mRNA_H-paniculata_contig203.5250.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig203.5250.1 vs. uniprot
Match: D8LT21_ECTSI (Polyketide_cyc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LT21_ECTSI) HSP 1 Score: 403 bits (1035), Expect = 8.950e-136 Identity = 201/284 (70.77%), Postives = 231/284 (81.34%), Query Frame = 1
Query: 241 GRLLSSLTLAAVCVV----VAKGGAG-EPHPHQGKTKPYKPGKPDIKLTKKQLADLNEGNLVQDMLKGETDEDGGKGGRALAVQDVNAPVEYVWDRILDFGKYNKMVPKVSHCQNYETQKMRNGTEIIKTDLRINVLGVKLNSFIYHTYFPALSSLTWTLDYSKKSSLADDSVGFWHVAKHPSADKNEDWSRVYYSIKLRIPSWVPGLVIGYLNKKAIREATTWVKRESELQYQGDLAAGRTLGGARKGPSLSLPA-WG----GLGIKSAQSSEAAGWMPKWLK 1062
G L++ T+ A C++ VA+G A E HPHQGK KPYKPG PDI LTKKQ DL+ G+LVQDMLKGETDEDGGKGGRALAVQDVNAP EYVWDRILDFG YNKMVPKV+ C+NYET+ +RNGTEIIKT+L++NV GVKLNSF YHTYFP+ SS+TWTLDY+KKS+L DDSVGFWHVA HPS DK DWSRVYYS++LRIPSW+PG+VIGYLNKKAIREATTWVKRESE +Y+ D AAGRTLGG + G ++ LP WG GLG K+ GWMP W+K
Sbjct: 18 GLKLAAATMGAACMLFLPGVAQGSAAAEAHPHQGKVKPYKPGMPDIVLTKKQRTDLDGGDLVQDMLKGETDEDGGKGGRALAVQDVNAPAEYVWDRILDFGNYNKMVPKVTECKNYETETLRNGTEIIKTNLKLNVFGVKLNSFFYHTYFPSKSSMTWTLDYTKKSTL-DDSVGFWHVATHPSQDKQADWSRVYYSVQLRIPSWIPGIVIGYLNKKAIREATTWVKRESEEKYKADFAAGRTLGGKKPG-AVGLPGGWGAALSGLGSKTGSKEGGGGWMPSWMK 299
BLAST of mRNA_H-paniculata_contig203.5250.1 vs. uniprot
Match: A0A835Z7Q3_9STRA (Polyketide_cyc domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Q3_9STRA) HSP 1 Score: 254 bits (650), Expect = 4.460e-78 Identity = 137/266 (51.50%), Postives = 174/266 (65.41%), Query Frame = 1
Query: 247 LLSSLTLAAVCVVVAKGGAGEPHPHQGKTKPYKPGKPDIKLTKKQLADLNEGNLVQDMLKGETDEDGGKGGRALAVQDVNAPVEYVWDRILDFGKYNKMVPKVSHCQNYETQKMRNGTEIIKTDLRINVLGVKLNSFIYHTYFPALSSLTWTLDYSKKSSLADDSVGFWHVAKHPSADKNE--DWSRVYYSIKLRIPSWVPGLVIGYLNKKAIREATTWVKRESELQYQGDLAAGRTLGGARKGPSLSLPAWGGLGIKSAQSSEAA 1038
LL +L LAAV PHPHQG + PY PGKP+ +L K + L +G LVQ K GG GRALAVQD++AP +YVWDRILDFG Y KMVPKV C NYE + RNGTE IKT + +NV G K ++ IYHTYF +LSSLTWTLDY+++S+L DDSVG+W+V P K + +WSRVYYS LR+P WVPG+V+ +L KKA+ EA W+KRE+E ++ D +G+ LG R G + +GG +K A AA
Sbjct: 5 LLLALGLAAVAARKEL----TPHPHQGLSDPYPPGKPETELASKDIQLLRDGKLVQQSFK-----KGGGAGRALAVQDLHAPPDYVWDRILDFGNYPKMVPKVVKCNNYEVETFRNGTEAIKTRMVMNVFGAKFDNHIYHTYFKSLSSLTWTLDYARRSTL-DDSVGYWYVEPCPDKSKQDVQEWSRVYYSCMLRVPKWVPGIVVNFLEKKAVSEANMWLKREAEAKFAKDKVSGQQLG-KRGGTGGGV--FGGFSLKGAGQHAAA 257
BLAST of mRNA_H-paniculata_contig203.5250.1 vs. uniprot
Match: A0A7S2R0C2_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R0C2_9STRA) HSP 1 Score: 194 bits (493), Expect = 1.720e-54 Identity = 104/252 (41.27%), Postives = 150/252 (59.52%), Query Frame = 1
Query: 208 FYARHQNMVSAGRLLSSLTLAAVCVVVAKGGAGEPHPHQGKTKPYKPGKPDIKLTKKQLADLNEGNLVQDMLKGETDEDGGKGGRALAVQDVNAPVEYVWDRILDFGKYNKMVPKVSHCQNYETQKMRNG-----TEIIKTDLRINVLGVKLNSFIYHTYFPALSSLTWTLDYSKKSSLADDSVGFWHVAKHPSADKNEDWSRVYYSIKLRIPSWVPGLVIGYLNKKAIREATTWVKRESELQYQ---GDLA 939
++ + +V G LL + A + EPHPH GK P++PG P + L K L L G + + D G GGR L VQDV+AP + VW RILD+ Y+KMVPK +NY+ KM+ +EII T +++ + +KL FI H Y+P+L+SLTWTLDY+KKS DDS G+W++ HP DK + W+RVYYS+++ + W+P + +++ KA+ +AT WVK+ SEL+YQ GD A
Sbjct: 2 WFFKSSILVWCGVLLVTTVFMAPKSLCEASSFSEPHPHNGKVTPFEPGDPKVPLDGKALQILESGKPYKTQI------DSGAGGRGLVVQDVHAPSDVVWGRILDYDNYSKMVPKTVDSRNYDVTKMKPSKKDPLSEIIFTRMKVGLPLLKLEFFIKHLYYPSLNSLTWTLDYTKKSDF-DDSCGYWYIIPHP--DKPQSWTRVYYSVEVSMFDWIPKFALDFISAKALVDATAWVKKFSELEYQKQGGDTA 244
BLAST of mRNA_H-paniculata_contig203.5250.1 vs. uniprot
Match: A0A4D9DD14_9STRA (Polyketide_cyc domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DD14_9STRA) HSP 1 Score: 177 bits (450), Expect = 6.440e-49 Identity = 95/210 (45.24%), Postives = 126/210 (60.00%), Query Frame = 1
Query: 319 HQGKTKPYKPGKPDIKLTKKQLADLNEGNLVQDMLKGETDEDGGKGGRALAVQDVNAPVEYVWDRILDFGKYNKMVPKVSHCQNYETQ-KMRNGTEIIKTDLRINVLGVKLNSFIYHTYFPALSSLTWTLDYSKKSSLADDSVGFWHVAKHPSADKNEDWSRVYYSIKLRIPSWVPGLVIGYLNKKA---------IREAT-TWVKRESE 915
H G KP+KPG P I+L K ++ L +G V+ L G GGR L +QDV AP E VW RI+DF Y +MVP+VS C+NY Q G + I T +R+ V+G + FI+H YFP L+++ WTLDY+++S L DDSVG+WHV HP D+ E WSRVYYSI +R+ SW+P V L +A +REA W +R E
Sbjct: 37 HNGLVKPFKPGPPSIRLKKTEVEKLRKGEAVKQQLSS------GSGGRGLVIQDVEAPPEVVWGRIMDFPAYTRMVPRVSLCENYRVQDNYLQGLKEIFTRMRLTVMGFNVEYFIHHKYFPKLNTVVWTLDYNRESDL-DDSVGYWHVIPHPDPDR-EHWSRVYYSIDMRLKSWMPSFVKNVLKNQAPDLSKVRDNMREARENWCRRLKE 238
BLAST of mRNA_H-paniculata_contig203.5250.1 vs. uniprot
Match: A0A7S3PX78_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PX78_9STRA) HSP 1 Score: 179 bits (453), Expect = 1.250e-48 Identity = 103/270 (38.15%), Postives = 152/270 (56.30%), Query Frame = 1
Query: 247 LLSSLTLAAVCVVVAKGGA-GEPHPHQGKTKPYKPGKPDIKLTKKQLADLNEGNLVQDMLKGETDEDGGKGGRALAVQDVNAPVEYVWDRILDFGKYNKMVPKVSHCQNYETQKMRNG-----TEIIKTDLRINVLGVKLNSFIYHTYFPALSSLTWTLDYSKKSSLADDSVGFWHVAKHPSADKNEDWSRVYYSIKLRIPSWVPGLVIGYLNKKAIREATTWVKRESELQYQGDLAAGRTLGGARKGPSLSLPAWGGLGIKSAQSSEAA 1038
L SS+ + C+ + EPH H G P+KPG P I L KK L+ L G Q ++ E+ GGR L VQDV+AP VW RILD+ Y M PK +NY+ + ++ ++II T L++ +KL FI H Y+P L+SLTWTLDY+KKS +DS GFW+V HP+ N +R+YYS+++ + WVP V+ +++ KA+ +AT WVK+ SE ++Q GG + S+++ + G +K +S E A
Sbjct: 3 LFSSILVVCACLPATNASSFTEPHDHNGIVTPFKPGDPKIALDKKTLSILENGKPYQTQIQSES------GGRGLVVQDVDAPTSVVWGRILDYDNYKNMAPKTIESKNYKVENVKPTKKDPLSQIIFTRLKVGFPVLKLEFFIKHLYYPDLNSLTWTLDYTKKSDF-NDSCGFWYVLPHPNDPDNR--TRLYYSVEISMFDWVPKFVVDFMSTKALTDATGWVKKYSEQEFQKQ-------GGMKTTKSIAVTSVGN--VKEVESDEKA 254
BLAST of mRNA_H-paniculata_contig203.5250.1 vs. uniprot
Match: A0A4D9CYH6_9STRA (Polyketide_cyc domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CYH6_9STRA) HSP 1 Score: 179 bits (453), Expect = 7.070e-48 Identity = 99/252 (39.29%), Postives = 141/252 (55.95%), Query Frame = 1
Query: 217 RHQNMVSAGRLLSSLTLAAVCV---VVAKGGAGE------PHPHQGKTKPYKPGKPDIKLTKKQLADLNEGNLVQDMLKGETDEDGGKGGRALAVQDVNAPVEYVWDRILDFGKYNKMVPKVSHCQNYETQKMRNGTEIIKTDLRINVLGVKLNSFIYHTYFPALSSLTWTLDYSKKSSLADDSVGFWHVAKHPSADKNEDWSRVYYSIKLRIPSWVPGLVIGYLNKKAIREATTWVKRESELQYQGDLAAG 945
RH G++L LA + ++ GE PH H+G + Y+ P + L K + L G V+ ++ G GGR + VQDV+AP V DRILDF YNKMVP V+ C NY +K+ +G ++T ++++G KL F+ H Y P++ +LTWTLDY ++S L +D+ G+W V K DWSRV+YS+ LRIP+WVP LV+ LN +A+ AT WVK +SE YQ +G
Sbjct: 28 RHLTESKEGQMLPRTRLALISALLGIIVHPFPGEAANPKLPHTHRGMLEKYELKVPRLALDKAAVERLERGYPVKKQIQAA----GRAGGRGIVVQDVHAPASVVMDRILDFDNYNKMVPNVAQCGNYAKRKLMHGDVELRTRYVLSIIGFKLEYFVRHLYRPSIRTLTWTLDYDRQSDL-EDTAGYWSVVPLDKEGKVGDWSRVFYSVDLRIPAWVPQLVVNILNTQALTTATAWVKTQSERAYQTSALSG 274
BLAST of mRNA_H-paniculata_contig203.5250.1 vs. uniprot
Match: A0A7S0I6R2_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I6R2_9EUKA) HSP 1 Score: 176 bits (446), Expect = 1.620e-47 Identity = 106/236 (44.92%), Postives = 134/236 (56.78%), Query Frame = 1
Query: 208 FYARHQNMVSAGRLLSSLTLAAVCVVVAKGGAGEPHPHQGKTKPYKPGKPDIKLTKKQLADLNEGNLVQDMLKGETDEDGGKGGRALAVQDVNAPVEYVWDRILDFGKYNKMVPKVSHCQNYETQKMRNGTEIIKTDLRINVLGVKLNSFIYHTYFPALSSLTWTLDYSKKSSLADDSVGFWHVAKHPSADKNEDWSRVYYSIKLRIPSWVPGLVIGYLNKKAIREATTWVKRESE 915
F RH +A RLL L L A A +PH + G P+ KP + LT + L G V + GKGGRALAVQDV A E VW+RIL F +Y KMV V C Y+T RNGT+ I+T +++ V+GV L FI HTY P L LTWTLDY++ S L D SVG+W V H + SRV+YS+ +PSWVPG V+ + KKA+ +AT+WVK ESE
Sbjct: 11 FARRHYLAGTAMRLLLCLLLQLRAGRAAD--ASKPHMNGGVNPPFASAKPQVSLTGSEETALAAGRAVTRQVANAN----GKGGRALAVQDVAASPETVWNRILAFPEYPKMVTGVQECSVYDTSTHRNGTQTIRTRMKLGVMGVSLEYFIEHTYAPRLGVLTWTLDYARLSDLID-SVGYWAVVPHA---RTPGASRVFYSVDAALPSWVPGFVVTAVTKKALTDATSWVKVESE 236
BLAST of mRNA_H-paniculata_contig203.5250.1 vs. uniprot
Match: A0A6U4DG12_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U4DG12_9STRA) HSP 1 Score: 175 bits (444), Expect = 6.520e-47 Identity = 99/240 (41.25%), Postives = 140/240 (58.33%), Query Frame = 1
Query: 244 RLLSSLTLAAVCV----VVAKGGAGEPHPHQGKTKPYKPGKPDIKLTKKQLADLNEGNLVQDMLKGETDEDGGKGGRALAVQDVNAPVEYVWDRILDFGKYNKMVPKVSHCQNYETQKMRNGT-----EIIKTDLRINV-LGVKLNSFIYHTYFPALSSLTWTLDYSKKSSLADDSVGFWHVAKHPSADKNEDWSRVYYSIKLRIPSWVPGLVIGYLNKKAIREATTWVKRESELQYQGD 933
RL+ SL L V + ++ PH H+GK P+ PG P++ L K L+ L+ G Q + G GR L VQ+V+AP + VWDRILDF Y MVP+ C+NY+ QK + + I T ++ + L K++ ++ H Y+P LSSLTWTLDYSKKS DDSVG+W+V HP WSRVYYSI + + WVP V+ +++ KA+ +AT WVK+ SE +++ D
Sbjct: 26 RLMLSLLLLLVILPDASLILASDPSVPHAHKGKQDPFSPGDPNVSLDSKALSILSSGQPFQTTIH----VPGSTSGRGLVVQEVHAPPDAVWDRILDFNHYADMVPRTFECKNYDEQKHKATKRDPLEQTIYTKFKVGLPLIPKMSFYVKHLYYPTLSSLTWTLDYSKKSDF-DDSVGYWYVVPHPD---RLGWSRVYYSIAVSMFDWVPKTVVNFMSTKALTDATGWVKKFSEEKWKSD 257
BLAST of mRNA_H-paniculata_contig203.5250.1 vs. uniprot
Match: A0A6U3P4E9_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3P4E9_9STRA) HSP 1 Score: 169 bits (428), Expect = 7.400e-45 Identity = 89/211 (42.18%), Postives = 125/211 (59.24%), Query Frame = 1
Query: 307 EPHPHQGKTKPYKPGKPDIKLTKKQLADLNEGNLVQDMLKGETDEDGGKGGRALAVQDVNAPVEYVWDRILDFGKYNKMVPKVSHCQNYET-----QKMRNGTEIIKTDLRINVLGVKLNSFIYHTYFPALSSLTWTLDYSKKSSLADDSVGFWHVAKHPSADKNEDWSRVYYSIKLRIPSWVPGLVIGYLNKKAIREATTWVKRESELQY 924
EPH HQG P++ G P +KL KK L L G Q ++ G GR + VQD++AP + VW RILD+ Y MVPK +NY+ K + I T +++ +KL FI H YFP+ +SLTWTLDY K S +DS G+W+V HP DK DW+RVYYS+++ + WVP V+ +++ KA+ +AT WVK+ SEL++
Sbjct: 32 EPHSHQGVVTPFERGDPKVKLDKKALTILTSGKPYQTQIQS------GTAGRGMVVQDIDAPTDVVWGRILDYDNYANMVPKTVESKNYKVIDHKPTKANPLEQTIYTRMKVGFPMLKLEFFIKHLYFPSENSLTWTLDYDKSSDF-NDSCGYWYVVPHP--DK-PDWTRVYYSVEVALFDWVPKFVVDFMSSKALTDATAWVKKYSELEW 232
BLAST of mRNA_H-paniculata_contig203.5250.1 vs. uniprot
Match: A0A7S4NBB6_9STRA (Hypothetical protein (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NBB6_9STRA) HSP 1 Score: 163 bits (412), Expect = 2.970e-43 Identity = 87/213 (40.85%), Postives = 127/213 (59.62%), Query Frame = 1
Query: 310 PHPHQGKTKPYKPGKPDIKLTKKQLADLNEGNLVQDMLKGETDEDGGKGGRALAVQDVNAPVEYVWDRILDFGKYNKMVPKVSHCQNYETQK----MRNGTE-IIKTDLRINVLGVKLNSFIYHTYFPALSSLTWTLDYSKKSSLADDSVGFWHVAKHPSADKNEDWSRVYYSIKLRIPSWVPGLVIGYLNKKAIREATTWVKRESELQYQGD 933
PH H+G P++PG P +KL + L G Q ++ G GR L VQDV+AP E VW RILD+ Y+ MVP+ QNYE + +N E I T +++ +KL F+ H ++P+L SLTWTLDY+KKS L DDS G+W+V HP D + +RVYYS+++ + W P V+ +++ +A+ +AT WVK+ SEL++ D
Sbjct: 43 PHAHRGVVDPFRPGDPKVKLDGGARSVLGSGRPYQAQIRS-----GSSSGRGLVVQDVDAPTECVWSRILDYDHYSDMVPRTVESQNYEVVQHKPSKKNPLERTIYTRMKVGFPMIKLEFFVRHMHYPSLRSLTWTLDYTKKSDL-DDSCGYWYVIPHP--DDPDRRTRVYYSVQVSMFDWAPKFVVDFMSSRALTDATGWVKKYSELEWAKD 247 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig203.5250.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig203.5250.1 >prot_H-paniculata_contig203.5250.1 ID=prot_H-paniculata_contig203.5250.1|Name=mRNA_H-paniculata_contig203.5250.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=333bp MVSAGRLLSSLTLAAVCVVVAKGGAGEPHPHQGKTKPYKPGKPDIKLTKKback to top mRNA from alignment at H-paniculata_contig203:16293..28379+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig203.5250.1 ID=mRNA_H-paniculata_contig203.5250.1|Name=mRNA_H-paniculata_contig203.5250.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=12087bp|location=Sequence derived from alignment at H-paniculata_contig203:16293..28379+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig203:16293..28379+ >mRNA_H-paniculata_contig203.5250.1 ID=mRNA_H-paniculata_contig203.5250.1|Name=mRNA_H-paniculata_contig203.5250.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1998bp|location=Sequence derived from alignment at H-paniculata_contig203:16293..28379+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |