E  VR+LR+ +  MG +   H + F KF SS  V    I  A+P+ PW Y++RDP+E++ SN +                         GGPC+R+          + K    G  R S       + CA  L  L Q AL Q+      G  V Y  L E
Sbjct:  124 VVRRLHLNPSDLKDEDLVMPIMYAMGVELQGD---HDLDMALCQFDISPYHRNPEQFPMS---RDLVGAFCSKNRLK-HKLASVHA-VDERAGKQLQPTGFIFHESRVGSTLVANMLASVPTNLVYSEPSVPAHVIHLCKSAGCSEETTVRLLRMAILAMGRSHH-HDHFFIKFSSSTVVDMDLILKAFPETPWAYIYRDPVEIIVSNFQRG----------------------RGGPCIRAKKNAPKAVQDILKTDRRGASRVSDE-----EYCAAHLTMLCQAALEQMELPGSKGHAVAYETLVE 394

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BLAST of mRNA_H-paniculata_contig10812.525.1 vs. uniprot
Match: A0A6H5JFB5_9PHAE (JmjC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFB5_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 4.250e-24
Identity = 92/292 (31.51%), Postives = 134/292 (45.89%), Query Frame = 1

Query:  388 IPAAMVGPVNVDGSDPLHDVTVAYCQLDMQAYHEAPWLFAMGVYHQRQSG-CLDDKSLVRNYRLSSLAALVDANPGAFLTPSGFIYHETRCGSTLSANMMAAVPTNIVHR----------------CSDELKVRVLRLVMTLMGPAQQGHANSFFKFQSS--KFVTAMEIAWPDVPWIYLFRDPLEVMASNL--KASWRKVAPRHDRNETITKPDGVYNLGGPCVRSV-------AKAGGNGRGRRSPPPGELVDGCAKQLESLNQMALNQI----RGGSPNGVVVEYRQLP 1167
            +P ++  P+       L D  V  C LD   Y   P+ + M     + SG C   +S   +  +S L   +DANP  +L P+GF++H +RCGSTL+AN+M + P NIV+                 C++E +V  LR V+  MG     H + FFKFQSS  +F+     A+P+ PW++++RDP+ VM S L  KA    +  R  R+              PC+RS+       AK  G         P E    CA  L +L + AL  +      G   G  V+Y  LP
Sbjct:   76 VPVSLGRPIGSVAGGTL-DAQVFMCSLDRDTYFHQPYKYPMFKDLVKLSGGCQGAQSTATS--ISKLQDEIDANPEGYLEPTGFVFHMSRCGSTLTANLMGSSPHNIVYSESKPPVAVMSLCDQVGCTEEQRVAALRTVILAMGKTSF-HKHMFFKFQSSQTRFIHYYRKAFPNTPWVFVYRDPVPVMMSLLGFKAG---MTQRPSRST-------------PCLRSMGSPPDETAKLLGMSTSEAKKAPFERY--CAAHLATLVESALESVDDAAASGGAEGHAVDYETLP 345

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BLAST of mRNA_H-paniculata_contig10812.525.1 vs. uniprot
Match: D7FTH5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTH5_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 2.400e-21
Identity = 80/212 (37.74%), Postives = 106/212 (50.00%), Query Frame = 1

Query:  619 LTPSGFIYHETRCGSTLSANMMAAV-----------PTNIVHRC-----SDELKVRVLRLVMTLMGPAQQG--HANSFFKFQSSKFVTAMEIAWPDVPWIYLFRDPLEVMASNLKASWRKVAPRHDRNETITKPDG--VYNLGGPCVRSVAKAG---------------GNGRGRRSPPPG---ELVDGCAKQLESLNQMALNQIRGGSPNG 1140
            L P GFIYHETRCGSTL ANM+A +           PT  +  C        L V++ R  M LMG  + G  H + +FKFQ+SK ++    A+P+VPW+++FRDP+EVM SNLK+       R  R E + K        LGG    ++ K+                G GRGR S P G   E V G  K+  SL + A+  + GGS  G
Sbjct:  196 LPPKGFIYHETRCGSTLVANMLATLAPSRVFSESKPPTQTIRECLTAGCDRHLLVKMFRNTMALMGRRRNGEQHEHLYFKFQNSKQISE---AYPEVPWVFVFRDPVEVMVSNLKSYAGAPCVRIPRQEKLRKQASRKFKKLGGGGEPAMLKSKAARDAAALQKTRPKFGRGRGRGSEPWGREPEGVRGGGKRSRSLVEAAV--VLGGSAPG 402

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BLAST of mRNA_H-paniculata_contig10812.525.1 vs. uniprot
Match: A0A7S2SP01_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SP01_9STRA)

HSP 1 Score: 105 bits (263), Expect = 2.490e-21
Identity = 88/271 (32.47%), Postives = 127/271 (46.86%), Query Frame = 1

Query:  409 PVNVD-GSDPLHDVTVAYCQLDMQAYHEAPWLFAMGVYHQRQSGCLDDKSLVRNYRLSSLAALVDANPGAFLTPSGFIYHETRCGSTLSANMMAAVPTNIVHRCSDEL-------KVRVLRLVMTLMGPAQQGHANSFFKFQS--SKFVTAMEIAWPDVPWIYLFRDPLEVMASNLKASWRKVAPRHDRNETITKPDGVYNLGGPCVRSVAKAG-------GNGRGRRSPPPGELVDGCAKQLESLNQMALNQIRGGSPNGVVVEYRQLPE 1170
            P++V  G+DP    +V  C+L+   Y   P    M  +    S C    S  R  RLS+L   ++A+P   L P+GF++HETRCGSTL A+M+A+ P ++V   S          +  VLR VM LM  +   H   FFKFQS  +  +   + A+P+VPW ++FR+P++VM S+ K                         G  C+RS +          G   GRR        D CA  L  L+Q AL      S NG+++ Y  LP+
Sbjct:  124 PISVGAGNDP----SVTLCKLNYDKYWREPSSLPMFKHLVGASNCRG--SNYRTERLSTLKKEMEADPDGTLQPTGFVFHETRCGSTLVADMLASHPHHLVFSESSPPASVAATGRASVLRDVMLLMCRSHY-HTRCFFKFQSINTPRIGVFQQAFPEVPWAFVFREPVQVMMSHFKGG---------------------TSGAVCLRSKSSPTKAHLAILGVSSGRRV----SNEDFCAAHLAYLSQSALAAFERSS-NGMMLSYEDLPD 361

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BLAST of mRNA_H-paniculata_contig10812.525.1 vs. uniprot
Match: A0A7S3ZKE9_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZKE9_9STRA)

HSP 1 Score: 105 bits (262), Expect = 2.630e-21
Identity = 87/296 (29.39%), Postives = 132/296 (44.59%), Query Frame = 1

Query:  379 KLWIPAAMVGPVNVDGSDPLHDVTVAYCQLDMQAYHEAPWLFAMGVYHQRQSGCLDDKSLVRNYRLSSLAALVDANPGAFLTPSGFIYHETRCGSTLSANMMAAVPTNIVHR--------------CSDELKVRVLRLVMTLMGPAQQG-HANSFFKFQSSKF--VTAMEIAWPDVPWIYLFRDPLEVMASNLKASWRKVAPRHDRNETITKPDGVYNLGGPCVRSVAKAGGNGRGRRSPPPGELV----------------DGCAKQLESLNQMALNQIRGGSPNGVVVEYRQLP 1167
            + W P ++ G   V+  DP     V+ C+L    Y   P    M       S C   ++   N     +    +  P   + PSGF++HE+R GSTL ANM+AAVPTNIV+               CS + K  +L+ ++ LMG +    H + FFKFQS+    + ++  A+P+ PW++++RDP++ M S+ K                   +GV N  GPC+R           RRSPPP  +                 + CA  L  L   AL+   G S  G++V+Y  +P
Sbjct:  107 RFWAPVSIAG---VEHGDP----RVSLCKLAFDTYWRDPSKTPMFRDLASASRCGRGRAGTLNTLYEDMRKK-NIKP---VKPSGFVFHESRVGSTLVANMLAAVPTNIVYSESAPPPAVLNHCRSCSKQRKTDILQKLIALMGASPTNYHTHLFFKFQSATVPNIRSLLDAFPETPWLFVYRDPVQTMMSHFK-------------------NGVGN--GPCLRQ----------RRSPPPATIKILKAESAAKASRTSPENYCAAHLAMLTSSALDA-DGSSDRGLLVDYASMP 359

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig10812.525.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig10812.525.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G7Z3_ECTSI	1.710e-128	53.32	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A6H5K3E4_9PHAE	3.690e-42	44.71	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G7C8_ECTSI	7.150e-40	43.07	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KRY1_9PHAE	4.910e-33	33.78	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A836CJX0_9STRA	6.920e-29	30.10	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A4D9CT70_9STRA	1.070e-26	31.27	JmjC domain-containing protein n=3 Tax=Monodopsida...	[more]
A0A6H5JFB5_9PHAE	4.250e-24	31.51	JmjC domain-containing protein n=2 Tax=Ectocarpus ...	[more]
D7FTH5_ECTSI	2.400e-21	37.74	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A7S2SP01_9STRA	2.490e-21	32.47	Hypothetical protein n=2 Tax=Rhizochromulina marin...	[more]
A0A7S3ZKE9_9STRA	2.630e-21	29.39	Hypothetical protein n=2 Tax=Pelagomonas calceolat...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig10812	contig	H-paniculata_contig10812:1733..8307 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	121.3
Seed ortholog evalue	9.9e-25
Seed eggNOG ortholog	2880.D7FL26
KEGG ko	ko:K10277
Hectar predicted targeting category	signal peptide
EggNOG free text desc.	tRNAPhe (7-(3-amino-3-carboxypropyl)wyosine37-C2)-hydroxylase activity
EggNOG OGs	KOG2132@1,KOG2132@2759
Ec32 ortholog description	P-loop containing nucleoside triphosphate hydrolase
Ec32 ortholog	Ec-06_009540.1
EC	1.14.11.27
COG Functional cat.	IQ
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko01000,ko03036
Exons	4
Model size	1173
Cds size	1173
Stop	0
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig10812.525.1	prot_H-paniculata_contig10812.525.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig10812 1733..8307 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622928786.2131991-CDS-H-paniculata_contig10812:1732..2320	1622928786.2131991-CDS-H-paniculata_contig10812:1732..2320	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig10812 1733..2320 +
1691480619.378277-CDS-H-paniculata_contig10812:1732..2320	1691480619.378277-CDS-H-paniculata_contig10812:1732..2320	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig10812 1733..2320 +
1622928786.22396-CDS-H-paniculata_contig10812:5759..5884	1622928786.22396-CDS-H-paniculata_contig10812:5759..5884	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig10812 5760..5884 +
1691480619.3877084-CDS-H-paniculata_contig10812:5759..5884	1691480619.3877084-CDS-H-paniculata_contig10812:5759..5884	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig10812 5760..5884 +
1622928786.2355766-CDS-H-paniculata_contig10812:6669..6869	1622928786.2355766-CDS-H-paniculata_contig10812:6669..6869	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig10812 6670..6869 +
1691480619.3950005-CDS-H-paniculata_contig10812:6669..6869	1691480619.3950005-CDS-H-paniculata_contig10812:6669..6869	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig10812 6670..6869 +
1622928786.2481956-CDS-H-paniculata_contig10812:8047..8307	1622928786.2481956-CDS-H-paniculata_contig10812:8047..8307	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig10812 8048..8307 +
1691480619.4061067-CDS-H-paniculata_contig10812:8047..8307	1691480619.4061067-CDS-H-paniculata_contig10812:8047..8307	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig10812 8048..8307 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig10812:1733..8307+
coding sequence from alignment at H-paniculata_contig10812:1733..8307+

protein sequence of mRNA_H-paniculata_contig10812.525.1

>prot_H-paniculata_contig10812.525.1 ID=prot_H-paniculata_contig10812.525.1|Name=mRNA_H-paniculata_contig10812.525.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=391bp
MGRIVVLVSACSVFLVAGWLLVITGGDRSNSNEKLAASVPAVRKVDLSVD
KERQSAERLLPQQTDKKIKGINPAATGPVKGRKDDQDVGKRRPVKGGLKG
MQKGVQPDRRNVIEDVSLEDFEAPEGKLWIPAAMVGPVNVDGSDPLHDVT
VAYCQLDMQAYHEAPWLFAMGVYHQRQSGCLDDKSLVRNYRLSSLAALVD
ANPGAFLTPSGFIYHETRCGSTLSANMMAAVPTNIVHRCSDELKVRVLRL
VMTLMGPAQQGHANSFFKFQSSKFVTAMEIAWPDVPWIYLFRDPLEVMAS
NLKASWRKVAPRHDRNETITKPDGVYNLGGPCVRSVAKAGGNGRGRRSPP
PGELVDGCAKQLESLNQMALNQIRGGSPNGVVVEYRQLPEV

mRNA from alignment at H-paniculata_contig10812:1733..8307+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig10812.525.1 ID=mRNA_H-paniculata_contig10812.525.1|Name=mRNA_H-paniculata_contig10812.525.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6575bp|location=Sequence derived from alignment at H-paniculata_contig10812:1733..8307+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGACGGATAGTGGTATTGGTGTCAGCATGCTCTGTTTTTCTAGTGGC
GGGGTGGTTATTGGTCATAACTGGCGGAGACAGGAGTAATAGCAATGAGA
AGCTCGCCGCTAGCGTTCCTGCTGTCCGTAAAGTAGATTTATCAGTGGAC
AAGGAAAGACAAAGCGCGGAGAGACTCCTTCCGCAGCAAACTGACAAGAA
GATCAAGGGGATCAACCCCGCGGCGACGGGACCTGTCAAGGGCAGAAAAG
ATGACCAAGACGTCGGAAAAAGGCGTCCGGTGAAGGGCGGGCTGAAGGGC
ATGCAAAAGGGCGTACAGCCAGACAGGCGAAATGTGATCGAGGACGTCAG
TCTTGAAGACTTTGAAGCGCCTGAGGGGAAGTTGTGGATCCCCGCGGCGA
TGGTGGGTCCCGTCAATGTCGATGGCAGCGATCCGCTGCATGATGTCACC
GTTGCGTACTGTCAGCTTGACATGCAAGCATATCACGAGGCACCCTGGTT
GTTTGCAATGGGGGTGTACCATCAGCGACAGTCCGGGTGTCTTGATGACA
AGAGCTTGGTGCGGAATTATCGCCTGTCGTCCCTAGCGGTGAGAAATGTA
CTATGGAGCATTTACCTTACTGTAGATCTGTCGACGGTCGTTTTCATTCT
GTCAAGTTGTGTTTCGTGTTCCGATGCAGCTGACCGTTTGTGCTCGCATA
ATATCATCACTTGGCAAAGCTGTTTTGAATGTTCTTATCGTGAGTGGTGT
GCCTTTGTCCAATGTGGCTTCGTGTTATACAAATGTAGCATCTGTTTTTT
GGGGCGTTGGGGTACATGAAGGCCAAGGGGTTCTCCATACATACCTGAAG
TGCAGCTGAAGAGTGTTCTTGGAAGCTTGCTGACAAGTGGTTCGAGAATA
GGGTGGGCACTGAATAAGGCGAGATTAGATACAAGGCGGAGTTTTTTTCG
CGTGTTACAACGGCTTGCTGAATAAGTCAGGTTTTCTATTCTGCACTCAA
AAGCCACCTTGATCCGTGCCGCTCCCGACTGACAAGGCGTTTTTTTTCTA
TTGCGCCGCACACCGGCCTAATTTCAAACAAGGACTCGCAAACCACAGCA
GACCCGCAACCTTGCCCCGCAGCTGGCACACGAATCCATCGGGTGATATT
TTCATTAACCATCGCGTGTGGCGGTTTGTCCCAAATGAGGCGGATGTCGT
GTTATGGGTAAGGCGGAGCCTGCCTTATAACGAAGGAGGCGGTATTAGCT
ACAAGGCGGGTAAATTTGGCTTGTCACTACCCCGCCTTATATCGGGTCCA
CCTCTGTACGCAGCTGCAAGTGTAGGCGACGTAACTTGAGGGTGAAATGT
GGTGTGAGACTTATTGGTCATTTTTTTGAGCTGCTGGGCCAAGGGTGGGT
CCTCAAGTATTCACCCTAGCGCCTGATTTAATCGATTTGTGGATAAAGTA
AGTGACTCACTCAAAAGTGTTAATACTTCCTCTGTTTCATTAGTCTGTGC
TTTTAAGACAATTCCGCAATATGCTTTGTAGTTTAGGGATTCATCAAAAC
GGAGTACACCATTCGAAAGCCCTGGATGTCAGCTATCTTCTACATGTATG
TATCTGGTGTCCTAAATCCGATTGGGGAATCTACCGCGACCCCGGGGTAA
TATGTAGGGGTACGGAATTAAAGTTCCGAATTTTGCAAAAAGGCAAGAAG
CGGCGAAAACGGATGTAAATGTTGATAGCGTCTCAGGGACACCTCCAACG
ACGAAATGCGTTTTTGCATTGAATTCCTTGGATCATTTTGGTCTGAACTC
ATTACCGTTCGTGTCAAACAGAATCACTCTCCTCCTCCCCTTCATTCCAG
CACGTGACCGCAGCTTGGAATGCCTTTTGGACAATTTTGCAGTGTACTGT
CAACTCCCCCTTTCCCCGCCTCTATGCAAAATTGGTGTGTTGCACCTCGA
AGTAGTTGCCCCAAACGCCCCCCAACACCTGGTTGTATCTTTTTAATAGG
CTCTGCCACACCCTTCAAGCAATCCCCTGTCATATTGAGTACTCGTCAAA
AGGCGTCGAAATGCCTGCAACTATCTCCGCAACCGTAAAACTGACGTCAA
GATCTTCTAGCTCCTCCTTGAGCAGTAGAACATTCAAGGTACTGGAGTAT
GATTTTTCGACTTGCACTCCAGGATTATATCATTTGCTGGGCGTCTGGAT
CGACGGCAGCGCAAAAATCTCTTCTTGATACCGAGATTCAGCGTCTTAGT
GTCTGCAAGCTCTCGGAAGACATCACGCCACAATCGATGTCGGTAATCGG
TGGACACTCCGCACTCAGCGGCGAGCTCACCGCAGACGTCTTTGGGCAAT
CTAGATTTCCCAGATGGCAGGGTCTGTGCGTACCACTCAGCCAAACCACA
GCGAGCTGTCTCAGAGAGTTCTCCATGTTTGACGTGAGCAGATCAGCTTG
CAGGGTCTGCCGACCGGCTTGTAGGGGTTGCTGACGGGCTGGCAACGCTC
ACCATGAGGCTGCGTGTGGATGTTTACTGCGTGTTGTGTGTGTTTGTATT
CACCTGCACATGAAAAAAGCGGCAGGATTTTTGCATAGAATGTATTTTTT
TTCCTCAATCGGAACAATATATCTCCTGTAAGTCGGAAATAGCGGACATC
CAGGTCTTTCGAGTGATATCGTCGTTTTTTGTATTGATCCTCAAGCCACA
AGAGATATTTCGAAATTACGTTAACCGCGCAAACCGCTAAGACAGAGGGA
ATAATGGAACAACATAAAAATTTACCCTCCTCCTCCTACCTTAACACCCT
TTGCTGGCGCACCGGGTGTTATGGGATATTAAACTCGCTGTTGCAGTTCG
CACCGATGCGCCATCAAATGGAGGATGATGCGCACATGAGAAAAGTCCCT
GCAATAGGGGGGTGCGATGACGCACCGGGTGCGAATAGCAAGAATCACGT
ATTCGCTGGCAGCTGTCAGTAGCCCCCATTCCAGGGGGGTGCGATGGCAA
CGGTGTGCGCACAGGAAAAAAGCTGTTCCATATCACTGGAAAAAACGGTT
CAATACCACGTGCATGTGCATACAGTATACGGTCTGTACGTTATGATTGC
AGCACGGCTTTCTTCTTTCAATAGAATAATTAAATACTGCATCATATTTC
AATGTACTGTACACACAGCAACGGCAGGCATGACGGTAAAGCGCACCCCA
TAACCATTCAGCCATCGAACAACAATGTCTCTCAAACTGGCTTGAAGTGA
CATCTTCGAGATTGCATCGGTGCGTCCTCACCACAACCCAGCCTGCCAGA
ACGCATCCGGTGCGTTTACAACTGGGGGGGTGCCAAAACAAAAATTGCCT
TTGCAGATCGCACCGGCGCGCCAGCAAAGGGGGGTGCGCTAGCAAAGGGT
TCTACGGTATTCATCGATGGTATTAATGTCGTATTTTCTGTTGACAAGTA
TGGTACTTGAATATCTCAAATGCTCCCAATTTTCGATTTCCGAAACCGTG
GCTTCCAACCCTTTCGATTTTGGGGCTTAAAGATTGCCCATCATGAACAT
ATGTCACTGGGATTTCGGAGCTGATGGCCTTATAACAAAATACGTTACCT
TTTTTTACCCCCCTTCTGTCCTCTGCTTTCGAAGGGGCATCGTGGTGTAC
CTAAATACCTCCATCGGAAACTGTAAGTTTAACAATCATCATGTCCTCAT
TTCTTTCCCTGTCTGTTATGGCAGGTTGATGTTGAACACCCGCCCAACTT
GTTTGCCGGATGATGTATGGCGTAGTATACAGCATATCCGTGCCTTCCGT
CTCTTGTCCTTTTCGCACATTTTTGCATAGTTCGCGACTCGCGAACATAT
GTTATTTGTTTCGGATTCGTGTGTAGAGGTCACGTGAGTGCAAACGTGAA
AAACTGTCATGTTCTCGATTATGATCATCACCGCCACATCAAATCAATTA
TCAAATAAATTCGTAAACGTAGGGATGCGTGTAACCGTTATATTTGCTCA
TACGAATCTTACGTTGTGTACACGCAGGCGTTAGTGGACGCTAATCCGGG
TGCGTTCCTCACACCGTCCGGGTTCATCTACCACGAGACAAGATGCGGAT
CTACGCTGTCGGCCAACATGATGGCTGCTGTGCCCACGAACATCGTGCAC
AGGTTAGATGCATGCTCTGTGTAGAGAAAGCACTCCAACCAATAGATGAT
AGAGTCAGCGTTGACTCTAGTCTCAAAAGATATCACCGCGGGATAAGGAG
GCGTTTCGTTTGTCTTGTTTCTTTTTTTTACGGTAAATTTAACTCTCAGG
CACATCAAGTGGATAATAAGCACTTTGACAATCCTTAGGGAGCTAACTTC
TTTCTGTGATTTGCTTTTTGGCCGTTTTTTTCCCGCACAAAACAGCTATA
GTTTCATGCCAAAAAATGGAATATAGTGATAGGGGGCGATTGTACAGGCG
AGGGAGTGGTCGATCTCTCGCCATGTCTGAGAAGGGCGTTGGTTGGTTCG
TCGGCAGTTTTTCCATTGCCGAAAGAGCAGCAATTGTTTATTCGTTCTTG
TCGTGCGTTCGGAAGGGGTTTACGTTGAAAGAAGACGCTTGGCAGAAAAA
ACATCACCTCTAACAGAAGAGTGATTCAATAAACATATCTTTTCTTCGAG
TGTTTTCGCCGACAGGAGCTGAACCTGATGTTTTACTTGTCATTAGTCTT
GAGCGACGCATCGCCGCATCTGTCCAAATAACTGATAGGGGCTTAGTTAT
TTGGAGTATCATATGTACGACAATGTTTTGTGGCACAGGGCCATGATGTC
ATTTTCCATTTACCTTCTGTGCTGCCACGACTATTAGATCAGCGCACTGC
TCGTATGTGTCGTTTTGCCTTTCTTGCAATTATGTCATGTGCTAGTGAGA
CTGCGCCACCCATATCAGCGATTTCAGTATGCGGGAGGTGCTCGGACGAG
CTCAAGGTTAGGGTTCTACGCCTCGTGATGACTCTCATGGGACCCGCCCA
ACAAGGCCACGCCAACAGCTTCTTCAAGTTCCAGAGCTCGAAGTTTGTCA
CGGCTATGGAAATCGCGTGGCCAGATGTGCCATGGATCTATTTATTCCGC
GACCCGTTGGAAGTCATGGCCTCCAACCTCAAGGCGTGTATGCTGTTTTT
TATTTACATGCTACCTTAGAGTTCTAACCCGTTTATGCTACTGCTTTTAG
CCCTTTGGCCAGGGCGGTCCATTTTCGTGTACTGATGAAGGCTGGATTGG
AGTTTTTTTTCTTTCTTTTTTTTACCTAGTTATGGACTTTTTAATATATT
TTTTAATTCTTTGTGCAGCTGTTATACTATGATTTTAAAAGAGTCAAAGA
CGTTTCTGCTGTAGTTGACAAGCTGTGTCAACGAATAGAAATGGAAGGCT
CTTTGCTTGGGGCTACAAGCCTGGGATCGTGAAAATCAAATACGAAGCTG
TTTTGAACAACGGGATATGAACGGACCAGAGATACACCATACCCAACCAT
CGCAGTCAAATGGTCCACGTAAAATCGCTATCAGGCCCAAACTCATAGAA
ACTAATTCACCAGGGAATGAAATGTACCGGTACTTGCATTCAATCATTAA
ACCCCCGCATGGCTAGATCTGGAACGGCCGAGTGTCTGACTGCACAACGG
AAACAAGGAAATGATGGGTTCTGAGTGGAAATTAAAAAAAAAAAAAAGCG
AAAGTTCGTTTTTATCGTCATTACTTGTATCCTCGCTTAACTCTCTTCCC
TATTGTCATGCCAATGCTTACTTACTTGTATGCACTGCTGACAGTCCCTG
GTATTGGTCTAGCAACCTCAAACCGGCGCTGAATCAGTGACCACCCACGC
CAATATTTCCGGCGGGCCTCAAAAGCAGTTTGTAGTCAAATCGGCGATTC
CAAAAGATCACAAAACATCCCCAGAGTAAGTGTCTCTAGTCTCCTGAGGG
TCGTTGAGGTTCCATTACAGACACAGATCTATCTGTTTGATAGGGGCAAG
TAGTGCCTGGTGTGTCGAATTGTGTGCCAATGTCTTGTTCTCCTGTACTA
TCTATGCCCGCTATGACTACATATCTGATATTTCGGATTTCCTGGATGTA
CATAAGAAAATCGTGTTACGATTGCTTCGTGTTTTCGCACGCAGAAGAAA
AACCTATAAAAAACGTATCATGATGCAGTGACAAGACGCCAATGCTATTT
CCTCCTGTCAAACACACACACACACATACACACATTCGTTGCTCCATCTC
TCCGCCGACACACGGCAATCTTTAACATTTAACCGTTGAAAATGGACTGA
TCATGACACAGGGAGCATGGCGCAAGGTGGCGCCAAGGCACGATCGCAAC
GAAACGATTACCAAGCCCGATGGAGTCTACAATCTGGGAGGGCCGTGCGT
CCGGTCGGTTGCAAAGGCTGGGGGGAATGGTCGCGGCCGGAGGAGCCCGC
CACCGGGGGAGCTCGTAGACGGGTGCGCGAAGCAATTGGAGTCGCTGAAT
CAAATGGCGTTGAATCAGATTCGGGGCGGCTCGCCCAATGGTGTGGTTGT
GGAATATCGACAGTTGCCGGAGGTA

Coding sequence (CDS) from alignment at H-paniculata_contig10812:1733..8307+

>mRNA_H-paniculata_contig10812.525.1 ID=mRNA_H-paniculata_contig10812.525.1|Name=mRNA_H-paniculata_contig10812.525.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2346bp|location=Sequence derived from alignment at H-paniculata_contig10812:1733..8307+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGACGGATAGTGGTATTGGTGTCAGCATGCTCTGTTTTTCTAGTGGC
GGGGTGGTTATTGGTCATAACTGGCGGAGACAGGAGTAATAGCAATGAGA
AGCTCGCCGCTAGCGTTCCTGCTGTCCGTAAAGTAGATTTATCAGTGGAC
AAGGAAAGACAAAGCGCGGAGAGACTCCTTCCGCAGCAAACTGACAAGAA
GATCAAGGGGATCAACCCCGCGGCGACGGGACCTGTCAAGGGCAGAAAAG
ATGACCAAGACGTCGGAAAAAGGCGTCCGGTGAAGGGCGGGCTGAAGGGC
ATGCAAAAGGGCGTACAGCCAGACAGGCGAAATGTGATCGAGGACGTCAG
TCTTGAAGACTTTGAAGCGCCTGAGGGGAAGTTGTGGATCCCCGCGGCGA
TGGTGGGTCCCGTCAATGTCGATGGCAGCGATCCGCTGCATGATGTCACC
GTTGCGTACTGTCAGCTTGACATGCAAGCATATCACGAGGCACCCTGGTT
GTTTGCAATGGGGGTGTACCATCAGCGACAGTCCGGGTGTCTTGATGACA
AGAGCTTGGTGCGGAATTATCGCCTGTCGTCCCTAGCGATGGGACGGATA
GTGGTATTGGTGTCAGCATGCTCTGTTTTTCTAGTGGCGGGGTGGTTATT
GGTCATAACTGGCGGAGACAGGAGTAATAGCAATGAGAAGCTCGCCGCTA
GCGTTCCTGCTGTCCGTAAAGTAGATTTATCAGTGGACAAGGAAAGACAA
AGCGCGGAGAGACTCCTTCCGCAGCAAACTGACAAGAAGATCAAGGGGAT
CAACCCCGCGGCGACGGGACCTGTCAAGGGCAGAAAAGATGACCAAGACG
TCGGAAAAAGGCGTCCGGTGAAGGGCGGGCTGAAGGGCATGCAAAAGGGC
GTACAGCCAGACAGGCGAAATGTGATCGAGGACGTCAGTCTTGAAGACTT
TGAAGCGCCTGAGGGGAAGTTGTGGATCCCCGCGGCGATGGTGGGTCCCG
TCAATGTCGATGGCAGCGATCCGCTGCATGATGTCACCGTTGCGTACTGT
CAGCTTGACATGCAAGCATATCACGAGGCACCCTGGTTGTTTGCAATGGG
GGTGTACCATCAGCGACAGTCCGGGTGTCTTGATGACAAGAGCTTGGTGC
GGAATTATCGCCTGTCGTCCCTAGCGGCGTTAGTGGACGCTAATCCGGGT
GCGTTCCTCACACCGTCCGGGTTCATCTACCACGAGACAAGATGCGGATC
TACGCTGTCGGCCAACATGATGGCTGCTGTGCCCACGAACATCGTGCACA
GGCGTTAGTGGACGCTAATCCGGGTGCGTTCCTCACACCGTCCGGGTTCA
TCTACCACGAGACAAGATGCGGATCTACGCTGTCGGCCAACATGATGGCT
GCTGTGCCCACGAACATCGTGCACAGGTGCTCGGACGAGCTCAAGGTTAG
GGTTCTACGCCTCGTGATGACTCTCATGGGACCCGCCCAACAAGGCCACG
CCAACAGCTTCTTCAAGTTCCAGAGCTCGAAGTTTGTCACGGCTATGGAA
ATCGCGTGGCCAGATGTGCCATGGATCTATTTATTCCGCGACCCGTTGGA
AGTCATGGCCTCCAACCTCAAGGCGTGTGCTCGGACGAGCTCAAGGTTAG
GGTTCTACGCCTCGTGATGACTCTCATGGGACCCGCCCAACAAGGCCACG
CCAACAGCTTCTTCAAGTTCCAGAGCTCGAAGTTTGTCACGGCTATGGAA
ATCGCGTGGCCAGATGTGCCATGGATCTATTTATTCCGCGACCCGTTGGA
AGTCATGGCCTCCAACCTCAAGGCGTCATGGCGCAAGGTGGCGCCAAGGC
ACGATCGCAACGAAACGATTACCAAGCCCGATGGAGTCTACAATCTGGGA
GGGCCGTGCGTCCGGTCGGTTGCAAAGGCTGGGGGGAATGGTCGCGGCCG
GAGGAGCCCGCCACCGGGGGAGCTCGTAGACGGGTGCGCGAAGCAATTGG
AGTCGCTGAATCAAATGGCGTTGAATCAGATTCGGGGCGGCTCGCCCAAT
GGTGTGGTTGTGGAATATCGACAGTTGCCGGAGGTACATGGCGCAAGGTG
GCGCCAAGGCACGATCGCAACGAAACGATTACCAAGCCCGATGGAGTCTA
CAATCTGGGAGGGCCGTGCGTCCGGTCGGTTGCAAAGGCTGGGGGGAATG
GTCGCGGCCGGAGGAGCCCGCCACCGGGGGAGCTCGTAGACGGGTGCGCG
AAGCAATTGGAGTCGCTGAATCAAATGGCGTTGAATCAGATTCGGGGCGG
CTCGCCCAATGGTGTGGTTGTGGAATATCGACAGTTGCCGGAGGTA