mRNA_H-paniculata_contig2028.5244.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2028.5244.1 vs. uniprot
Match: A0A6H5K8X1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8X1_9PHAE) HSP 1 Score: 781 bits (2016), Expect = 5.820e-225 Identity = 1188/3940 (30.15%), Postives = 1477/3940 (37.49%), Query Frame = 2
Query: 41 LAAVRCYFRDEDPIFVRTNLKRLLEGTLVCFEKGDTVTVARRCREGENYPGGLGTVARVLPNFFYDIKYAVDGLEKDVDACFVEKTTLDTRKPRGSSPRCPYCRSFLHECTCEASSGSSVTATPEAPA-------------TTMPNEHQSXXXXXXXXXXXXXXXXXXXXXXXXXXAAIGKNAAGAVNSTAWKKASDGRPRFDIATAQEEGGGRSMGVSRQQQLGSEEMDIDSALDNDDDKSEHIHGELRGPAVPGIENTSTASRDAGLGSQKMGNKWPSFMAGEEDAGRSSDKNQYGGKSETDAPSLSTDQKIAVSAGDDGFIDQDNDEMLWTQ-------------------TGSTNGGDGXXSGDHFGQAD-------------------------RPEPRRDGLSWRPRKGDLVEVERRTMPGMNKLGGTGRVVKVNSETGTVDVRYVVEGGWERGIDPVYVTPAVLDLSEVKRPTLGRCQHCGSLRVDCRQGCEHYTAPPSRWSPSYMPFLNRTIPGARPDESRSIRNTGPTGEEGLVEGGQNQRKGRERHGQHRLPAMGDDLAIEQDK--RRRHRLREDWNEEGLQMPGSEEKREVEREGEAGDGD----------GRGNVDHDWERSGGESLDSSGDGSHGTKSDDQRRWRSRRRRKIYDESDSEHSDS-----------DVELLAVRNASR--------HDHHSRDDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEAGDAQPERDTARFLMPEGEEASRALPSDIVDPTRGMKNPVLLRRELMNLLKQLEKC-VVELEKDVPPMCRRAAQAAVAGPGRINDA----SLKSAIVGVPTRVTSVKPGGXXXXXXXXXXXXXTSLRNGDARGRRGKTQRRCGSSVAHTSNRGTSISRSALGARRXXXXXXXHH----------------------------------------------------------------GMGEGNWVLSGEAKQDTETY----IPGLDYSM-AVEPDEAE--------------------------------------------VHNTRGRSIDSSLSSCXXXXXXXXXXXLSRSRPPQWPSLSP------------------------GAAEGNRREGTGCEDDYSIRWKGGDDVRW------------------NSSSRLAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRTARRGL----------------------LTDG----------------------KRRERRHDITCTSSFNASSGRGARSSRDGGGG-------VDV--------------GGELGLALNLLPQRMADLEDLARE-GLDYEAKALAGECCNIMAVVTAKLRALAISLCSSSSS--------------------------PSAAIARIHRSRLCLASAK--RHVRRLAAAAAPATPNSSNYG-DDYEDDGTLGTTTEGLSSSSPGLSLVHVAALSEKLQRDSHRVSSSNLPPPGSRPAD---ISVGSAALIGACTAFHMHLLEWIRITDKGEDRGTDGGEVVDTVAESSTTDAFPGGFMRGGNGGVLGSYS--LLDFARRLLLDLMCLFEAQ---SATRLGSTPAPAAVSPRD---LARDPWAQVWLATMDALDGVGDATVPVRPAAAV-RVHGLARPLIGFWGVFFGIVSG-------LNCTSRQDGGGFGSDSAGGWTSWKGDLSSELVWGALVYAIRLRVLREGWDDGGEEDGVVPSNGGNGDSGHRDSDQQSVPLDAQGVGGXXXXXXXXXXXXXXARRSRRKETSKALWQCVRLLLAASPFSEEFAVGPAGQISSAVAATAQSTKXXXXXXXXVALSQSLGDRYGSLSPTAAV-----TTNAPSPVVLAAKESFSSPGMVARVMLERVLVLARIYPAEAGPHGVVEKLWEGAQRVSIALCVLPGSAGSDVGGGMAVDGRTEADGCCPQADERRENSRLRSARRLGQWSTPSQGADVFVSSSGEDGHGRLLYSTAKAWCLPANRNCCLPRAALEGTSAVADDGGPRRGFREGEHEGDYGALCSLVSLLTQEHVMRLPDGLKRRRLANMFLRAKY--------------------------SSRKPSP-----GERSTEEAD-DEVKALAPSRVLLCIALGLARAG--LWADAAKGLLKAAAVRPRNISADTPRDRSIVLIAPAASALCLALPHMSGGG-------GDDVRATLFGVLAGCMRDAVDLLANVINGAGRLGQAV--------------------------------------------------------------RRERVV---------------------------------------------------------------------------------------------RPRAAVGLAASCILLALSHLGPRAQRPPTWSTAQDDGSAMSAAEAFVEVLGRALEKR----FIEHLGRPTLTVILFALLNCWPPSANELARPLTTLTSSSPSEE-------------QRGYAMGWWKSEQLDSFPHRAVAGGAATRAAEALVADDSVRTVVASTSTSTPPAPSPSLGPSIMLSPPSSLGNNVHDGIPTISGSGNLGRLQGGGGGDQPECSEQNDMEDEYGSWDHFLGDPGLEALLSGVTSRAINGTTQSEYTQXXXXXXXXXXXXXXXXXXXXXAEIAMATAMEEAAAVAKRQKEKEETWRSLAAGARAFVLPHLPEILKRAWTSARYAQGDPSSSTGSLQAVAPSHVTPGGGGVGVHGGRVGFAGGSRYTSSNITTPVAMTMSFS-ARNVGAAVALANLE-VDAGVVLKVHASAALLALRGSMYGVNGDD----------KSYSDNRGDNGHHFDYSSVREKYLELYRTALNPLVPQQRLLAPAFFCLVLDSACEGSKNSGVGGGSSPDIGNTVPQEGDTHHGSSRRDDREQNFQWWLGPSPADVRPPRLLLRETLRGREWEVLQLWMQAALDPIAFPVP------PRRGGGNRDHRGRRYSSRGDWNRTGGGRGSGDGAGTDEPSDIVRERFEAFTHCIAKAFGSGVGEKWGNRAAGDCDGGGVQRTRPNADDVTGVFEKRLTRFDLGQRAVLSRDEDKVLERILDIQSAVAHCGGLWAAALVITGPASMPEADRIRIKGSVVKLMHAAVKSLKRFLPEVFPRDHTHVVSTGTSTGGQ---DDAGGAGSAAPLRYGSTFRRLYGHAAYSLVAVLSRMCAG-ALKGPPLRDLVETCFEEIACRPVSSSIGGGNXXXXXXXXXXRAESRGAGGKGRGKPNPELNAFAVMHASDLLQCFSEMPMTLVPYSEWIKNMNDHAING-DLSWGSKIRHA------AAPTPHPLIFSLAAGLRGDLQYPSSPYSHVCLSSASRRRRSAQAAISISSATTTAEG--------DPFLELVSLAALAP-PPRPPSAAVAKRQRLARMRLEMLGDRKLRMARFLLEAA--------------------------GTSGSAARNGAQGEGKGEHQRVLFSAKSVNKTRRLLVLLVETFGSGQRRRWRQRSRQEGDAVEGGNGNKRRDLSGPAPEATTANHSSTAVWNDGLPANPVLPTPQLEMRRDILALVRPVYSLLGQALLGEPGPARRLERQALAAAVALVTAALEATRPQPET---------------------------GLVRRVRAPNDGRTFAAVLPEAGGTPSPVLPDERRVAECFAQVVILAVATKLDTFLDAIGGGDQDVEEFSVLQLRALADFGPREIELERLLRGLGAWDVHGDA--QGWPHHAPXXXXXXXXXXXXXXXXATATTVNVVRGAHEKAAGEDSEASDTPLSSLLAEADEMVKAFEYELAPSAQRNLDGEEERPRGNRWWQRVQDALLPRIEACR 9841
+AAV+CY RD DP+F+R+NL +L GTL GDTV VARRCR GEN GG G V VLP +FYD+KY V G+E VDACFVEK L + K RG + RC C SF ECTC+A S +A +++P+ + A K A +S K+ RP A GGG S GV + G +++ A DD S + G + +E+ R+ G G+ AGE G+ P +++ D DE +WT+ G+ + G SG+H AD + RD WRP+K +LVEV RRT PGMNKLGGT RVVKV+ TG VDVRYVVEGGWER IDPVYV PA LD++E KR T GRC HCGSLRVDC+Q CE++T+ P R + + + R+ P S + R + Q + D D RRRH L +DW+EEG +PG G R G SS D GT D RR++ D SD + S D++LL VR R D S+ XXXXXXXXXXXXXXXX A FL EG+E LP DI DPTRG+K+P +L+ L LLKQ+E V +LE+DV CR A PG + A SL++ + + R V+ + D G G R +A S R + ++AL R G EG V + + GLDY M AV D A+ XXXXXX +R R S++P G + G RR+G G + + GG R + +LA+ + RG L DG R R +CT S S + A DG G VD GGE+ AL +LPQRMAD+E+LAR GL EA+ALA +CC MAVV AKLR + SS ++ PS++ SA VRRLA A AP DD E D PGLSL AA+ RPA+ + GS+AL GAC A H+HLL+W+ + E+ L+DFARR+LLDL+ LFE + R G A L++DP A++ A MD LDG G + PAA RV GL PL+GFWG+FF +VSG N +S +GS + G L SELVW ALV+A+RL V R + P G GG R K+ S+ALW+CVRLLLAASPF+EEF XXXXXXXX + SPV AA E ++PGMVARV+LERVLVLAR++P E P GVVE+LW G QR+S LC +AA GT RG + +EHV+R+P GLKR +LAN +AKY S+ SP GE S+ D D+V ALAP RVLL IALG+A A + A AA+ L+KAAA+RPR+++AD PRDRSI L+APAA+ALCLALP G G + VRATL+GVLAGCM A+DL+A V++GA RLG + RE V RPRA +GL SCIL+AL HLGP ++ F+E LGR T L ++ L+ ++ + P +RGYAMG W+ E D R ++ RA E PT+ G G GG +QPE EDE+GS + D L+ LL G A XXXXXXXXXXXXXXXXXXXXX E E RSLA GAR VLPHL ILK T+ARYAQG S+S S S A G + + + VDAG VL++HASAAL+AL GS G G S + + +KYLE+YR NPL+PQQRLLA AFFCLVL+ S G GS+ +G ++ P PA PP L ETLRGREWE+L LW+QAALDP+AFP PR GGG GRR S EPSDIV++RFE FT + AF G + G+ G Q+ +P D+ GVFEKR+ RF+ Q LS DE +VLER+LD+QS VAHCG L+ A+V GP +PE DR RIK VVKL H A+K+L+RFLPEVFPR+ + G +GG G P RYG FRRLYGHAAYSL A L RMC G LKG PL +LVE FE IACR ++G XXXXXXXXXX P+ EL A AV H DLLQC SE +T+ P + WIKN+ND AI+G D + S HA A + PL+ SLA+GLRGDL YP P RR R A TT G D F EL + AALAP P R P+ R+ L R EMLGDRKLR+ARFLLEAA GT R Q + K A SV KT RLL LL G R+ GD +G G + + P L P L +++D+L L+RPVY+LLG+A LGE G ARRL R+ LA A AL A L+ T P G AP G A AG P ERR ECFA+ V+LAV+T L + ++ G LAD GPRE +LERLL LGAW+ G +GWPH APXXXXXXXXXXXXXX A + D PL LL +A+++ A L +A R G R +R+ AL PRI+ACR
Sbjct: 1 MAAVKCYLRDGDPLFIRSNLSKLEAGTLTRLAVGDTVRVARRCR-GENKEGGQGIVLAVLPEYFYDVKY-VGGVEYGVDACFVEKIKLGSTKRRGGTSRCGRCNSFESECTCQAPSRGGRSAXXXXXXXXXXXXXXXXXXMSSLPSYLRGGGGSPSGSPQSETAVPRAGFRRERERAHPLKRPRPAGSSQEAKEREGARPDPPRKRA---GGGVS-GVPPRV-WGXXXVELKKAAV--DDSSSSLQSGKGGQGMD-VEDDRLPRREVSHG-DTFGSGAVQGGAGESATAXXXXXXXAEGREGDQTP-----PQLSKRCDKDSGXXXXXDEAIWTEHAQGSHGGEIPSHGPDAAANGTLHRGGVVDSGNHD-PADGXXXXXXXXXXXXXXXXXXXXXXXFQASSSRD--VWRPQKKELVEVARRTAPGMNKLGGTARVVKVDPATGLVDVRYVVEGGWERNIDPVYVRPATLDMNE-KRATFGRCVHCGSLRVDCQQECEYFTSRP-RATQQGLYLMERSEEDGGPGGSSLGKXXXXXXXXXXXXXXXXXXXXRSQASQEEGGDVDDRERGHADSQTRRRH-LPQDWDEEGEPVPGXXXXXXXXXXXXXXXXXXXXXXXXXXVGGITAPQQRRRIGLRLALSSSDSDEGTADD----AGVPNRRRLGDGSDGSDAGSQYDXXXXXXXSDIDLLYVRPGVRGHGGTLRPRDRRSQRSRGRDSSVGGGSVTDQESGLEQXXXXXXXXXXXXXXXXXXXXXXXXXVGGA-FLQAEGDEDE--LPPDIRDPTRGVKDPGVLQARLEELLKQMETGDVTKLEEDVAAACRCVESATA--PGASSTATLVSSLRADLQDLLDRRDQVRQTSDVAENIYRRLRRLARSWH-DGSGGEGVWLR-----LASLSQRLEDLRKAALTGIRDCESSGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGWGRREGRQVEAXXXXXXXXXXXXRQVAGLDYDMPAVAVDSADDSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGRSGXXXXXXXARRRGASCSSVNPRHXXXXXXXXXXXXXXXXRXXXDRGKSRG-RRQGAGNDGLFGPSSTGGACARQPRMFPINGRALQRELYDRTLARQLARGGRPVIRAGGGVAAKNGGRPGSAAAGQAEGERSGVWEREERRRESVGRGXXXXXXXXXXXXXXXXXXXPLPALVDGVGAAANPRRAALSFDTLFAVRAADRARCRRTSCTGSVKTCSAKTAAVGMDGSSGRMLEASGVDPCFVARDTTCGSDGDGGEIARALGMLPQRMADVEELARSHGLQDEAEALAEDCCKTMAVVGAKLRRTLLHPHSSKAAASPSSLEGAGGGGAGTVGCGQPQHLRPSSSXXXXXXXXCYSRSAPVAAAVRRLAEACAPGQGGGXXXXXDDGERD-------------FPGLSLTAAAAV---------------------RPAENPGLGGGSSALFGACAALHVHLLDWLSLMTAVEEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGFLVDFARRILLDLLFLFEKRRRLGPARSGRRRNQAGRQQEQEALLSKDPSAELLCAVMDTLDGSGGLSGAPGPAATTTRVPGLVEPLVGFWGIFFDVVSGGPSAFLSQNASSXXXXXXYGSRRSRG-------LPSELVWDALVHALRLAVARRXXXXXXXXXXXXATG----------------PAQGAGSGGRSAATAAMAATGQV----RHKDESRALWECVRLLLAASPFAEEFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSAARASPVTAAAAECAANPGMVARVLLERVLVLARVHPPEVDPQGVVERLWVGVQRISGTLCATAXXXXXXXXXXXXXXXXXXX-------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAASTGT----------RGTK------------------LKEHVLRVPKGLKRNKLANNLRKAKYRPSLLLAPRTLLHFQRNMQPLSPPPSSALFASPPSLPGGESSSVRWDEDDVLALAPWRVLLGIALGVAPADAKMAAVAAEMLVKAAAIRPRDVAADAPRDRSIALVAPAAAALCLALPRSGGSGXXXXXXSSNSVRATLYGVLAGCMGSALDLMAMVLDGASRLGHVIVGGWCPTVQLTAALAQRGGEDAQTVVVARGKNRALQRWIAARKFAARKIRKKAHPQREVDREGRETAVKAAAKKKAREGDLSFGTFNGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGLERPRAVIGLTVSCILVALRHLGPLSEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAFVEVLGRALDTRFSKHL------GSSALSMVMSAVLHCWPPXXXXXADGVLETEGGRRGYAMGLWRLEP-DGSSSRGGGSSSSNRAGE-----------------------------------------------PTVDCGGEARVAAGAGGANQPEQGADI-FEDEFGS---LVYDAELQDLLDGGAGGADPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE---------------------EFRRSLADGARTHVLPHLHAILKTTHTAARYAQGSASASVLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSGAATAGPSPSSTDSSIVDAGTVLELHASAALVALNGSDSGGFGGGGRSXXXXXXXXSQAXXXXXXXXXXGLTGACDKYLEVYRMGHNPLMPQQRLLAAAFFCLVLEGG-----GSDSGSGSNAHVGRSLAH-----------------------PCPA---PPLL---ETLRGREWEILHLWVQAALDPLAFPASRPRDRRPRGGGG-----GRRSSK--------------------EPSDIVKDRFEGFTRYLCAAFRPAGGGRPGD--------GQQQQLKPLDADLAGVFEKRVVRFEPAQLTALSHDETQVLERVLDLQSVVAHCGTLYETAMVRAGPGLLPEKDRKRIKDRVVKLAHKAIKTLRRFLPEVFPREQQGYRARGARXXXXXXXSSSGGTGVMPPARYGLAFRRLYGHAAYSLSAFLMRMCGGRVLKGAPLCELVEAMFEGIACRGPGGAVGXXXXXXXXXXXXXXXXXXXR----ESVPHAELRALAVTHLPDLLQCLSETTLTMPPVTGWIKNINDQAIHGGDQTPPSDDPHANPNASAANLSFTPLLASLASGLRGDLAYPCCP----------RRGR----------AVTTGAGGGGRGEGDDAFGELATAAALAPLPGRDPAVRSRLREGL---RQEMLGDRKLRVARFLLEAAVAGXXXXXXXXXXXXXXXXXXXXVVVGTELQRVRQQLQQQQK--------MALSVRKTGRLLALLTGVLGR----------RRLGDDDDGDGGXXXXXXXXXXXXXXXXXXAGPPWPSPVSRQQPPLGRPPLSVKKDVLVLIRPVYALLGEAFLGEKGLARRLTREILAVAAALAVAGLDHTLPATAATIXXXXXXXXXXXXXXXXXXXXXXHGQGEAAGAMAPGRGAVDAV---RAGVESPPAAAIERRAVECFAEAVVLAVSTSLGAVVASVAGXXXXXXXXXXXX--GLADLGPRESDLERLLVSLGAWESRGGGGGRGWPHSAPXXXXXXXXXXXXXXGGQDAVVEEI----------------DMPLPELLDDAEKLSAA----LRSAATRGGAGGTSRA----IVRRLDGALAPRIKACR 3562
BLAST of mRNA_H-paniculata_contig2028.5244.1 vs. uniprot
Match: D7G3E3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3E3_ECTSI) HSP 1 Score: 554 bits (1427), Expect = 1.100e-161 Identity = 597/1636 (36.49%), Postives = 733/1636 (44.80%), Query Frame = 2
Query: 5258 RLANMFLRAKYSSRKPSP---GERSTEEAD-DEVKALAPSRVLLCIALGLARAG--LWADAAKGLLKAAAVRPRNISADTPRDRSIVLIAPAASALCLALPHMSGGG-------GDDVRATLFGVLAGCMRDAVDLLANVINGAGRLGQAVRRERVVRPRAAVGLAASCILLALSHLGPRAQRP-PTWSTAQDDGSAMSA----------------AEAFVEVLGRALEKRFIEHLGRPTLTVILFALLNCWPPSANELARPLTTLTSSSPSEEQRGYAMGWWKSEQLDSFPHRAVAGGAA-TRAAEALVADDSVRTVVASTSTSTPPAPSPSLGPSIMLSPPSSLGNNVHDGIPTISGSGNLGRLQGGGGGDQPECSEQNDMEDEYGSWDHFLGDPGLEALLSGVTSRAINGTTQSEYTQXXXXXXXXXXXXXXXXXXXXXAEIAMATAMEEAAAVAKRQKEKEETWRSLAAGARAFVLPHLPEILKRAWTSARYAQGDPSSSTGSLQAVAPSHVTPGGGGVGVHGGRVGFAGGSRYTSSNITTPVAMTMSFSARNV-----GAAVALANLE-VDAGVVLKVHASAALLALRGS-MYGVNGDDKSYS----------------DNRGDNGHHFDYSSVREKYLELYRTALNPLVPQQRLLAPAFFCLVLDSACEGSKNSGVGGGSSPDIGNTVPQEGDTHHGSSRRDDREQNFQWWLGPSPADVRPPRLLLRETLRGREWEVLQLWMQAALDPIAFPVPPRRGGGNRDHRGRRYSSRGDWNRTGGGRGSGDGAGTDEPSDIVRERFEAFTHCIAKAFGSGVGEKWGNRAAGDCDGGGVQRTRPNADDVTGVFEKRLTRFDLGQRAVLSRDEDKVLERILDIQSAVAHCGGLWAAALVITGPASMPEADRIRIKGSVVKLMHAAVKSLKRFLPEVFPRDHTHVVSTGTSTGG---QDDAGGAGSAAPLRYGSTFRRLYGHAAYSLVAVLSRMCAG-ALKGPPLRDLVETCFEEIACRPVSSSIGGGNXXXXXXXXXXRAESRGAGGKGRGK---PNPELNAFAVMHASDLLQCFSEMPMTLVPYSEWIKNMNDHAING-------DLSWGSKIRHAAAPTPHPLIFSLAAGLRGDLQYPSSPYSHVCLSSASRRRRSAQAAISISSATTTAEGDPFLELVSLAALAP-PPRPPSAAVAKRQRLARMRLEMLGDRKLRMARFLLEAAGTSGSAARNGAQGEGKG----------EHQRV-------LFSAKSVNKTRRLLVLLVETFGSGQRRRWRQRSRQEGDAVEGGNGNKRRDLSGPAPEATTANHSSTAVWNDGLPANPVLPTPQLEMRRDILALVRPVYSLLGQALLGEPGPARRLERQALAAAVALVTAALEATRPQPETGLVRRVRAP------------NDGRTFAAVLPEAG-------GTPSPVLPD-ERRVAECFAQVVILAVATKLDTFLDAIGGGDQDVEEFSVLQLRALADFGPREIELERLLRGLGAWDVHGDAQ--GWPHHAPXXXXXXXXXXXXXXXXATATTVNVVRGAHEKAAGEDSEASDTPLSSLLAEADEMVKAFEYELAPSAQRNLDGEEERPRGNRWWQRVQDALLPRIEACR 9841
R A+ + + +S +PS GE S+ D D+V ALAP RVLL IALG+A A + A AA+ L+KAAAVRPR+++ D PRDRSI L+APAA G + VRATL+GVLAGCM A+DL+A V++GA RLG V +++ RPRA +GL SCIL+AL HLGP A+ P P +T Q +A A AFVEVLGRAL+ RF +HLG L++++ A+L+CWPP + +RGYAMG W+ E S RA E PS+ G N QPE EDE+GS + D L+ LL G A N S XXXXXXXXXXXXXXXXXXXXX E K +EE RSLA GAR VLPHL ILK T+ARYAQ S+S S G + + + VDAG VL++HASAAL+AL GS G G +S S G NG V +KYLE++R NPL+PQQRLLA AFFCLVL+ + D+G ++ P PA PP L E LRG+EWE+L LW+QAALDP+AFP R G+R RG R + EPSDIV++R GD G Q+ +P D+ GVFEKR+ RF+ Q LS DE + LER+LD+QS VAHCG L+ A+V GP +PE DR RIK VVKL H A+K+L+RFLPEVFPR+ + G + G G P RYGS FRRLYGHAAYSL A L RMC G LKG PL +LVE FE IACR + ++GG XXXXXXXXXX + P+ EL A AV H DLLQC SE +T+ P + WIKN+NDHAI+G D + + AA + PL+ SLA+GLRGD YP P RR R D F +L + AALAP P R P+ R+ L R EMLGDRKLR+ARFLLEAA E QRV A SV+KT RLL LL G P L +++D+L L+RPVY+LLG+ALLGE G ARRL R+ LA A AL A L+ T P + G A P G G SP ERR ECFA+ V+LAV+T L + ++ LAD GP E +LERLL LGAW+ G GWPH XXXXXXXXXXXXXXXX + V E D PL LL +A+++ A G R R+ AL+PRI+ACR
Sbjct: 6 RRASSGISSPTTSERPSTVPGGESSSVRWDEDDVLALAPWRVLLGIALGVAPADVKMAAVAAEMLVKAAAVRPRDVAGDAPRDRSIALVAPAAXXXXXXXXRSDGXXXXXXXXXSNSVRATLYGVLAGCMGSALDLMAMVLDGASRLGHVVSADKLERPRAVIGLTVSCILVALRHLGPLAEPPLPPANTPQAAAVGSNAXXXXXXXXXXXXXXXXARAFVEVLGRALDTRFSKHLGSSALSMVMSAVLHCWPPXXXXXXXXDGVAETEGG---RRGYAMGLWRLEPDGSSSRDGXXXXXXXNRAGE----------------------------PSV------DCGEEARVAXXXXXXXAN-----------QPEQGTDI-FEDEFGS---LVYDAELQGLLDGGAGGA-NPXQPSAQXXXXXXXXXXXXXXXXXXXXXXXIE-----------------KGREEVRRSLADGARTHVLPHLHAILKTTHTAARYAQASASASVLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHSTSSTDFSIVDAGTVLELHASAALVALNGSDSVGFGGGGRSGSXXXXXXXQXXXXXXXXSGSGLNG-------VCDKYLEMHRMGHNPLMPQQRLLAAAFFCLVLEGDXXXXXXXXXXXXGNTDVGRSLAH-----------------------PCPA---PPLL---EALRGKEWEILHLWVQAALDPLAFPASRR---GDRRPRGGXXXXR----------------SSKEPSDIVKDR------------------------PGD---GQQQQLKPLDADLAGVFEKRVVRFEPAQLTALSHDETQALERVLDLQSVVAHCGTLYETAMVRAGPGLLPEKDRKRIKDRVVKLAHKAIKTLRRFLPEVFPREQQGYRARGARXXXXXRSSSSAGEGVLPPARYGSAFRRLYGHAAYSLAAFLMRMCGGRVLKGAPLCELVEAMFESIACRGPADAVGGXXXXXXXXXXXXXXXXXXXXXXXXXRVSVPHAELRALAVTHLPDLLQCLSETTLTMPPVTGWIKNINDHAIHGGDQTPRSDDTRANANASAANLSFTPLLASLASGLRGDPAYPCCP----------RRGRGVTTGAXXXXXXXXXXDDAFGDLAAAAALAPLPGRDPAVRSRLREGL---RQEMLGDRKLRVARFLLEAAVVGXXXXXXXXXXXXXXXXXXXXXXGTELQRVRXXXXXXXXMALSVSKTGRLLALLAGVLGRXXXXXXXXXXXXXXXXXX------------XXXXXXXXXXXXXXXXXXXXXXXXXXGRPPLSVKKDVLVLIRPVYALLGEALLGEKGLARRLTREILAVASALAVAGLDHTLPATAATITXXXXXXXXXXXXXXXXXYGQGEATGATAPGRGAVDVVGAGVESPAAAAIERRAVECFAEAVVLAVSTSLGAVVASVAXXXXXXXXXXXXXX-GLADLGPCESDLERLLVSLGAWESRGGXXXXGWPHXXXXXXXXXXXXXXXXXXXXXXXGQDAVV-----------EDIDMPLPELLDDAEKLSAAVRSAATKGGAGGASGAIVR--------RLDGALVPRIKACR 1444
BLAST of mRNA_H-paniculata_contig2028.5244.1 vs. uniprot
Match: D8LL32_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL32_ECTSI) HSP 1 Score: 251 bits (641), Expect = 6.640e-63 Identity = 455/1523 (29.88%), Postives = 578/1523 (37.95%), Query Frame = 2
Query: 41 LAAVRCYFRDEDPIFVRTNLKRLLEGTLVCFEKGDTVTVARRCREGENYPGGLGTVARVLPNFFYDIKYAVDGLEKDVDACFVEKTTLDTRKPRGSSPRCPYCRSFLHECTCEASSGSSVTATPEAPATTMPNEHQSXXXXXXXXXXXXXXXXXXXXXXXXXXAAIG----------------KNAAGAVNSTAWKKASDGRPRFDIATAQEEGG---------GRSMGV------------SRQQQLGSEEMDIDSALDNDDDKSEHIHGELRGP-AVPGI--ENTSTASRDAGLGSQ---KMGNKWPSFMAGEEDAGRSSDKNQYGGKSETDAPSLSTDQKIAVSAGDDGFIDQDNDEMLWTQTGSTN-GGDGXXSGDHFGQADRPEPRRDGLSWRPRKGDLVEVERRTMPGMNKLGGTGRVVKVNSETGTVDVRYVVEGGWERGIDPVYVTPAVLDLSEVKRPTLGRCQHCGSLRVDCRQGCEHYTAPPSRWSPSYMPFLNRTIPGARPDESRSIRNTGPTGEEGLVEGGQNQRKGRERHGQHRLPAMGDDLAIEQDK--RRRHRLREDWNEEGLQMPGSEEKREV---------------------------------EREGEAGDGDGRGNVDHDWERSGGESLDSSGDGSHGTKSDDQRRWRSRRRRKIYDESDSEHSDSDVELLAVRNASRHDH---HSRDDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEAGDAQPERDTA----RFLMPEGEEASRALPSDIVDPTRGMKNPVLLRRELMNLLKQLEKC-VVELEKDVPPMCRRAAQAAVAGPGRINDASLKSAIVG-----VPTRVTSVKPGGXXXXXXXXXXXXXTSLRNGDAR--------------------------------GRRGKTQRRCGSSVAHTSNRGTSISRSALGARRXXXXXXXHHGMGEGNWVLSGEAKQDTETYIPGLDYSMAVEPDEAEVHNTRGRSIDSSLSSCXXXXXXXXXXXLSRSRPPQWPSLSPGAAEGNRREGTGCEDDYSIRWKGGDDVRWNSSSRLAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRTARRGLLTDGKRRERRHDITCTSSFNASSGRGARSS--------------RDGGGGVDV-GGELGLALNLLPQRMADLEDLARE-GL--DYEAKALAGECCNIMAVVTAKLRALAISLCS--SSSSPSAAIARIHR----------SRLCLASAKRH----------------VRRLAAAAAPATPNSSNYGDDYEDDGTLGTTTEGLSSSSPGLSLVHVAALSEKLQRDSHRVSSSNLPPPGSRPADISVGSAALIGACTAFHMHLLEWIRITDKGEDRGTDGGEVVDTVAESSTTDAFPGGFMRGGNGGVLGSYS--LLDFARRLLLDLMCLFEAQ---SATRLGSTPAPAAVSPRD---LARDPWAQVWLATMDALDGVGDATVPVRPAAAVRVHGL-ARPLI 4072
+AAVRCY RD DP+F+R+NL +L GTL GDTV VARRCR GEN GG G V VLP +FYD+KY V G+E VDACFVEK L + K RG + RC C SF ECTC+A S +A XXX I K A +S K+ + RP D Q GG G GV S Q G + MD++ D+ + + HG+ G AVPG E+ + A+ + G Q ++ ++ G +D + G + + PS D + G +D N + + G G DG + +P RD WRPRK +LVEV RR PGMNKLGGT RVVKV+ TG VDVR+VVEGGWER IDPVYV PA LD++E KR T GRC HCGSLRVDC+Q CE++T+ P R+ GR R Q + D D RRRH L +DW+EEG +PGS R + G G D D E L DGS+ YD+ +H DSD++LL V+ R H RD S D FL EG+E LP DI DPTRG+K+P +L+ L LLKQ+E V +LE+DV CR A PG + A+L S++ + R GG XXXXXXXXXX GRRG ++ + R +++ XXXXXXX G+D M A + D +L+ L+R PP + AA R G+ G VR R XXXXXXXXXXXXXXXXXX + R L D + T N SSGR +S DGGGG GGE+ AL +LPQRMAD+E+LAR GL + EA+ALA ECC MAVV AKLR + S +++SPS+ L +S+ H VRRLA A AP D E D PGLSL AA + + P P + G +AL GAC A H+HLL+W+ + E+ L+DFARR+LLDL+ LFE + R GS A L++DP A++ A MD LDG G + V A G+ AR L+
Sbjct: 1 MAAVRCYLRDGDPLFIRSNLSKLEAGTLTRLAVGDTVRVARRCR-GENKEGGQGIVLAVLPEYFYDVKY-VGGVEYGVDACFVEKIKLGSTKRRGGTSRCGTCNSFESECTCQAPSRGGRSAXXXXXXXXXXXXXXXXXXSMSSLPSYLRGGGGSPSVSPQSPKEIAVPGGAFRRGRERAHPLKRPRPAGSSQEAKEREEARP--DPPRKQAGGGVPGVPPRVWGXXXGVELKKAAVDDRSSSLQSGEGGQGMDVE---DDGLPRRKVSHGDTFGSGAVPGGAGESATAAAAEGTEGDQTPPQLSKRYDKDSGGGDDDAEAIWTEHAQGSHDREIPSHGPDAPAKGTLRRGGVVDSSNHDPVEGGVGGVGXGSDGNRRDPGEEEESQPSSSRD--VWRPRKKELVEVARRMAPGMNKLGGTARVVKVDPATGLVDVRFVVEGGWERNIDPVYVRPATLDMNE-KRATFGRCVHCGSLRVDCQQECEYFTSRPRATQQGLYLIEERSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRSRASQEEGGDIDDRERGHADSQTRRRH-LPQDWDEEGEPVPGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGRRLAVSSSGSDEGTAD-DAEVPNRRRLGDRSDGSYAGSQ--------------YDDHGHDH-DSDIDLLYVQPGVRGHGGTLHPRDRRSQRSRGRDSSGGGASDTEQDSGLEQGEEEGEGEMSVSSESGRSGGGDEGGVGGAFLQAEGDEDE--LPPDIRDPTRGVKDPGVLQARLEELLKQMEAGDVTKLEEDVAAACRCVESATA--PGATSTAALVSSLRADLQDLLDRRDQFGGEGGRRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRRG-------AAALRPAPRLNALAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVDVEMETGERAAADDKALRQLYDRTLAQ-----------QLARGGPPVIGAGGGVAAITGGRSGSAAAGQAEGERSG---VREREEGRR---------DFAGRGGXXXXXXXXXXXXXXXXXXPVLMDGVVAAANPRRAALSFDTLFAKTCSATTAAVGMNGSSGRMLEASGVDPCFVAQDTTCGSDGGGGSSGDGGEIARALGMLPQRMADVEELARSHGLQDEAEAEALAEECCETMAVVGAKLRRTLLRAHSPEAAASPSSLGXXXXXXXXXXXGGQPQHLRPSSSPHHQEPSSCYSRSGPVATAVRRLAEACAPGQGXXXXXXXDGERD-------------FPGLSLTAAAAAAVR---------------PAENPG-LGGGRSALFGACAALHVHLLDWLSLMTAVEEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGFLVDFARRVLLDLLFLFEKRRRLGPARSGSRRNQAERQQEQEALLSKDPSAELLCAVMDTLDGSGASPVTAAAAECAAAPGMVARVLL 1433
BLAST of mRNA_H-paniculata_contig2028.5244.1 vs. uniprot
Match: H3GEQ2_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GEQ2_PHYRM) HSP 1 Score: 58.2 bits (139), Expect = 2.640e-5 Identity = 36/86 (41.86%), Postives = 52/86 (60.47%), Query Frame = 2
Query: 1112 GDLVEVERRTMPGMNKLGGTGRVVKVNSETGT--------VDVRYVVEGGWERGIDPVYVTPAVLDLSEVKRPTLGRCQHCGSLRV 1345
G LVEV+ RT PG+NKLGG GR+V+V+ ET T DVRYV+ GG+E+ I+ YV + L + R + R + G++ +
Sbjct: 86 GTLVEVDSRTWPGINKLGGPGRIVRVHRETETDEQSEDIFYDVRYVL-GGFEKHIESEYVHSSALLDRQSNRVPVERELYSGTVEL 170
BLAST of mRNA_H-paniculata_contig2028.5244.1 vs. uniprot
Match: K3W7C4_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W7C4_GLOUD) HSP 1 Score: 55.8 bits (133), Expect = 5.300e-5 Identity = 32/59 (54.24%), Postives = 39/59 (66.10%), Query Frame = 2
Query: 1112 GDLVEVERRTMPGMNKLGGTGRVVKVNSETGT-------VDVRYVVEGGWERGIDPVYV 1267
GDLVEVE RT PG+NK GG+GR+V V+ E DVRYV+ GG+ER I+ YV
Sbjct: 57 GDLVEVESRTWPGINKPGGSGRIVNVHREANANGEEKIFYDVRYVL-GGFERRIESEYV 114 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2028.5244.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2028.5244.1 >prot_H-paniculata_contig2028.5244.1 ID=prot_H-paniculata_contig2028.5244.1|Name=mRNA_H-paniculata_contig2028.5244.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=3155bp MPNEHQSPSEPQSSPPSSSSKPPSQPRSLKRPRAAIGKNAAGAVNSTAWKback to top mRNA from alignment at H-paniculata_contig2028:1894..19834- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2028.5244.1 ID=mRNA_H-paniculata_contig2028.5244.1|Name=mRNA_H-paniculata_contig2028.5244.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=17941bp|location=Sequence derived from alignment at H-paniculata_contig2028:1894..19834- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2028:1894..19834- >mRNA_H-paniculata_contig2028.5244.1 ID=mRNA_H-paniculata_contig2028.5244.1|Name=mRNA_H-paniculata_contig2028.5244.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=18930bp|location=Sequence derived from alignment at H-paniculata_contig2028:1894..19834- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |