mRNA_H-paniculata_contig2025.5235.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2025.5235.1
Unique NamemRNA_H-paniculata_contig2025.5235.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig2025.5235.1 vs. uniprot
Match: A0A6H5LKJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LKJ8_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 3.060e-15
Identity = 257/863 (29.78%), Postives = 345/863 (39.98%), Query Frame = 2
Query:  737 KRSKKTEATVLWSPGKRGREGPSVVGDGKGDTGIGGSINGNSSGLKRYGVAGSTRDVGGRSLASLARAFKERHGEDLRLDEEDDTEETXXXXEPAMSTRRIKRDRSRSGDHTTVAAAATAATMSPAKLAAEIQRARARAREERFGGGSQLR----------PAKGLR-------------------VASLPEKGASGGMAKVQAMAATAAIIASNRSSTEVE----LFGTTVPKSSESSTAPDIANASSTSSAVPLAVVPAAVRISPTGGAMTNVPVPSVHSVSQXXXXXXXXXXXXXXXXKQVSALETVGAEKSSEKDTPASSVPATQRTTSGAGSTSIQTPAVAKKSWPRQHSISF---------------------------NSHQTPKTAPKVLTLRLRLRDDAPAE---PKPQPPEPTV--DGGVEESKGFDPXXXXXXXXXXXXXXXXXXXXXXASAVVSTAASHSTAAYPLSTG---------------------------GGSVPVPVATGRAPLCPGVSATNTRGSTP---SRPRT------GFWGPSFGIEAVGSASVGGPAAAVVRVNPSTPPAP-----NPWIISPDAPTFAKNQGRPLSRS-SSHSSPSTG-----------------------ISSTRSGESAASYPARAVPENARTAATDQVGHGVGSGETEGAEVGGKEVSHGDSGTADGAGI-PGHLSKKQGSAFLAGSVGGPRCTQP---AGVATGLSRQEDGLGGQGQEHPAQYVARLLDAQQRNTEQHNTTRQRDSTAAGQIMGSAGSLAAESSRGNEAVVGTKRGERARVGG-ILQGVRVGGGAKELLERLKREREESLELERKLTQALLDL 2920
            K++K  E  VLWSPGK   +GP    + +     GG  NG               DV  ++L+ LA+ FKER+GE++  D  DD ++          T + K  R   G          A +MSPA+LAAE Q+ARARARE                    PA   R                   ++ +P   A+GG          AA+  ++  + + +    +  T  PK S  +  P      S++ + P AV P A   +P G      P+ + ++ +                   V AL T  AEK    D  A+S     +T S A + +IQ  A+     P                                  +S   P T  K+ TLRLRLR D  A+   P P  P P     GG EE K F+P    XXXXXXXXXXXXXXXXX  +A VS+  S  +     STG                               P P+AT   P     +A  +R S P   S PR       G WGPSFGI        G PA A      S+P        NPWI+SP++PTF +N+GRPL+++    S P+ G                        S+TRS   AAS     V  ++R+++      G G G   G   G     +G   T   AG  P   S + G+     +      T P   AG + G++ Q     GQ           LL  ++             S A   + GSA   AAE++ G +A      G  A  GG ++ GVR+GG A ELLERLKREREESL+ ERKLTQAL+DL
Sbjct:   42 KKAKTGEPGVLWSPGKG--KGP----EDRASLDTGGGRNG---------------DV--QNLSVLAKNFKERYGEEV--DAPDDDDDGMTTGSSVFETPKRK-GRLSGGAKPRTPVEEAARSMSPARLAAEAQKARARAREXXXXXXXXXXXXSFSKPPSSPAPSARPFPVGEPPDAPLGAPPPAAMSKVPMNRAAGGHGDKNRKGTNAAVTTTSSQAQQPQGGKGIASTAAPKDSTPANGPG----GSSNGSAPTAVSPMA---APKGATS---PISATNAAAA------------------VPALVTPDAEK---VDASAAS-----KTGSRAAAITIQAEAIPMDETPAAXXXXXXXXXXXXXXXXXXXXXXXXVKKVLTLPSSQSPPSTGGKIHTLRLRLRTDLVADSKQPAPAAPSPATAAGGGAEERKSFEPPTPPXXXXXXXXXXXXXXXXXKKAATVSSVGSKPSPVAAPSTGIKKPSVASISTVASAAPAXXXXXXXXXXXXAPAPLATATTP-----TAVASRLSIPPEGSSPRNLALTLQGSWGPSFGIP-------GAPAGAPPPTPASSPDVAAANKTNPWILSPESPTFGRNRGRPLAQAFPKPSQPTRGSXXXXXXXXXXXXXXXXXRAAGLASATRSAGEAAS-----VQPDSRSSSG-----GCGDG---GIREGRALRGNGTPATPRPAGTTPCRASPQGGTRGADVANSSSPLTHPLPRAGASAGMNAQPPLSYGQS--------GGLLPPERAXXXXXXXXXXXXSLACWPV-GSALDAAAETATGTDA------GAAAASGGFVVLGVRMGGKAAELLERLKREREESLDFERKLTQALMDL 802          
BLAST of mRNA_H-paniculata_contig2025.5235.1 vs. uniprot
Match: D8LQA6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQA6_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 6.710e-6
Identity = 69/181 (38.12%), Postives = 92/181 (50.83%), Query Frame = 2
Query:  659 KRASGVIDAVEG-------SAIRDFK---GGRTNSAKRSKKTEATVLWSPGKRGREGPSVVGDGKGDTGIGGSINGNSSGLKRYGVAGSTRDVGGRSLASLARAFKERHGEDLRLDEEDDTEETXXXXEPAMSTRRIKRDRSRSGDHTTVAAAATAATMSPAKLAAEIQRARARAREERFG 1171
            KRA+G  DA  G       SA+ + +   G R N  K++K  E  VLWSPGK   +GP    +G+     GG  NG               DV   +L+ LA+ FKER+GE++   ++DD +          + +R  R    +   T V  AA   +MSPA+LAAE QRARARAREERFG
Sbjct:   40 KRAAGSADAAAGVGNGNAPSAVSNAQRRAGSRAN--KKAKTGEPGVLWSPGKG--KGP----EGRASLDTGGWRNG---------------DV--HNLSVLAKDFKERYGEEVDAPDDDDDDGMTTGSSVFETPKRKGRLSGDAKPRTPVEEAAR--SMSPARLAAEAQRARARAREERFG 193          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2025.5235.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LKJ8_9PHAE3.060e-1529.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQA6_ECTSI6.710e-638.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2025contigH-paniculata_contig2025:17184..22785 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size3582
Cds size2310
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2025.5235.1prot_H-paniculata_contig2025.5235.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2025 19817..22126 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929524.058602-UTR-H-paniculata_contig2025:17183..176081622929524.058602-UTR-H-paniculata_contig2025:17183..17608Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2025 17184..17608 +
1691480897.9412913-UTR-H-paniculata_contig2025:17183..176081691480897.9412913-UTR-H-paniculata_contig2025:17183..17608Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2025 17184..17608 +
1622929524.086862-UTR-H-paniculata_contig2025:19628..198161622929524.086862-UTR-H-paniculata_contig2025:19628..19816Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2025 19629..19816 +
1691480897.9499962-UTR-H-paniculata_contig2025:19628..198161691480897.9499962-UTR-H-paniculata_contig2025:19628..19816Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2025 19629..19816 +
1622929524.1151097-UTR-H-paniculata_contig2025:22126..227851622929524.1151097-UTR-H-paniculata_contig2025:22126..22785Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2025 22127..22785 +
1691480897.968096-UTR-H-paniculata_contig2025:22126..227851691480897.968096-UTR-H-paniculata_contig2025:22126..22785Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2025 22127..22785 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929524.1007717-CDS-H-paniculata_contig2025:19816..221261622929524.1007717-CDS-H-paniculata_contig2025:19816..22126Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2025 19817..22126 +
1691480897.9590409-CDS-H-paniculata_contig2025:19816..221261691480897.9590409-CDS-H-paniculata_contig2025:19816..22126Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2025 19817..22126 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2025.5235.1

>prot_H-paniculata_contig2025.5235.1 ID=prot_H-paniculata_contig2025.5235.1|Name=mRNA_H-paniculata_contig2025.5235.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=770bp
MAAVTPRSGRQESGDKRASGVIDAVEGSAIRDFKGGRTNSAKRSKKTEAT
VLWSPGKRGREGPSVVGDGKGDTGIGGSINGNSSGLKRYGVAGSTRDVGG
RSLASLARAFKERHGEDLRLDEEDDTEETEEEDEPAMSTRRIKRDRSRSG
DHTTVAAAATAATMSPAKLAAEIQRARARAREERFGGGSQLRPAKGLRVA
SLPEKGASGGMAKVQAMAATAAIIASNRSSTEVELFGTTVPKSSESSTAP
DIANASSTSSAVPLAVVPAAVRISPTGGAMTNVPVPSVHSVSQDVPVATA
AAVAAVVPRKQVSALETVGAEKSSEKDTPASSVPATQRTTSGAGSTSIQT
PAVAKKSWPRQHSISFNSHQTPKTAPKVLTLRLRLRDDAPAEPKPQPPEP
TVDGGVEESKGFDPPNIRPDNGVEECKGFEPPNLPPASAVVSTAASHSTA
AYPLSTGGGSVPVPVATGRAPLCPGVSATNTRGSTPSRPRTGFWGPSFGI
EAVGSASVGGPAAAVVRVNPSTPPAPNPWIISPDAPTFAKNQGRPLSRSS
SHSSPSTGISSTRSGESAASYPARAVPENARTAATDQVGHGVGSGETEGA
EVGGKEVSHGDSGTADGAGIPGHLSKKQGSAFLAGSVGGPRCTQPAGVAT
GLSRQEDGLGGQGQEHPAQYVARLLDAQQRNTEQHNTTRQRDSTAAGQIM
GSAGSLAAESSRGNEAVVGTKRGERARVGGILQGVRVGGGAKELLERLKR
EREESLELERKLTQALLDL*
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mRNA from alignment at H-paniculata_contig2025:17184..22785+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2025.5235.1 ID=mRNA_H-paniculata_contig2025.5235.1|Name=mRNA_H-paniculata_contig2025.5235.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5602bp|location=Sequence derived from alignment at H-paniculata_contig2025:17184..22785+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ACGAATGAGCATGGAAAGCGTGGCGGCAAGGCGGGCAAAAAAATTGGGAG AAATGGAGCAAAAGGTTAACTTGCAAAATTGTCATGTCTGTTTGTGGGAT GGATAAATTGAATTTTTGCGTGCTGCTGACTGTGAATACACAGAGTTGTC GTGTCCTGCTACATCCGAAGCCTTACTGTTGCTCACCTGATGTACGCAAA ACTGCATCACTTCGAGTCACTGTCTACGTGACTGATCTACTAGTTGGTTC CGGTCTGGAGAAGTGTAAGAGTTGCCCACGGTATTCTTGTCGTCGAGGAT AGAACACGTTGCTTAACTGCGGCCAATCCATCTATTCTCTCAACCACCCT ATCACACAGCGCGTGGCGGAGCGGATGCAGGACACCAGGATGGCGGGCGA ACTGGGGGTGGTGGCGGCGCCAAAGGTGAAAGTTCCCTCCTTGAAGCAAA AACATCGATTGTTGAACAGTGATGTAGGAGGTGCCCACAGGACAATCAAC ATAATATGTTATAGTTGTGTGTGAACACAGTAGACAGTACGCCATGCTAG CTTACTGGATCTAGTCTTATTATACTGTGAACGCTTGGAGCAGGTCCTGA GATTGTAATCCCTGTCTAATCCCGCCTGAAAAAGCAGTCCAACACATGTT TACGAGGATGGGAAGCCACCCCTGTCCAGAGTATAGATAATATCAATGAC AGCGATATGTAGTATGGATCTGCGCTCAACGATTGCAGCGCTCGACATAT AGAATGATATTCATTTTTTTATTCCAAAATAGCCTCGGACGCTCAACGGG TCAACCGTAGTGTCAGACTTCTAACTATTCCGAAAATGATCAGTTACCAC TCGCCGGGTCAGGGCGGCGGACATCTTTGCTGGCTCGGTGATGTATGGAA TTTTTCCGATGGACTGTGCCTTGGATCCCTTACTCTCATACGTTGTGTTT AACCCGCTGCGACCGCTCGATCGAATCAAATGAATATATTACAACAATTT CATCGACTAAATACCTCCCCACAAAGCATACACCGACACCCAACAGCCAG CCCCACAAGCATGCCAAATGAAAATAGGAAGATGGGTAAGCGTGGGCACC CCGTTTCATCGGGAATTACGATATGCTGTACTGTTCCCTTCAGTGCCTGC CACAATACGGGGTAGCTTCAGATTGGCTACTGTAGCCCGAACAGGATTTT ACTCGTCCAGAGTTTTGTGTCGTGTGACAGTCTGTTTTCTGTATTGTGCT TAGTGGTCATGTACTAAAGCTGTACTTGCGTAATCTGTCTGTCCAAATCT AAATCAGTATCCGACTCTTTGCCAGTCCACTGCATATTTATCAACCGTAC TAATTCCAAGAACAGACCATAGGTTGAGCGCGTTTCCCGTTTCACCCCCC AAATATTTGCCTTTCCCCATAATATTTTTCCTTCCCCTCTCGTACCCCAC TTCTTTCAGCCATCGTCACGTACGGAACTGACACGCATATTTCTCAGGGG TCGAAGAGTTTATACAAGTGCTGTTCTTTGTTATCCACCCCAAAAAGTAT GAGCCCAGTTTTCCCTAACAAAGTGCAGTGCCAGGTATCGTTCAGTGGCG TTGTGTGGCAGTGTTTCGCGAGAAGAATTACTGGGGATAGTTGCGACTGT TGTCTAAAATAACAATGTTCTTCACATGACTGCGCGTTAGACATGTATTT TTCGCATGTCCATGTTATGAACCGGGTCGCGGTCGACCATGTGAAAACCC TTGATTCCTTATAACTCGGTTTTCTCGAGAACAGAGACACTTCACTACCG AAGGCGTACGCCCGTTTAGAGATCTTGAGATATTTCCAATATCGAAACAT CGGACTCACGAGCAAAGAAATATTCAAGAAAATCGAGGAGACAAAGCCGA GGGTTTTCACATGAACGAGCAATGCACATATCTTTTTCTCTCGACATTTG TCATAAATTGCTTTTGTGGATGATGACGTGATATTTTCCGTTTCCCCCTC GGATTCGTGGTCGGTCATGTGAAACATTGCCGATACTCTGAAAACCCTTC CAAAATAGCGTGGCGACTGTGCACACATGAACGTTTTGATATTTCCATGT GGTCTGGGTCACCCTGTTCACATTTCGATTGCAGTTTGATTTTGCCTGAC CCCTGGATACGGGCCGCCGCTGAGCCGTGTATTTTTTCACCTCGCGACGA TTAACGTTGTAAATATTAGTAACCAACTACCGTACCTTTTCTAACGTCTA GAAAGTTTTCGGAGATAACTTGAAAATGGGAACAATTCGTATTGTGCGAA ACAATGACACGCACGTAAATCACGGCAGCGCTCCACCCGGCAAACCAGAT CGATTTGTGCTCACGTAACGGTAAAGACGCAAAAATGGCAGCTCTTTCGC TGTTTTCAACGGGCCTTCTGCCAACCACCCCACATTCGTTTGCAGGTGGA AGATTGCCGGCGCGCAAGGGTGGCCGCGGCAGGGGCAGCGGCGGTAAGCG CGGCCAACAGCAGCCGAACTCTCAACGTTGGCCACCCGGTGATCCCAGAG CGGACGGAAGGCTACCCTATACACCCGGCCGTGGGCCAGGGTCCGATGCG GGGGTCACCTCAAAACTGGAAGCAGCGACAGCGATGGCAGCGGTGACCCC ACGAAGCGGTAGACAGGAGAGCGGCGATAAACGCGCGAGTGGGGTTATTG ATGCAGTTGAAGGATCGGCGATTAGAGATTTCAAGGGTGGGCGGACGAAT TCGGCGAAAAGATCCAAGAAGACAGAGGCCACCGTCCTCTGGAGTCCCGG AAAGCGGGGTAGAGAGGGGCCTTCGGTGGTTGGAGACGGCAAGGGTGACA CCGGCATTGGGGGAAGTATAAACGGCAACAGTTCAGGCTTGAAAAGATAC GGTGTAGCCGGCTCAACGCGAGATGTGGGCGGGCGTAGCCTTGCTTCACT CGCCAGGGCGTTCAAGGAACGCCACGGGGAAGACTTGCGCTTGGACGAGG AGGACGATACGGAGGAGACCGAGGAGGAGGACGAGCCTGCCATGTCCACA AGAAGGATCAAGCGCGATCGCAGTCGTAGTGGAGACCATACCACCGTAGC TGCTGCTGCCACGGCCGCAACCATGTCTCCCGCCAAGCTGGCGGCAGAGA TACAACGGGCTAGGGCGCGTGCGCGGGAAGAGCGTTTCGGTGGTGGGAGT CAGCTGCGGCCAGCAAAGGGGCTTCGCGTCGCGTCGCTACCAGAAAAAGG TGCGTCCGGTGGTATGGCTAAGGTGCAGGCGATGGCGGCGACGGCGGCGA TAATTGCTTCTAACAGATCAAGCACGGAGGTTGAACTGTTTGGTACAACA GTACCGAAGTCCAGCGAAAGCTCTACAGCACCAGACATTGCGAACGCCTC CTCCACATCTTCTGCCGTACCCCTAGCGGTGGTACCAGCAGCCGTACGAA TATCGCCCACCGGCGGTGCTATGACGAACGTGCCTGTTCCGTCGGTGCAC TCGGTGTCTCAGGATGTACCGGTGGCGACCGCCGCCGCCGTCGCAGCGGT AGTTCCTCGTAAGCAAGTCTCTGCCCTCGAAACTGTTGGTGCCGAAAAAT CGTCCGAGAAGGATACCCCGGCGAGTAGCGTACCTGCAACACAACGGACC ACTAGCGGAGCAGGCTCAACTTCAATACAAACGCCCGCTGTGGCGAAGAA ATCGTGGCCGAGACAGCACAGTATTTCCTTCAATTCCCACCAGACTCCCA AGACAGCGCCGAAGGTGCTCACTCTTCGTCTACGGCTACGCGACGATGCC CCAGCCGAACCGAAACCACAGCCGCCAGAGCCTACCGTCGACGGCGGTGT CGAGGAATCGAAGGGTTTCGACCCCCCAAACATTCGCCCCGATAACGGAG TGGAAGAATGCAAGGGATTCGAACCTCCCAATCTGCCTCCTGCCTCCGCC GTAGTCTCCACGGCTGCTTCCCATTCCACCGCTGCGTATCCTCTTTCTAC GGGCGGTGGTAGCGTGCCCGTACCTGTAGCTACGGGTCGGGCGCCATTGT GTCCTGGCGTAAGCGCAACCAATACCCGTGGGTCGACCCCGTCCCGTCCT CGTACGGGTTTTTGGGGCCCGTCTTTCGGAATTGAAGCGGTAGGATCAGC ATCCGTCGGTGGTCCCGCCGCCGCAGTGGTAAGGGTAAACCCCAGTACGC CGCCGGCTCCAAATCCGTGGATAATATCGCCCGATGCACCGACTTTCGCG AAGAACCAAGGGCGGCCTCTTTCTCGATCCTCGTCGCACTCCTCACCATC TACGGGAATCTCCTCCACACGCAGCGGCGAAAGTGCTGCTTCGTATCCCG CAAGGGCTGTCCCCGAGAACGCCAGGACAGCGGCGACCGACCAGGTTGGG CATGGTGTCGGGTCTGGTGAGACAGAGGGAGCAGAAGTAGGAGGAAAAGA GGTCAGCCACGGCGACAGCGGTACAGCTGATGGCGCCGGCATCCCTGGTC ACCTTTCAAAAAAACAGGGTTCGGCGTTTTTGGCGGGGTCGGTCGGCGGT CCACGGTGCACACAACCTGCTGGCGTTGCCACCGGCCTAAGCAGACAGGA AGACGGGTTGGGTGGGCAGGGTCAGGAGCATCCAGCTCAATACGTGGCTA GGCTACTAGATGCCCAGCAGCGAAATACCGAACAACACAATACCACGCGA CAGAGAGACTCGACCGCAGCAGGCCAGATCATGGGGAGTGCTGGCAGCCT CGCTGCAGAGTCGTCTCGAGGAAATGAGGCGGTAGTAGGCACCAAGCGGG GGGAGCGTGCAAGGGTGGGGGGTATTCTTCAGGGTGTGAGGGTTGGCGGA GGTGCGAAAGAGTTGCTGGAGAGGCTTAAACGGGAGCGCGAAGAGTCGTT GGAGTTGGAGAGAAAGTTAACGCAAGCTCTTCTGGATTTGTGATGATAGG TCTTTGGTCGGGAACTACCGTTCGACAGTAATAGATTCTACTTAGTCTGC TTTTGTTTTGATGGATTACCATGAAGTAGGTGCTGTTTTGGCCGTGCTCT TCGTTTGGAAATTTGATATTTTTGATAGATGCCTGGTGATTGTTAGCGTT TATGTTTATAGTTTTTTTTATCTGGTGGGTGTCAACACAGAAGTGGTGAA TCGTTTCGCGCTGACATAATAATTGGTTTGAGCGCCTCAGTATCAGGTAT CATCGCCTTTTTGCCATGCGCGTTGGTTTTTCATGTTTTTTGCAGTGCAC TGTGTGTGGGCTGAATTCGGCGAGAAAATAGTTGTAGCATGGTACATACA GTAGCAGCATGTATCCCTCATAACAAATGATACAGTTTGTTTCGCAGTAG TGCTGGTTCATCAAGCAGGAGACGCGACAGCCAAAAGGTTCGACTCTTGA CTCCGAAGAAAACCAAAATGCTACTTCCTCTTCATGTGTGCGATGGATTC GTTAGAGATGAAGGTCATAGATATGCTTCTAGCAAGAGGTATGTATCGCA CACGACACGGGTGCCAGCGCTCGATCAAAACAGGAGGGCCACCGAAATGC AAATGTCAGATTTCGACGGGAAACGGTGGGAGCGTTAGATGGCACACTCT CC
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Coding sequence (CDS) from alignment at H-paniculata_contig2025:17184..22785+

>mRNA_H-paniculata_contig2025.5235.1 ID=mRNA_H-paniculata_contig2025.5235.1|Name=mRNA_H-paniculata_contig2025.5235.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4620bp|location=Sequence derived from alignment at H-paniculata_contig2025:17184..22785+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCAGCGGTGACCCCACGAAGCGGTAGACAGGAGAGCGGCGATAAACG
CGCGAGTGGGGTTATTGATGCAGTTGAAGGATCGGCGATTAGAGATTTCA
AGGGTGGGCGGACGAATTCGGCGAAAAGATCCAAGAAGACAGAGGCCACC
GTCCTCTGGAGTCCCGGAAAGCGGGGTAGAGAGGGGCCTTCGGTGGTTGG
AGACGGCAAGGGTGACACCGGCATTGGGGGAAGTATAAACGGCAACAGTT
CAGGCTTGAAAAGATACGGTGTAGCCGGCTCAACGCGAGATGTGGGCGGG
CGTAGCCTTGCTTCACTCGCCAGGGCGTTCAAGGAACGCCACGGGGAAGA
CTTGCGCTTGGACGAGGAGGACGATACGGAGGAGACCGAGGAGGAGGACG
AGCCTGCCATGTCCACAAGAAGGATCAAGCGCGATCGCAGTCGTAGTGGA
GACCATACCACCGTAGCTGCTGCTGCCACGGCCGCAACCATGTCTCCCGC
CAAGCTGGCGGCAGAGATACAACGGGCTAGGGCGCGTGCGCGGGAAGAGC
GTTTCGGTGGTGGGAGTCAGCTGCGGCCAGCAAAGGGGCTTCGCGTCGCG
TCGCTACCAGAAAAAGGTGCGTCCGGTGGTATGGCTAAGGTGCAGGCGAT
GGCGGCGACGGCGGCGATAATTGCTTCTAACAGATCAAGCACGGAGGTTG
AACTGTTTGGTACAACAGTACCGAAGTCCAGCGAAAGCTCTACAGCACCA
GACATTGCGAACGCCTCCTCCACATCTTCTGCCGTACCCCTAGCGGTGGT
ACCAGCAGCCGTACGAATATCGCCCACCGGCGGTGCTATGACGAACGTGC
CTGTTCCGTCGGTGCACTCGGTGTCTCAGGATGTACCGGTGGCGACCGCC
GCCGCCGTCGCAGCGGTAGTTCCTCGTAAGCAAGTCTCTGCCCTCGAAAC
TGTTGGTGCCGAAAAATCGTCCGAGAAGGATACCCCGGCGAGTAGCGTAC
CTGCAACACAACGGACCACTAGCGGAGCAGGCTCAACTTCAATACAAACG
CCCGCTGTGGCGAAGAAATCGTGGCCGAGACAGCACAGTATTTCCTTCAA
TTCCCACCAGACTCCCAAGACAGCGCCGAAGGTGCTCACTCTTCGTCTAC
GGCTACGCGACGATGCCCCAGCCGAACCGAAACCACAGCCGCCAGAGCCT
ACCGTCGACGGCGGTGTCGAGGAATCGAAGGGTTTCGACCCCCCAAACAT
TCGCCCCGATAACGGAGTGGAAGAATGCAAGGGATTCGAACCTCCCAATC
TGCCTCCTGCCTCCGCCGTAGTCTCCACGGCTGCTTCCCATTCCACCGCT
GCGTATCCTCTTTCTACGGGCGGTGGTAGCGTGCCCGTACCTGTAGCTAC
GGGTCGGGCGCCATTGTGTCCTGGCGTAAGCGCAACCAATACCCGTGGGT
CGACCCCGTCCCGTCCTCGTACGGGTTTTTGGGGCCCGTCTTTCGGAATT
GAAGCGGTAGGATCAGCATCCGTCGGTGGTCCCGCCGCCGCAGTGGTAAG
GGTAAACCCCAGTACGCCGCCGGCTCCAAATCCGTGGATAATATCGCCCG
ATGCACCGACTTTCGCGAAGAACCAAGGGCGGCCTCTTTCTCGATCCTCG
TCGCACTCCTCACCATCTACGGGAATCTCCTCCACACGCAGCGGCGAAAG
TGCTGCTTCGTATCCCGCAAGGGCTGTCCCCGAGAACGCCAGGACAGCGG
CGACCGACCAGGTTGGGCATGGTGTCGGGTCTGGTGAGACAGAGGGAGCA
GAAGTAGGAGGAAAAGAGGTCAGCCACGGCGACAGCGGTACAGCTGATGG
CGCCGGCATCCCTGGTCACCTTTCAAAAAAACAGGGTTCGGCGTTTTTGG
CGGGGTCGGTCGGCGGTCCACGGTGCACACAACCTGCTGGCGTTGCCACC
GGCCTAAGCAGACAGGAAGACGGGTTGGGTGGGCAGGGTCAGGAGCATCC
AGCTCAATACGTGGCTAGGCTACTAGATGCCCAGCAGCGAAATACCGAAC
AACACAATACCACGCGACAGAGAGACTCGACCGCAGCAGGCCAGATCATG
GGGAGTGCTGGCAGCCTCGCTGCAGAGTCGTCTCGAGGAAATGAGGCGGT
AGTAGGCACCAAGCGGGGGGAGCGTGCAAGGGTGGGGGGTATTCTTCAGG
GTGTGAGGGTTGGCGGAGGTGCGAAAGAGTTGCTGGAGAGGCTTAAACGG
GAGCGCGAAGAGTCGTTGGAGTTGGAGAGAAAGTTAACGCAAGCTCTTCT
GGATTTGTGAATGGCAGCGGTGACCCCACGAAGCGGTAGACAGGAGAGCG
GCGATAAACGCGCGAGTGGGGTTATTGATGCAGTTGAAGGATCGGCGATT
AGAGATTTCAAGGGTGGGCGGACGAATTCGGCGAAAAGATCCAAGAAGAC
AGAGGCCACCGTCCTCTGGAGTCCCGGAAAGCGGGGTAGAGAGGGGCCTT
CGGTGGTTGGAGACGGCAAGGGTGACACCGGCATTGGGGGAAGTATAAAC
GGCAACAGTTCAGGCTTGAAAAGATACGGTGTAGCCGGCTCAACGCGAGA
TGTGGGCGGGCGTAGCCTTGCTTCACTCGCCAGGGCGTTCAAGGAACGCC
ACGGGGAAGACTTGCGCTTGGACGAGGAGGACGATACGGAGGAGACCGAG
GAGGAGGACGAGCCTGCCATGTCCACAAGAAGGATCAAGCGCGATCGCAG
TCGTAGTGGAGACCATACCACCGTAGCTGCTGCTGCCACGGCCGCAACCA
TGTCTCCCGCCAAGCTGGCGGCAGAGATACAACGGGCTAGGGCGCGTGCG
CGGGAAGAGCGTTTCGGTGGTGGGAGTCAGCTGCGGCCAGCAAAGGGGCT
TCGCGTCGCGTCGCTACCAGAAAAAGGTGCGTCCGGTGGTATGGCTAAGG
TGCAGGCGATGGCGGCGACGGCGGCGATAATTGCTTCTAACAGATCAAGC
ACGGAGGTTGAACTGTTTGGTACAACAGTACCGAAGTCCAGCGAAAGCTC
TACAGCACCAGACATTGCGAACGCCTCCTCCACATCTTCTGCCGTACCCC
TAGCGGTGGTACCAGCAGCCGTACGAATATCGCCCACCGGCGGTGCTATG
ACGAACGTGCCTGTTCCGTCGGTGCACTCGGTGTCTCAGGATGTACCGGT
GGCGACCGCCGCCGCCGTCGCAGCGGTAGTTCCTCGTAAGCAAGTCTCTG
CCCTCGAAACTGTTGGTGCCGAAAAATCGTCCGAGAAGGATACCCCGGCG
AGTAGCGTACCTGCAACACAACGGACCACTAGCGGAGCAGGCTCAACTTC
AATACAAACGCCCGCTGTGGCGAAGAAATCGTGGCCGAGACAGCACAGTA
TTTCCTTCAATTCCCACCAGACTCCCAAGACAGCGCCGAAGGTGCTCACT
CTTCGTCTACGGCTACGCGACGATGCCCCAGCCGAACCGAAACCACAGCC
GCCAGAGCCTACCGTCGACGGCGGTGTCGAGGAATCGAAGGGTTTCGACC
CCCCAAACATTCGCCCCGATAACGGAGTGGAAGAATGCAAGGGATTCGAA
CCTCCCAATCTGCCTCCTGCCTCCGCCGTAGTCTCCACGGCTGCTTCCCA
TTCCACCGCTGCGTATCCTCTTTCTACGGGCGGTGGTAGCGTGCCCGTAC
CTGTAGCTACGGGTCGGGCGCCATTGTGTCCTGGCGTAAGCGCAACCAAT
ACCCGTGGGTCGACCCCGTCCCGTCCTCGTACGGGTTTTTGGGGCCCGTC
TTTCGGAATTGAAGCGGTAGGATCAGCATCCGTCGGTGGTCCCGCCGCCG
CAGTGGTAAGGGTAAACCCCAGTACGCCGCCGGCTCCAAATCCGTGGATA
ATATCGCCCGATGCACCGACTTTCGCGAAGAACCAAGGGCGGCCTCTTTC
TCGATCCTCGTCGCACTCCTCACCATCTACGGGAATCTCCTCCACACGCA
GCGGCGAAAGTGCTGCTTCGTATCCCGCAAGGGCTGTCCCCGAGAACGCC
AGGACAGCGGCGACCGACCAGGTTGGGCATGGTGTCGGGTCTGGTGAGAC
AGAGGGAGCAGAAGTAGGAGGAAAAGAGGTCAGCCACGGCGACAGCGGTA
CAGCTGATGGCGCCGGCATCCCTGGTCACCTTTCAAAAAAACAGGGTTCG
GCGTTTTTGGCGGGGTCGGTCGGCGGTCCACGGTGCACACAACCTGCTGG
CGTTGCCACCGGCCTAAGCAGACAGGAAGACGGGTTGGGTGGGCAGGGTC
AGGAGCATCCAGCTCAATACGTGGCTAGGCTACTAGATGCCCAGCAGCGA
AATACCGAACAACACAATACCACGCGACAGAGAGACTCGACCGCAGCAGG
CCAGATCATGGGGAGTGCTGGCAGCCTCGCTGCAGAGTCGTCTCGAGGAA
ATGAGGCGGTAGTAGGCACCAAGCGGGGGGAGCGTGCAAGGGTGGGGGGT
ATTCTTCAGGGTGTGAGGGTTGGCGGAGGTGCGAAAGAGTTGCTGGAGAG
GCTTAAACGGGAGCGCGAAGAGTCGTTGGAGTTGGAGAGAAAGTTAACGC
AAGCTCTTCTGGATTTGTGA
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