mRNA_H-paniculata_contig20206.5215.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig20206.5215.1 vs. uniprot
Match: D7FU89_ECTSI (Phospholipid-transporting ATPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU89_ECTSI) HSP 1 Score: 401 bits (1031), Expect = 3.120e-129 Identity = 200/267 (74.91%), Postives = 232/267 (86.89%), Query Frame = 1
Query: 16 QWAVGLVISTGHDTKVMMSIAKAPEKSSHLNARINTEIKGLAMMLFLFCLAGGVGSSIWKYIHREFRTKVLMDTSGLGFNFIVQFFYYLLLLYGFIPISLYVSQNFMRFFQASYRRASFMDQDLDMYHEPTDTPSRVRTMNLNEDLGQITHVFSDKTGTLTQNVMDFRKCTVGGKAYGKGMTEIGQAALQLRGVRPTEEELTAEDLAAENAAPHVNFYDPSLFADLEAEVKRGEGAAGKLTAFMTLLALCHTVIPERPDNDKEVILS 816
+WAVGLVISTGHDTKVMMSIA+APEK+SHLN+R+NTEIKGLA+ML LFCL G +GSSIW+ H EFR +VLM + L +F+VQFFYYLLLLYGF+PISLYVSQNF+RFFQ+ FMDQDLDMYHE TDTPSRVRTMNLNEDLGQITHVFSDKTGTLTQNVMDFRKCTVGGK+YGKGMTEIGQAAL+L+GV ++EEL+AE +A + AAPHVNFYDP +F DL+AE G+G G LT F+T+LALCHTVIPERP++ E++LS
Sbjct: 309 KWAVGLVISTGHDTKVMMSIAQAPEKTSHLNSRVNTEIKGLALMLVLFCLTGAMGSSIWQSAHEEFRAQVLMLDTDLVADFVVQFFYYLLLLYGFVPISLYVSQNFIRFFQSW-----FMDQDLDMYHEATDTPSRVRTMNLNEDLGQITHVFSDKTGTLTQNVMDFRKCTVGGKSYGKGMTEIGQAALELKGVELSQEELSAEQMAQDFAAPHVNFYDPVMFRDLQAEADGGDGT-GPLTEFLTVLALCHTVIPERPNDSDEIVLS 569
BLAST of mRNA_H-paniculata_contig20206.5215.1 vs. uniprot
Match: A0A836CFX1_9STRA (Phospholipid-transporting ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFX1_9STRA) HSP 1 Score: 275 bits (703), Expect = 4.070e-83 Identity = 154/288 (53.47%), Postives = 196/288 (68.06%), Query Frame = 1
Query: 22 AVGLVISTGHDTKVMMSIAKAPEKSSHLNARINTEIKGLAMMLFLFCLAGGVGSSIWKYIHREFRTKVLM------------DTSG-LGFNFIVQFFYYLLLLYGFIPISLYVSQNFMRFFQASYRRASFMDQDLDMYHEPTDTPSRVRTMNLNEDLGQITHVFSDKTGTLTQNVMDFRKCTVGGKAYGKGMTEIGQAALQLRGVRPTEEELTAEDLAAENAAPHVNFYDPSLFADLEAE----------VKRGEGAAGKLTAFMTLLALCHTVIPERPDNDKEVILS 816
A+GLV++TG DTK+MMS+ AP K+S L+AR+N EIK +A+++ FC G S+ W + R+ R + D +G L +++ FFYY+LLL FIPISLYVS NF+RFFQA FM+QDL+MYHE TDTP+RVRTMNLNEDLGQ++HVFSDKTGTLT NVMDFRKC+VGGK YG+G+TEIG+AAL++ G +E L AE L+ AAPHVNFYDP++FAD+ + +L AF T LALCHTVIPE+ D EV+LS
Sbjct: 327 ALGLVLNTGMDTKIMMSMTAAPTKASRLSARVNREIKRMAVVMLAFCALGAALSTAW--LARDSRDAWYLKGGADRYVEGQGDAAGELVGQYVIAFFYYMLLLNSFIPISLYVSMNFVRFFQAW-----FMNQDLEMYHEETDTPARVRTMNLNEDLGQVSHVFSDKTGTLTCNVMDFRKCSVGGKVYGRGITEIGRAALEIAGKEVPKEVLEAETLSRRVAAPHVNFYDPAIFADMHPQHGDXXXXXXXXXXXXXXXQRLAAFFTALALCHTVIPEKL-QDGEVVLS 606
BLAST of mRNA_H-paniculata_contig20206.5215.1 vs. uniprot
Match: D7G0C1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0C1_ECTSI) HSP 1 Score: 281 bits (718), Expect = 4.160e-83 Identity = 143/269 (53.16%), Postives = 197/269 (73.23%), Query Frame = 1
Query: 16 QWAVGLVISTGHDTKVMMSIAKAPEKSSHLNARINTEIKGLAMMLFLFCLAGGVGSSIWKYIHREFRTKVLMDTSG--LGFNFIVQFFYYLLLLYGFIPISLYVSQNFMRFFQASYRRASFMDQDLDMYHEPTDTPSRVRTMNLNEDLGQITHVFSDKTGTLTQNVMDFRKCTVGGKAYGKGMTEIGQAALQLRGVRPTEEELTAEDLAAENAAPHVNFYDPSLFADLEAEVKRGEGAAGKLTAFMTLLALCHTVIPERPDNDKEVILS 816
+W +GLV++TG DTK+MMS++KAP K+SHL++RIN EIK +A ++ C+ G + +++W ++ + + D++ L F QF Y LLL FIPISLYVS NF+RF Q+ FM+QDLDMYH +DTP+RVRTMNLNEDLGQ++H+FSDKTGTLT N+MDFRK +VGG +YG G+TEIG+AA+ + G + + L AE+ A ++A PHVNFYDPS++ DL+ + +RG+ A K+ F T LALCHTVIPER ++ EV+LS
Sbjct: 396 RWVLGLVLNTGPDTKIMMSMSKAPSKASHLSSRINEEIKRVAAVMGSICILGAMLTTLWNAQYQTSKPYLRFDSASDSLAGMFFTQFLYNALLLNSFIPISLYVSMNFVRFLQSW-----FMNQDLDMYHADSDTPTRVRTMNLNEDLGQVSHIFSDKTGTLTCNIMDFRKFSVGGVSYGLGITEIGRAAMLVEGEKVPADVLMAEEKAKDHAVPHVNFYDPSVYQDLQGKGERGQDQARKIKDFFTALALCHTVIPERFEDTDEVMLS 659
BLAST of mRNA_H-paniculata_contig20206.5215.1 vs. uniprot
Match: D7FU18_ECTSI (Phospholipid-transporting ATPase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU18_ECTSI) HSP 1 Score: 230 bits (587), Expect = 3.190e-65 Identity = 129/261 (49.43%), Postives = 162/261 (62.07%), Query Frame = 1
Query: 16 QWAVGLVISTGHDTKVMMSIAKAPEKSSHLNARINTEIKGLAMMLFLFCLAGGVGSSIWKYIHREFRTKVLMDTSGLGFNF---IVQFFYYLLLLYGFIPISLYVSQNFMRFFQASYRRASFMDQDLDMYHEPTDTPSRVRTMNLNEDLGQITHVFSDKTGTLTQNVMDFRKCTVGGKAYGKGMTEIGQAALQLRGVRPTEEELTAEDLAAENA-APHVNFYDPSLFADLEAEVKRGEGAAGKLTAFMTLLALCHTVIPER 786
+W VGLV++TG DTK++MS + P K+S L R N E+ + +L L C G VGS +W E + +D G +QF Y LLL FIP+SLYVS ++F QA FM QDLDMYHE TDTP+ VRTM LNE+LGQ++HVFSDKTGTLTQNVMDFRK +VGG +YG+G+T I +A G +E+L AE + A+ PHV FYDP L DL++ GE L F LA+CHTVIPER
Sbjct: 219 RWVVGLVLNTGPDTKIVMSSLEPPHKTSRLEQRTNVEVWRIVRLLCLVCFLGAVGSLVWNATSAEDHVYLRIDVGSWGNQMKTTFIQFLYLFLLLGNFIPVSLYVSMGTVKFSQAF-----FMKQDLDMYHEDTDTPALVRTMALNEELGQVSHVFSDKTGTLTQNVMDFRKFSVGGVSYGRGVTTIARAVAAELGHEIPQEDLEAEAVIAKQPPVPHVRFYDPRLLEDLQSST--GEEQRALLLDFFLALAVCHTVIPER 472
BLAST of mRNA_H-paniculata_contig20206.5215.1 vs. uniprot
Match: K3W6Q1_GLOUD (Phospholipid-transporting ATPase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6Q1_GLOUD) HSP 1 Score: 229 bits (585), Expect = 4.600e-65 Identity = 126/268 (47.01%), Postives = 177/268 (66.04%), Query Frame = 1
Query: 19 WAVGLVISTGHDTKVMMSIAKAPEKSSHLNARINTEIKGLAMMLFLFCLAGGVGSSIWKYIHREFRTKVLMDTSG--LGFNFIVQFFYYLLLLYGFIPISLYVSQNFMRFFQASYRRASFMDQDLDMYHEPTDTPSRVRTMNLNEDLGQITHVFSDKTGTLTQNVMDFRKCTVGGKAYGKGMTEIGQAALQLRGVRPTEEELTAEDLAAENAAPHVNFYDPSLFADLEAEVKRGEGAAGKLTAFMTLLALCHTVIPERPDNDKEVILS 816
W G+V++TG DTK+MMS + P K S ++ IN I L ++L LF G G+ IWK +++ + +D SG G ++I+ FYY+LL+Y F+PISL VS + +++ QA F+ D +YH+ TDTP+ VR+M+LNE+LGQI++VFSDKTGTLT N+M+FRKC++GG +YGKG TEIG AA++ G +P E T++ A P+VNF P LFAD++ G ++ AF T LA+CHTVIPER +N EVILS
Sbjct: 254 WVHGIVLNTGKDTKIMMSNSAPPSKMSTMDQSINNYIVALLVILILFSAIGATGAVIWKSTNKK-PWYLALDDSGNSAGVDWIIMLFYYMLLMYQFVPISLCVSMSMVKYLQAQ-----FIQWDKQIYHDTTDTPTLVRSMSLNEELGQISYVFSDKTGTLTCNIMEFRKCSIGGVSYGKGTTEIGLAAMKRSG-KPIPEPSTSQQSA--KPVPYVNFDGPELFADMKGT--SGSNQQRRINAFFTHLAICHTVIPERRENSTEVILS 510
BLAST of mRNA_H-paniculata_contig20206.5215.1 vs. uniprot
Match: A0A8K1CCB5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CCB5_PYTOL) HSP 1 Score: 214 bits (545), Expect = 1.180e-59 Identity = 126/272 (46.32%), Postives = 174/272 (63.97%), Query Frame = 1
Query: 19 WAVGLVISTGHDTKVMMSIAKAPEKSSHLNARINTEIKGLAMMLFLFCLAGGVGSSIWKYIHREFRTKVLMDTSGLGF-NFIVQFFYYLLLLYGFIPISLYVSQNFMRFFQASYRRASFMDQDLDMYHEPTDTPSRVRTMNLNEDLGQITHVFSDKTGTLTQNVMDFRKCTVGGKAYGKGMTEIGQAALQLRGVRPTEEELTAEDLAAENAAPHVNFYDPSLFADLEAEVKRGEGAAG-----KLTAFMTLLALCHTVIPERPDNDKEVILS 816
W G+V +TG DTK+MMS + P K S ++ IN I L ++L LF +AG GS +WK + + L ++ GF +IV FYYLLLLY F+PISL VS + +++ QA F+ D ++Y+ TDTP+ VR+M+LNE+LGQI+++FSDKTGTLT NVM+FRKC++GG +YG G TEIG AA++ G T E+ + + P+VNFY P LF D+E GA+G ++ AF T LA+CHTVIPER +N E+ LS
Sbjct: 250 WVHGVVFNTGKDTKIMMSNSAPPSKMSTMDQVINHYIMVLLVILILFSVAGASGSVLWKTNNDKQWYLALEVSNRSGFVEWIVMMFYYLLLLYQFVPISLSVSMSMVKYIQAQ-----FIQWDKEIYYAETDTPTLVRSMSLNEELGQISYIFSDKTGTLTCNVMEFRKCSIGGVSYGHGTTEIGLAAMKRSG--KTIPEVNVDPNVKQ--IPYVNFYGPELFKDME-------GASGPEQKERIDAFFTHLAVCHTVIPERHENSTEITLS 505
BLAST of mRNA_H-paniculata_contig20206.5215.1 vs. uniprot
Match: A0A6H5JC88_9PHAE (PhoLip_ATPase_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC88_9PHAE) HSP 1 Score: 213 bits (542), Expect = 2.620e-59 Identity = 120/271 (44.28%), Postives = 170/271 (62.73%), Query Frame = 1
Query: 16 QWAVGLVISTGHDTKVMMSIAKAPEKSSHLNARINTEIKGLAMMLFLFCLAGGVGSSIWKYIHREFRTKVLMDTSG--LGFNFIVQFFYYLLLLYGFIPISLYVSQNFMRFFQASYRRASFMDQDLDMYHEPTDTPSRVRTMNLNEDLGQITHVFSDKTGTLTQNVMDFRKCTVGGKAYGKGMTEIGQAALQLRGVRPTEEELTAEDLAAENAAPHVNFYDPSLFA--DLEAEVKRGEGAAGKLTAFMTLLALCHTVIPERPDNDKEVILS 816
+W +GLV++TG DTK+MMS++KAP K+SHL++RIN EIK +A ++ C+ G + +++W ++ + + +++ L F QF Y LLL FIPISLYVS NF+RF Q+ FM+QDLDMYH +DTP+RVRTMNLNEDLGQ G+TE+G+AA+ + G + + L AE+ A ++A PHVNFYDPS++ DL+ + +RG+ A K+ F T LALCHTVIPER ++ EV+LS
Sbjct: 368 RWVLGLVLNTGPDTKIMMSMSKAPSKASHLSSRINEEIKRVAAVMGSICILGAMLTTLWNAQYQTSKPYLRFESASDSLAGMFFTQFLYNALLLNSFIPISLYVSMNFVRFLQSW-----FMNQDLDMYHADSDTPARVRTMNLNEDLGQ-------------------------------GITEVGRAAMLVEGKKVPADVLLAEEKAKDHAVPHVNFYDPSVYQVQDLQGKGERGQDQARKIKDFFTALALCHTVIPERFEDTDEVMLS 602
BLAST of mRNA_H-paniculata_contig20206.5215.1 vs. uniprot
Match: A0A6H5KPG5_9PHAE (P-type phospholipid transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPG5_9PHAE) HSP 1 Score: 213 bits (541), Expect = 4.700e-59 Identity = 126/269 (46.84%), Postives = 157/269 (58.36%), Query Frame = 1
Query: 16 QWAVGLVISTGHDTKVMMSIAKAPEKSSHLNARINTEIKGLAMMLFLFCLAGGVGSSIWKYIHREFRTKVLMDTSGLGFNF---IVQFFYYLLLLYGFIPISLYVSQNFMRFFQASYRRASFMDQDLDMYHEPTDTPSRVRTMNLNEDLGQITHVFSDKTGTLTQNVMDFRKCTVGGKAYGKGMTEIGQAALQLRGVRPTEEELTAEDLAAENA-APHVNFYDPSLFADLEAEVKR---------GEGAAGKLTAFMTLLALCHTVIPE 783
+W VGLV++TG DTK++MS + R N E+ + +L L C G VGS +W E + MD G +QF Y LLL FIP+SLYVS ++F QA FM QDLDMYHE TDTP+ VRTM LNE+LGQ++HVFSDKTGTLTQNVMDFRK +VGG +YG+G+T IG+A G +E+L AE + A+ PHV F+DP L DL+ R GE L F LA+CHTVIPE
Sbjct: 102 RWVVGLVLNTGPDTKIVMSSLE----------RTNVEVWRIVRLLCLVCFLGAVGSLVWNATSAEDHVYLRMDMGSWGNQMKTTFIQFLYLFLLLGNFIPVSLYVSMGTVKFSQAF-----FMKQDLDMYHEDTDTPALVRTMALNEELGQVSHVFSDKTGTLTQNVMDFRKFSVGGVSYGRGVTTIGRAVAAELGHEIPQEDLEAEAVIAKQPPVPHVRFHDPRLLEDLQGSTVRFEGDLQGSKGEEQRALLLDFFLALAVCHTVIPE 355
BLAST of mRNA_H-paniculata_contig20206.5215.1 vs. uniprot
Match: A0A662Y2H0_9STRA (Phospholipid-transporting ATPase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y2H0_9STRA) HSP 1 Score: 210 bits (535), Expect = 2.640e-58 Identity = 120/269 (44.61%), Postives = 168/269 (62.45%), Query Frame = 1
Query: 19 WAVGLVISTGHDTKVMMSIAKAPEKSSHLNARINTEIKGLAMMLFLFCLAGGVGSSIWKYIHREFRTKVLMDTSGLGF-NFIVQFFYYLLLLYGFIPISLYVSQNFMRFFQASYRRASFMDQDLDMYHEPTDTPSRVRTMNLNEDLGQITHVFSDKTGTLTQNVMDFRKCTVGGKAYGKGMTEIGQAALQLRGVRPTEEELTAEDLAAENAAPHVNFYDPSLFADLEAEVKRGEGAAG--KLTAFMTLLALCHTVIPERPDNDKEVILS 816
W G+V +TG DTK+MMS + P K S ++ IN I L +L LF AG G+ +WK + L ++ F ++++ FYYLLL+Y F+PISL VS + +++ QA F+ D+ +YH TDTP+ VR+M+LNE+LGQI+++FSDKTGTLT NVM+FRKC++GG +YG G TEIG AAL+ G +P + + P+VNF P LF D+ K G G+ ++ AF T LA+CHTVIPER +N E+ LS
Sbjct: 252 WVHGVVFNTGKDTKIMMSNSAPPSKMSSMDRSINQYIAVLLAILILFSAAGATGAVVWKSRNDHVPYLQLSASTNSAFVDWLIMLFYYLLLMYQFVPISLAVSMSMVKYLQAQ-----FIQWDIKIYHPVTDTPTLVRSMSLNEELGQISYIFSDKTGTLTCNVMEFRKCSIGGVSYGNGTTEIGLAALKRAG-KPLPDMSVVSSVPQ---IPYVNFDGPELFNDM----KGGSGSEQQRRIDAFFTHLAVCHTVIPERHENSSEITLS 507
BLAST of mRNA_H-paniculata_contig20206.5215.1 vs. uniprot
Match: D0MZV4_PHYIT (Phospholipid-transporting ATPase n=13 Tax=Phytophthora TaxID=4783 RepID=D0MZV4_PHYIT) HSP 1 Score: 210 bits (534), Expect = 3.590e-58 Identity = 118/269 (43.87%), Postives = 171/269 (63.57%), Query Frame = 1
Query: 16 QWAVGLVISTGHDTKVMMSIAKAPEKSSHLNARINTEIKGLAMMLFLFCLAGGVGSSIWKYIHRE--FRTKVLMDTSGLGFNFIVQFFYYLLLLYGFIPISLYVSQNFMRFFQASYRRASFMDQDLDMYHEPTDTPSRVRTMNLNEDLGQITHVFSDKTGTLTQNVMDFRKCTVGGKAYGKGMTEIGQAALQLRGVRPTEEELTAEDLAAENAAPHVNFYDPSLFADLEAEVKRGEGAAGKLTAFMTLLALCHTVIPERPDNDKEVILS 816
+W G+V +TG DTK+MMS + P K S ++ IN L +L +F G G+ WK H + + + D S + ++I+ +FYYLLL+Y F+PISL VS + +++ QA F+ D+++YH TDTP+ VR+M+LNE+LGQI+++FSDKTGTLT NVM+FRKC++GG +YG G TEIG AAL+ G +P + +T + + P+VNF P L D++ G G++ AF T LA+CHTVIPER +N E+ LS
Sbjct: 249 EWVHGVVFNTGKDTKIMMSNSAPPSKMSSMDRSINQYTVVLLAILVVFSAVGATGAVAWKTNHDSLWYLKQTVSDNSAIV-DWIIMWFYYLLLMYQFVPISLAVSMSMVKYIQAQ-----FIQWDINIYHPDTDTPTLVRSMSLNEELGQISYIFSDKTGTLTCNVMEFRKCSIGGVSYGNGTTEIGLAALRRAG-KPLPD-MTFQSKGPK--VPYVNFDGPELLNDMKGN--SGSVQQGRIDAFFTHLAVCHTVIPERHENSSEITLS 505 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20206.5215.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig20206.5215.1 >prot_H-paniculata_contig20206.5215.1 ID=prot_H-paniculata_contig20206.5215.1|Name=mRNA_H-paniculata_contig20206.5215.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=272bp MWLRRQWAVGLVISTGHDTKVMMSIAKAPEKSSHLNARINTEIKGLAMMLback to top mRNA from alignment at H-paniculata_contig20206:161..4511- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig20206.5215.1 ID=mRNA_H-paniculata_contig20206.5215.1|Name=mRNA_H-paniculata_contig20206.5215.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4351bp|location=Sequence derived from alignment at H-paniculata_contig20206:161..4511- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig20206:161..4511- >mRNA_H-paniculata_contig20206.5215.1 ID=mRNA_H-paniculata_contig20206.5215.1|Name=mRNA_H-paniculata_contig20206.5215.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1632bp|location=Sequence derived from alignment at H-paniculata_contig20206:161..4511- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |