mRNA_H-paniculata_contig202.5211.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig202.5211.1
Unique NamemRNA_H-paniculata_contig202.5211.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig202.5211.1 vs. uniprot
Match: A0A6H5KN25_9PHAE (Methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KN25_9PHAE)

HSP 1 Score: 647 bits (1669), Expect = 5.760e-225
Identity = 320/398 (80.40%), Postives = 351/398 (88.19%), Query Frame = 2 
Query:  164 MVEKALDAARDNPRTSASVAAVAGVGMIYVLLAKHKTKRDGMDYKSMYGVTHMLNNAESVLQRNDVKDAIDGYEELFTGARKEHGAITTEESIKRRQTEYQKMVNSFYNLVTDFYEWGWGQSFHFAPRRKDETFRESIRRAEYVLASRIEVRPGSKVLDVGCGVGGPMRNIAVFGDCEVTGITINQYQVNVGNKYNSEAGLAECCRSTQGDFQTLPFPAAQFDAAYQIEATCHSPDKVQVFREVCRVLKPGSMFGGYEWVVTEKYDCSNPDHVRLKEGIEVGNGLPTLATPAIIKANLEEAGFEVVYAYNANEGAHDKMEIAWYQTLCGSF-SLSGFRMTHFGRVCTHGLVCALEMLRIAPKGSGQVSTLLNKTAIDIVDAGKLEIFTPSYFFAARKK 1354
            M+E ALDAAR+ P  SAS+AA   V    +LL+++K KRDG+DY+ + GVTHMLNN +SVL+++DVK +I  YEELF GAR EHGAITTE+SIKRRQTEYQKMVNSFYNLVTDFYE+GWGQSFHFAPRRK+E+FRESIRRAEYVLASRIEVRPGSKVLDVGCGVGGPMRNIAVFGDC V GITINQYQVNVGNKYN EAGL++ C S QGDFQ LPF  A+FDAAYQIEATCHSPDKVQVFREVCRVLKPG MFGGYEWVVT+KY+  N  HV LKEGIEVGNGLPTLATPAIIKANLEEAGFEVVYAY+ANE  H + EI WYQ LCGSF S+SGFR TH GRVCTHGLVC +EMLRIAPKGS QVSTLLNKTAID+V +G+LEIFTPSYFFAARKK
Sbjct:    1 MLEAALDAAREKPGISASIAAAVSVLATVMLLSRNKPKRDGLDYEGIAGVTHMLNNTDSVLKKDDVKQSIVDYEELFEGARTEHGAITTEKSIKRRQTEYQKMVNSFYNLVTDFYEYGWGQSFHFAPRRKNESFRESIRRAEYVLASRIEVRPGSKVLDVGCGVGGPMRNIAVFGDCAVQGITINQYQVNVGNKYNREAGLSDSCSSRQGDFQNLPFEDAEFDAAYQIEATCHSPDKVQVFREVCRVLKPGCMFGGYEWVVTDKYEPDNEAHVTLKEGIEVGNGLPTLATPAIIKANLEEAGFEVVYAYDANEHTHSESEIPWYQPLCGSFWSISGFRQTHLGRVCTHGLVCTMEMLRIAPKGSAQVSTLLNKTAIDLVKSGQLEIFTPSYFFAARKK 398
[Close]
BLAST of mRNA_H-paniculata_contig202.5211.1 vs. uniprot
Match: A0A835YJE1_9STRA (Methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJE1_9STRA)

HSP 1 Score: 486 bits (1250), Expect = 1.420e-161
Identity = 253/405 (62.47%), Postives = 294/405 (72.59%), Query Frame = 2 
Query:  167 VEKALD--AARDNPRTSASVAAVAGVGMIYVLLAKHKTK-----RDGMDYK-SMYGVTHMLNNAESVLQRNDVKDAIDGYEELFTGARKEHGAITTEESIKRRQTEYQKMVNSFYNLVTDFYEWGWGQSFHFAPRRKDETFRESIRRAEYVLASRIEVRPGSKVLDVGCGVGGPMRNIAVFGDCEVTGITINQYQVNVGNKYNSEAGLAECCRSTQGDFQTLPFPAAQFDAAYQIEATCHSPDKVQVFREVCRVLKPGSMFGGYEWVVTE-KYDCSNPDHVRLKEGIEVGNGLPTLATPAIIKANLEEAGFEVVYAYNANEGAHDKMEIAWYQTLCGSFSLSGFRMTHFGRVCTHGLVCALEMLRIAPKGSGQVSTLLNKTAIDIVDAGKLEIFTPSYFFAARKK 1354
            +E+ALD  +A  + R   S  A A V    V+L   + K     RD  D+  ++ G   ML+N++SVLQR++VKD IDGYE LF GARK  GAITTEESI +RQ+EYQKM+NSFYNLVTDFYEWGWG SFHFAPR   E F ESI+RAEY L SR+ ++PG +VLDVGCGVGGPMR++  F    + GITINQYQVNVGNKYN   GLA+ C+  QGDFQ  PF  A FDAAY IEATCHSPDKVQ F EV RVLKPG  F GYEWVV   K+D  + DHVR+KEGIEVGNGLPTL  P  + A LE AGFEV+  Y+AN   H   ++ WY TL GS +LSGFRMT FGR CTH LV  LE LR+AP+GS QVS LLN TAID+VD G+ +IFTPSYFF ARKK
Sbjct:    8 LERALDRVSAEVSKRPVESSLAAAAVVTFAVVLKMRRAKKIQMARDSNDFNDTIQGSLSMLSNSDSVLQRDEVKDCIDGYEGLFAGARKATGAITTEESIAKRQSEYQKMINSFYNLVTDFYEWGWGPSFHFAPRVVGEGFMESIKRAEYHLCSRLGMKPGMRVLDVGCGVGGPMRHMCQFSGASIDGITINQYQVNVGNKYNERKGLADLCKLIQGDFQKQPFEDATFDAAYAIEATCHSPDKVQCFSEVARVLKPGCCFAGYEWVVLPGKFDPEDKDHVRIKEGIEVGNGLPTLVYPEDVVAALEAAGFEVLDHYDANREVHSPHQVPWYATLGGSMTLSGFRMTRFGRACTHALVFTLETLRVAPRGSTQVSALLNATAIDLVDGGRRQIFTPSYFFVARKK 412
[Close]
BLAST of mRNA_H-paniculata_contig202.5211.1 vs. uniprot
Match: A0A7S2PD46_9STRA (Methyltransferase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PD46_9STRA)

HSP 1 Score: 446 bits (1147), Expect = 2.920e-146
Identity = 234/388 (60.31%), Postives = 285/388 (73.45%), Query Frame = 2 
Query:  215 SVAAVAGVGMIYVLLAKHKTKRDGMDYKSMYGVTH---MLNNAESVLQRNDVKDAIDGYEELFTGARKEHGAITTEESIKRRQTEYQKMVNSFYNLVTDFYEWGWGQSFHFAPRRKDETFRESIRRAEYVLASRIEVRPGSKVLDVGCGVGGPMRNIAVFGDCEVTGITINQYQVNVGNKYNSEAGLAECCRSTQGDFQTLP--FPAAQFDAAYQIEATCHSPDKVQVFREVCRVLKPGSMFGGYEWVVTEK--YDCSNPDHVRLKEGIEVGNGLPTLATPAIIKANLEEAGFEVVYAYNANEGAHDKMEIAWYQTLCGSF-SLSGFRMTHFGRVCTHGLVCALEMLRIAPKGSGQVSTLLNKTAIDIVDAGKLEIFTPSYFFAARKK 1354
            S+AA+ G  ++   + K   KRD   YKS   V+    +L+N++SVL R+ VK++I GYE LF+GARK  G  TT +SI+ R+ EY  MVNSFY+LVTDFYEWGWGQSFHFAPR K ETF ESI RAE+ LA R  + P SKVLDVGCGVGGPMRNI  F   ++TG+TIN+YQVNVGN+Y ++ G+ + CR  QGDFQ LP  F A  FDAAY IEATCHSPD+   F  V   LK G +F GY+WVV  +  YD  NP+HVR+KEGIEVGNGLPTLAT   +   LEE+GFEV+ +++AN   H   EI WYQTL GSF +LSGFRMTH GR+CTH +V ALE +RIAPKGS +VS+LLN TA+D+V+ GK EIFTPS+FF ARKK
Sbjct:   20 SLAALLGAHLVLSFILK-SFKRDS--YKSFGFVSDAASLLSNSDSVLGRDGVKESIAGYERLFSGARKNVGTTTTADSIQHREKEYATMVNSFYDLVTDFYEWGWGQSFHFAPRLKGETFEESIYRAEHYLALRSNITPTSKVLDVGCGVGGPMRNIQQFTGADITGVTINEYQVNVGNQYCAQKGIDQKCRLIQGDFQKLPEKFEAGTFDAAYAIEATCHSPDRKICFSGVNHCLKKGGLFVGYDWVVLPETGYDEKNPEHVRVKEGIEVGNGLPTLATSQEVVRALEESGFEVLDSFDANRNVHSDREIPWYQTLYGSFFTLSGFRMTHIGRICTHSIVSALEFMRIAPKGSVRVSSLLNATALDLVEGGKEEIFTPSFFFLARKK 404
[Close]
BLAST of mRNA_H-paniculata_contig202.5211.1 vs. uniprot
Match: A0A1Z5JVH4_FISSO (Methyltransferase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JVH4_FISSO)

HSP 1 Score: 439 bits (1129), Expect = 1.170e-143
Identity = 222/384 (57.81%), Postives = 283/384 (73.70%), Query Frame = 2 
Query:  218 VAAVAGVGMIYVLLAKHKTKRDGMDYKSMY-GVTHMLNNAESVLQRNDVKDAIDGYEELFTGARKEHGAITTEESIKRRQTEYQKMVNSFYNLVTDFYEWGWGQSFHFAPRRKDETFRESIRRAEYVLASRIEVRPGSKVLDVGCGVGGPMRNIAVFGDCEVTGITINQYQVNVGNKYNSEAGLAECCRSTQGDFQTLP--FPAAQFDAAYQIEATCHSPDKVQVFREVCRVLKPGSMFGGYEWVVTEK--YDCSNPDHVRLKEGIEVGNGLPTLATPAIIKANLEEAGFEVVYAYNANEGAHDKMEIAWYQTLCGSFSLSGFRMTHFGRVCTHGLVCALEMLRIAPKGSGQVSTLLNKTAIDIVDAGKLEIFTPSYFFAARKK 1354
            + A AG     +LLA   T    + YK+ + G   +L N +SVL+RN VK+++D Y++LFTGARK  G++  + SI++R+ EY+ M+N+FY+LVTDFYEWGWGQSFHFAPR K ETF ESI+RAE+ LA R  + P +K +DVGCGVGGPMRNI  F + ++TG+TIN+YQV VGNKY  E G+A+ CR  QGDFQ LP   PA QFD A+ IEATCHSPD+VQ F  V ++LK G +F GYEWVV  +  +D +N DH+R+KEGIEVGNGLPTLAT   ++  L+++GFEV+ A++AN   H   +I WY TL G +SLSGFRMT  GR+ TH +V  LE+L IAPKG+ +VS LLN TAID+VD GK EIFTPSYFF ARKK
Sbjct:   15 ITAAAGEHSTPLLLAGGATVAVTLLYKTCFSGSATLLQNKDSVLKRNQVKNSMDDYDDLFTGARKNVGSLHDQASIQKREKEYKTMINNFYDLVTDFYEWGWGQSFHFAPRVKGETFMESIKRAEHYLALRAGMGPNTKAVDVGCGVGGPMRNIQHFTNSDITGVTINEYQVKVGNKYCQEQGIADKCRLIQGDFQKLPELLPAGQFDVAFAIEATCHSPDRVQCFSGVNQLLKKGGLFVGYEWVVLPEKGFDPNNKDHLRIKEGIEVGNGLPTLATAEQVQQALKDSGFEVLEAFDANANVHSPHQIPWYDTLNGKYSLSGFRMTRLGRMITHAVVSTLELLWIAPKGTVRVSALLNATAIDLVDGGKQEIFTPSYFFLARKK 398
[Close]
BLAST of mRNA_H-paniculata_contig202.5211.1 vs. uniprot
Match: A0A7S1YWV2_9STRA (Methyltransferase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YWV2_9STRA)

HSP 1 Score: 431 bits (1109), Expect = 1.260e-140
Identity = 213/353 (60.34%), Postives = 263/353 (74.50%), Query Frame = 2 
Query:  308 GVTHMLNNAESVLQRNDVKDAIDGYEELFTGARKEHGAITTEESIKRRQTEYQKMVNSFYNLVTDFYEWGWGQSFHFAPRRKDETFRESIRRAEYVLASRIEVRPGSKVLDVGCGVGGPMRNIAVFGDCEVTGITINQYQVNVGNKYNSEAGLAECCRSTQGDFQTL--PFPAAQFDAAYQIEATCHSPDKVQVFREVCRVLKPGSMFGGYEWVVTEK--YDCSNPDHVRLKEGIEVGNGLPTLATPAIIKANLEEAGFEVVYAYNANEGAHDKMEIAWYQTLCGSFSLSGFRMTHFGRVCTHGLVCALEMLRIAPKGSGQVSTLLNKTAIDIVDAGKLEIFTPSYFFAARKK 1354
            G   +LNN +SVL +  V D+ID YE LFTGARK+ G+ +   SI+ RQ EY+ MV+SFY+LVTDFYEWGWGQSFHFAPR K ETF ESI+RAEY LA R  +   SKVLDVGCGVGGPMRNI  F   ++TG+TIN YQV V N+Y ++ G+++ CR  QGDFQ L   F    +DAAY IEATCHSPD+++ F+ + R LK G +F GYEWVV  +  YD  N DHVR+KEGIEVGNGLPTLAT A I   LE++GF+V  A++AN G H   EI WY TLCGSF+++GFRMT  GR+CTH +V  LEM RIAP+GS +VS LLN TA+D+V+AG+ E+FTPS+FF A K+
Sbjct:   49 GGVSLLNNKDSVLTKEGVNDSIDNYESLFTGARKQVGSTSENNSIEMRQKEYKTMVSSFYDLVTDFYEWGWGQSFHFAPRVKGETFIESIKRAEYFLALRAGITDKSKVLDVGCGVGGPMRNIQQFTGADITGVTINDYQVRVANQYCAQRGISDKCRVMQGDFQKLNEKFDENVYDAAYAIEATCHSPDRIECFKGIHRALKKGGVFVGYEWVVLPERGYDAKNSDHVRVKEGIEVGNGLPTLATAAEITEALEKSGFKVAEAFDANRGVHSPNEIPWYDTLCGSFTIAGFRMTRVGRMCTHAMVTMLEMARIAPRGSVKVSALLNATALDLVEAGQKELFTPSFFFMAVKE 401
[Close]
BLAST of mRNA_H-paniculata_contig202.5211.1 vs. uniprot
Match: A0A7S3M907_9STRA (Methyltransferase (Fragment) n=2 Tax=cellular organisms TaxID=131567 RepID=A0A7S3M907_9STRA)

HSP 1 Score: 425 bits (1093), Expect = 1.610e-138
Identity = 216/376 (57.45%), Postives = 267/376 (71.01%), Query Frame = 2 
Query:  152 QPSAMVEKALDAARDNPRTSASVAAVAGVGMIYVLLAKHKTKRDGMDYKSMYGVT-HMLNNAESVLQRNDVKDAIDGYEELFTGARKEHGAITTEESIKRRQTEYQKMVNSFYNLVTDFYEWGWGQSFHFAPRRKDETFRESIRRAEYVLASRIEVRPGSKVLDVGCGVGGPMRNIAVFGDCEVTGITINQYQVNVGNKYNSEAGLAECCRSTQGDFQTLPFPAAQFDAAYQIEATCHSPDKVQVFREVCRVLKPGSMFGGYEWVVTEKYDCSNPDHVRLKEGIEVGNGLPTLATPAIIKANLEEAGFEVVYAYNANEGAHDKMEIAWYQTLCGSFSLSGFRMTHFGRVCTHGLVCALEMLRIAPKGSGQVSTLLN 1276
            Q   ++ KA     +NP    + A VA    I+ L  +    RDG DY S +G    +LNNA+  L+ ++  D+I  YE +F+GAR+E GAIT+EESI+ R+ +Y  MVN FYNLVTDFYE+GWGQSFHF PR  +E F ESI+RAEY L SR+ ++PG KVLDVGCGVGGPMRN+A+F    + GITIN YQV VGNK N+  GL+  C+  QGDFQ LP+    FDAAY+IEATCHSPD+V  F  V RVLK G +F GY+WVVT+KY+  N DHVR+KEGIEVGNGLPTLATP  I   LE+AGFEV+  Y+AN+G HD  ++ WY+TL G  +LSGFRMTH GR+ TH  V  LE+LRIAP GS +VS LLN
Sbjct:    7 QVEQIIAKATKFTEENPVAVGASAVVALATSIF-LFRRSNMNRDGADYNSTFGAAGKILNNADHNLKGSEFHDSIADYENMFSGARQETGAITSEESIEVRKKKYADMVNHFYNLVTDFYEYGWGQSFHFGPRWHNEEFMESIKRAEYHLCSRLGMKPGMKVLDVGCGVGGPMRNMAIFSGSNIEGITINNYQVKVGNKNNASNGLSHLCKLVQGDFQNLPWADGYFDAAYEIEATCHSPDRVVTFGGVARVLKKGGLFAGYDWVVTDKYNPDNKDHVRIKEGIEVGNGLPTLATPEHIVDCLEKAGFEVLDHYDANKGVHDANQLPWYETLNGKLTLSGFRMTHLGRMVTHSFVWTLELLRIAPAGSTRVSALLN 381
[Close]
BLAST of mRNA_H-paniculata_contig202.5211.1 vs. uniprot
Match: A0A1V9YY29_9STRA (Methyltransferase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YY29_9STRA)

HSP 1 Score: 430 bits (1106), Expect = 3.350e-138
Identity = 213/366 (58.20%), Postives = 264/366 (72.13%), Query Frame = 2 
Query:  257 LAKHKTKRDGMDYKS-MYGVTHMLNNAESVLQRNDVKDAIDGYEELFTGARKEHGAITTEESIKRRQTEYQKMVNSFYNLVTDFYEWGWGQSFHFAPRRKDETFRESIRRAEYVLASRIEVRPGSKVLDVGCGVGGPMRNIAVFGDCEVTGITINQYQVNVGNKYNSEAGLAECCRSTQGDFQTLPFPAAQFDAAYQIEATCHSPDKVQVFREVCRVLKPGSMFGGYEWVVTEKYDCSNPDHVRLKEGIEVGNGLPTLATPAIIKANLEEAGFEVVYAYNANEGAHDKMEIAWYQTLCGSFSLSGFRMTHFGRVCTHGLVCALEMLRIAPKGSGQVSTLLNKTAIDIVDAGKLEIFTPSYFFAARK 1351
            +A + T RDG D+++ + G T +L+N +SVL R+ V    + Y++LF GARKE GAI+TEESIK RQ+EY+ MV+SFY+LVTDFYE+GWGQSFHFA R +DETFRESIRR EY L+ ++ +  G   LD+GCG+GGPMRNIA F   ++ GITIN+YQV V N+ N + GL E C   QG+F  +PF ++ FD+ Y IE+ CH+PDK   F E CRVLKPG +F G +W V   YD  N  HV LKEGIEVGNGLPTL TPA I   LE+AG EV+  Y+  +   D  EI WY TL GS +L GFRMT  GR CTH LV  LE L+IAPKG+ +VS +LNKTA DIV AGK++IFTPSYFF ARK
Sbjct:  166 VANNTTSRDGSDFQTTLLGSTRLLSNPDSVLSRDAVNSRFENYDKLFAGARKEAGAISTEESIKLRQSEYKLMVDSFYDLVTDFYEYGWGQSFHFANRFRDETFRESIRRVEYFLSGKLGLSKGKYALDMGCGIGGPMRNIARFSGAKIKGITINEYQVRVANRNNKQNGLEEQCHVQQGNFMEMPFESSTFDSIYAIESVCHAPDKKACFSEACRVLKPGGVFVGLDWAVLNHYDPKNMHHVELKEGIEVGNGLPTLETPAQIAKALEDAGLEVLEHYSLQDNYRDPREIPWYSTLEGSMTLQGFRMTWLGRQCTHVLVSVLEFLKIAPKGTVKVSLMLNKTADDIVAAGKMDIFTPSYFFMARK 531
[Close]
BLAST of mRNA_H-paniculata_contig202.5211.1 vs. uniprot
Match: F0Y1S6_AURAN (SAM_MT_ERG6_SMT domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y1S6_AURAN)

HSP 1 Score: 426 bits (1095), Expect = 3.410e-138
Identity = 215/373 (57.64%), Postives = 266/373 (71.31%), Query Frame = 2 
Query:  317 HMLNNAESVLQRNDVKDAIDGYEELFTGARKEH---------GAITTEESIKRRQTEYQKMVNSFYNLVTDFYEWGWGQSFHFAPRRKDETFRESIRRAEYVLASRIEVRPGSKVLDVGCGVGGPMRNIAVFGDCEVTGITINQYQVNVGNKYNSEAGLAECCRSTQGDFQTLP-FP---------------AAQFDAAYQIEATCHSPDKVQVFREVCRVLKPGSMFGGYEWVVTEK--YDCSNPDHVRLKEGIEVGNGLPTLATPAIIKANLEEAGFEVVYAYNANEGAHDKMEIAWYQTLCGSFSLSGFRMTHFGRVCTHGLVCALEMLRIAPKGSGQVSTLLNKTAIDIVDAGKLEIFTPSYFFAARKK 1354
            +ML+N +SVL R  V++++D Y  LF G   +H         GA+T+ ESIK+RQ  Y+ MVN+FY+LVTDFYE+GW QSFHFAPR + ETF ESI+RAEY L SR+ ++PG K LDVGCGVGGPMRN+A+F    + GITIN+YQV VGNKY+++ G+A+   +T+GDFQ LP F                  +FD AY+IEATCHSPDK + F EV R LKPG +F GYEWVV     YD +NP HV +KEGIE+GNGLPTLATP  + A LE AGFEV+  Y+AN   H  +EI WY TL G F+LSGFRMT+ GR CTH +V ALE LRIAPKG+  VS +LN TA+D+V+ GK E+FTPSYFF ARKK
Sbjct:   52 NMLSNGDSVLAREKVENSMDEYAALFEGQTGKHSANGLTDEKGAVTSAESIKKRQEGYRTMVNNFYDLVTDFYEYGWCQSFHFAPRWQGETFLESIKRAEYHLCSRLGMKPGVKALDVGCGVGGPMRNMAIFSGASIEGITINEYQVKVGNKYHAQQGVADIAHTTRGDFQNLPGFTNGELWEGIDYGDMDWTGKFDVAYEIEATCHSPDKTRCFSEVARCLKPGGLFAGYEWVVLPDRGYDGANPTHVAIKEGIEIGNGLPTLATPEKVVAALEAAGFEVLEHYDANRNVHSPVEIPWYDTLNGKFTLSGFRMTNLGRNCTHAMVTALETLRIAPKGTTHVSAMLNATALDLVEGGKQELFTPSYFFVARKK 424
[Close]
BLAST of mRNA_H-paniculata_contig202.5211.1 vs. uniprot
Match: A0A485LC91_9STRA (Methyltransferase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LC91_9STRA)

HSP 1 Score: 429 bits (1102), Expect = 9.590e-138
Identity = 214/362 (59.12%), Postives = 260/362 (71.82%), Query Frame = 2 
Query:  269 KTKRDGMDYKS-MYGVTHMLNNAESVLQRNDVKDAIDGYEELFTGARKEHGAITTEESIKRRQTEYQKMVNSFYNLVTDFYEWGWGQSFHFAPRRKDETFRESIRRAEYVLASRIEVRPGSKVLDVGCGVGGPMRNIAVFGDCEVTGITINQYQVNVGNKYNSEAGLAECCRSTQGDFQTLPFPAAQFDAAYQIEATCHSPDKVQVFREVCRVLKPGSMFGGYEWVVTEKYDCSNPDHVRLKEGIEVGNGLPTLATPAIIKANLEEAGFEVVYAYNANEGAHDKMEIAWYQTLCGSFSLSGFRMTHFGRVCTHGLVCALEMLRIAPKGSGQVSTLLNKTAIDIVDAGKLEIFTPSYFFAARK 1351
            +T RDG D+ + + G T +L+N +SVL R+ V    + Y++LF GARKE GAI+TEESIK RQ+EYQ MV+SFY+LVTDFYE+GWGQSFHFA R KDETF+ESI+R EY LA ++ +   S  LD+GCG+GGPMRNIA F   ++ G+TIN+YQV V NK N + GL + C   QG+F  +PF A  FD  Y IE+ CH+PDK   F E CRVLKPG  F G +W V   YDC N  HV LKEGIEVGNGLPTL TPA I   LE+AG EVV  Y+  +   D  EI WY+TL G ++L GFRMT FGR CTH LV  LE L+IAPKG+ +VS +LNKTA DIV+AG+  IFTPSYFF ARK
Sbjct:  164 QTHRDGSDFATTLLGSTRILSNPDSVLGRDAVNQRYETYDKLFNGARKETGAISTEESIKLRQSEYQVMVDSFYDLVTDFYEYGWGQSFHFANRFKDETFKESIKRVEYWLAGKLGLNKDSYALDMGCGIGGPMRNIARFSGAKIKGLTINEYQVRVANKNNVQNGLEKQCHVQQGNFMEMPFEANTFDGIYAIESVCHAPDKKACFTEACRVLKPGGTFVGLDWAVLNDYDCKNERHVALKEGIEVGNGLPTLETPAQIAQALEDAGLEVVTHYSLQDNYRDPNEIPWYETLEGKWTLQGFRMTWFGRQCTHALVTTLEFLKIAPKGTVKVSLMLNKTADDIVEAGRANIFTPSYFFMARK 525
[Close]
BLAST of mRNA_H-paniculata_contig202.5211.1 vs. uniprot
Match: A0A4D9D589_9STRA (Methyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D589_9STRA)

HSP 1 Score: 424 bits (1090), Expect = 9.970e-138
Identity = 205/377 (54.38%), Postives = 268/377 (71.09%), Query Frame = 2 
Query:  227 VAGVGMIYVLLAKHKTKRDGMDYKSMYG-VTHMLNNAESVLQRN-DVKDAIDGYEELFTGARKEHGAITTEESIKRRQTEYQKMVNSFYNLVTDFYEWGWGQSFHFAPRRKDETFRESIRRAEYVLASRIEVRPGSKVLDVGCGVGGPMRNIAVFGDCEVTGITINQYQVNVGNKYNSEAGLAECCRSTQGDFQTLPFPAAQFDAAYQIEATCHSPDKVQVFREVCRVLKPGSMFGGYEWVVTEKYDCSNPDHVRLKEGIEVGNGLPTLATPAIIKANLEEAGFEVVYAYNANEGAHDKMEIAWYQTLCGSFSLSGFRMTHFGRVCTHGLVCALEMLRIAPKGSGQVSTLLNKTAIDIVDAGKLEIFTPSYFFAARK 1351
            V G+ ++ + + +   +RDGMDYK     V  ++ N++    ++ DV  ++  Y  LFTGAR   G I+T+ SIK RQ  YQK+V +         E+GWGQSFHF PR + E+F ESI+RAEY L SR+ ++PG +VLD+GCGVGGPMRN+A+F   ++ GITIN+YQV++GNKYN++ GLA+ C++ QGDFQ LP+PA  FDAA+ +EATCHSPDK   F E  RVLKPG +FG YEW+VT+K+D SNP+H R+KEGIEVGNGLPTLAT   + A +  AGFEV+ AY+AN   H   +I WY+ L G  S SGFRMT  GR+ TH  V  LE  RIAP G+G++S +LN TAID+V+ GK EIFTPS+FF ARK
Sbjct:   26 VIGLTVVVLRVRRVNLRRDGMDYKGTAADVLKIMKNSDFEAHKDKDVHSSVSEYASLFTGARASVGRISTDASIKTRQANYQKLVTNXXXXXXXXXEYGWGQSFHFGPRWQGESFVESIKRAEYHLCSRLGLKPGMRVLDMGCGVGGPMRNMAIFSGAKIDGITINEYQVSIGNKYNAQRGLADQCQARQGDFQNLPWPANSFDAAFAVEATCHSPDKRMCFSEAFRVLKPGGLFGNYEWIVTDKFDASNPEHTRIKEGIEVGNGLPTLATAEQVLAAVRAAGFEVLDAYDANADVHSPHQIPWYEPLTGKLSWSGFRMTWLGRIMTHAFVTVLEAARIAPTGTGKISGILNATAIDLVEGGKAEIFTPSFFFVARK 402
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig202.5211.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KN25_9PHAE5.760e-22580.40Methyltransferase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A835YJE1_9STRA1.420e-16162.47Methyltransferase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A7S2PD46_9STRA2.920e-14660.31Methyltransferase n=1 Tax=Skeletonema marinoi TaxI... [more]
A0A1Z5JVH4_FISSO1.170e-14357.81Methyltransferase n=2 Tax=Fistulifera solaris TaxI... [more]
A0A7S1YWV2_9STRA1.260e-14060.34Methyltransferase n=1 Tax=Ditylum brightwellii Tax... [more]
A0A7S3M907_9STRA1.610e-13857.45Methyltransferase (Fragment) n=2 Tax=cellular orga... [more]
A0A1V9YY29_9STRA3.350e-13858.20Methyltransferase n=1 Tax=Thraustotheca clavata Ta... [more]
F0Y1S6_AURAN3.410e-13857.64SAM_MT_ERG6_SMT domain-containing protein n=1 Tax=... [more]
A0A485LC91_9STRA9.590e-13859.12Methyltransferase n=1 Tax=Aphanomyces stellatus Ta... [more]
A0A4D9D589_9STRA9.970e-13854.38Methyltransferase n=2 Tax=Monodopsidaceae TaxID=42... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig202contigH-paniculata_contig202:36389..44205 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score651.4
Seed ortholog evalue3e-184
Seed eggNOG ortholog2880.D8LBF8
KEGG rclassRC00003,RC01154
KEGG koko:K00559
KEGG ReactionR04427,R07481
KEGG Pathwayko00100,ko01100,ko01110,ko01130,map00100,map01100,map01110,map01130
KEGG ModuleM00102
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0032259,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044260,GO:0048580,GO:0050789,GO:0050793,GO:0051239,GO:0061062,GO:0061065,GO:0065007,GO:0071704,GO:2000026
EggNOG free text desc.sterol 24-C-methyltransferase activity
EggNOG OGsCOG0500@1,KOG1269@2759
Ec32 ortholog descriptionSterol methyltransferase
Ec32 orthologEc-27_004130.1
EC2.1.1.41
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons9
Model size2570
Cds size1263
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929520.4257326-UTR-H-paniculata_contig202:36388..364821622929520.4257326-UTR-H-paniculata_contig202:36388..36482Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig202 36389..36482 +
1691480896.5604167-UTR-H-paniculata_contig202:36388..364821691480896.5604167-UTR-H-paniculata_contig202:36388..36482Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig202 36389..36482 +
1622929520.5877998-UTR-H-paniculata_contig202:42992..442051622929520.5877998-UTR-H-paniculata_contig202:42992..44205Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig202 42993..44205 +
1691480896.6661212-UTR-H-paniculata_contig202:42992..442051691480896.6661212-UTR-H-paniculata_contig202:42992..44205Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig202 42993..44205 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929520.4399989-CDS-H-paniculata_contig202:36482..366591622929520.4399989-CDS-H-paniculata_contig202:36482..36659Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig202 36483..36659 +
1691480896.5730152-CDS-H-paniculata_contig202:36482..366591691480896.5730152-CDS-H-paniculata_contig202:36482..36659Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig202 36483..36659 +
1622929520.4594193-CDS-H-paniculata_contig202:37172..373131622929520.4594193-CDS-H-paniculata_contig202:37172..37313Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig202 37173..37313 +
1691480896.5842564-CDS-H-paniculata_contig202:37172..373131691480896.5842564-CDS-H-paniculata_contig202:37172..37313Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig202 37173..37313 +
1622929520.4730878-CDS-H-paniculata_contig202:37695..377631622929520.4730878-CDS-H-paniculata_contig202:37695..37763Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig202 37696..37763 +
1691480896.5976791-CDS-H-paniculata_contig202:37695..377631691480896.5976791-CDS-H-paniculata_contig202:37695..37763Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig202 37696..37763 +
1622929520.489231-CDS-H-paniculata_contig202:38307..384401622929520.489231-CDS-H-paniculata_contig202:38307..38440Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig202 38308..38440 +
1691480896.6060143-CDS-H-paniculata_contig202:38307..384401691480896.6060143-CDS-H-paniculata_contig202:38307..38440Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig202 38308..38440 +
1622929520.506864-CDS-H-paniculata_contig202:39011..391251622929520.506864-CDS-H-paniculata_contig202:39011..39125Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig202 39012..39125 +
1691480896.6140769-CDS-H-paniculata_contig202:39011..391251691480896.6140769-CDS-H-paniculata_contig202:39011..39125Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig202 39012..39125 +
1622929520.5227504-CDS-H-paniculata_contig202:40141..402881622929520.5227504-CDS-H-paniculata_contig202:40141..40288Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig202 40142..40288 +
1691480896.6220174-CDS-H-paniculata_contig202:40141..402881691480896.6220174-CDS-H-paniculata_contig202:40141..40288Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig202 40142..40288 +
1622929520.540851-CDS-H-paniculata_contig202:41478..416791622929520.540851-CDS-H-paniculata_contig202:41478..41679Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig202 41479..41679 +
1691480896.6300275-CDS-H-paniculata_contig202:41478..416791691480896.6300275-CDS-H-paniculata_contig202:41478..41679Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig202 41479..41679 +
1622929520.5569751-CDS-H-paniculata_contig202:41917..421001622929520.5569751-CDS-H-paniculata_contig202:41917..42100Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig202 41918..42100 +
1691480896.640621-CDS-H-paniculata_contig202:41917..421001691480896.640621-CDS-H-paniculata_contig202:41917..42100Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig202 41918..42100 +
1622929520.5727072-CDS-H-paniculata_contig202:42893..429921622929520.5727072-CDS-H-paniculata_contig202:42893..42992Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig202 42894..42992 +
1691480896.655345-CDS-H-paniculata_contig202:42893..429921691480896.655345-CDS-H-paniculata_contig202:42893..42992Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig202 42894..42992 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig202.5211.1prot_H-paniculata_contig202.5211.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig202 36483..42992 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig202.5211.1

>prot_H-paniculata_contig202.5211.1 ID=prot_H-paniculata_contig202.5211.1|Name=mRNA_H-paniculata_contig202.5211.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=421bp
MSLPLPLSLIKPPGMMRGMQPSAMVEKALDAARDNPRTSASVAAVAGVGM
IYVLLAKHKTKRDGMDYKSMYGVTHMLNNAESVLQRNDVKDAIDGYEELF
TGARKEHGAITTEESIKRRQTEYQKMVNSFYNLVTDFYEWGWGQSFHFAP
RRKDETFRESIRRAEYVLASRIEVRPGSKVLDVGCGVGGPMRNIAVFGDC
EVTGITINQYQVNVGNKYNSEAGLAECCRSTQGDFQTLPFPAAQFDAAYQ
IEATCHSPDKVQVFREVCRVLKPGSMFGGYEWVVTEKYDCSNPDHVRLKE
GIEVGNGLPTLATPAIIKANLEEAGFEVVYAYNANEGAHDKMEIAWYQTL
CGSFSLSGFRMTHFGRVCTHGLVCALEMLRIAPKGSGQVSTLLNKTAIDI
VDAGKLEIFTPSYFFAARKK*
back to top

mRNA from alignment at H-paniculata_contig202:36389..44205+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig202.5211.1 ID=mRNA_H-paniculata_contig202.5211.1|Name=mRNA_H-paniculata_contig202.5211.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7817bp|location=Sequence derived from alignment at H-paniculata_contig202:36389..44205+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATCAAATCCGGTGACTTCGCACAACGTGTGTCTCGGCGGTTCACGGTTGC
CTCGTTCTCTGTCTCTCCATGTCTGTCTGTCCTTGTCTCTGTCTATGTCT
CTGCCTTTACCTCTCTCTCTTATAAAACCCCCAGGAATGATGAGGGGCAT
GCAGCCATCGGCCATGGTGGAGAAGGCGTTGGATGCTGCTAGAGACAACC
CACGCACTTCAGCGTCCGTTGCTGCCGTAGCTGGCGTGGGCATGATTTAT
GTCTTGTTGGCAAAACACAAGGTAAGGCGAGGTGAACAAAATTGGCTAAG
GCCGGGCATGAGGAGCGAGCTCACAACATTTTCATGTTGCCTTCAGCGTT
GCTTAGTTGCAAAAGCGTTTCTGTCGGCGTATTCTCGCAGATGGCGTTGC
CTTGGATCCTTTTTTTGCCCCAGTTTGAGTAGCAAAGGACCCCAATAGTT
GCAGAACTGGAGTACCTTCTACACTGTCTGTCAACAGAACATCTTCGTTC
GCGCATAGCAGACGGATGTGGCCTTCGGTACACTTTACGCTCTATGCACA
CCAAGCGCGATGGCATGGGTTACCCAATGTATGGAGTTGAGCACGACCAC
TCTACATTCAGTTCATGGCTTATTTATTGATTACAAAATGGCTGCTGTCG
GCATATGGGTGCTCGCTGACTGCGTATTTTGACGGCGATTTTTAGATCTG
TTTCGCCGCTAGTTTTTACCAAGAGTTTACCCATGAAAATACTTCAATTC
TGTTGCCGTGCACTGTCACGATGTGATGATGCAGACCAAGCGTGATGGTA
TGGACTACAAGTCAATGTATGGGGTGACACACATGCTCAACAATGCCGAG
TCCGTGCTCCAGAGGAATGATGTGAAGGATGCTATTGATGGTTACGAAGA
ACTTTTTACCGGTGCTCGCAAGGAGGTAAGATGAAGATCCTGCTCGGATC
TCCTTTTTGTTGTCAGTACTCGTACGTGAAATGAGACGCTGTATGCATCG
ACAGCAACGTTGTTCCGTCAACAGTATCTTTCTTCCTTCCGTGGGGCTAG
TTCAGTTTAATGGAATAATCTTTTTCTGAGGTTGTGGGTATACGCGCCGG
CAACGAGTTGATACAAAGTGTTGGTGATATAATACGATACCGACAGCTGG
CACATTGTCTTGCTTGCCTCGTCACGCCTTGTAGACCCCCAACCAAAGCT
ACTAAAGGTGTATTTTCCAGATGCATCATCTCATCTATCCTCCTATTTGC
TTTCCTCGGGATATGTTGTCCTGCTGGAATCATCGACATGTTGGCTTCAA
TCACCAGCACGGCGCTATTACCACAGAAGAAAGCATCAAGAGACGGCAGA
CAGAGTACCAGAAGATGGTAAACAGGTGAAAATCGTCGAATCATGTTTAT
TAGCAATCTCTTGCCTGGTGAAACATGACCGGAAGTACCGCTTATTGTTA
CATTCGCCACCTGACTCCACATGATGATCTCACACGCGCATGACACTGGA
ATCGATCACTTATCATCAGATCTTGCCCTACTATACCATATCGTGTCGTA
CCGTGTCGTGGAGATCATTACTTACCAAACGACATCTCTGATGCGACATT
TTGTAGCTGGATGGCGAGGGTCGACGTCATCGGAAGCAGCAGAACCTCGA
ATGCCTCCGATGGGTAGAGTAAGGTAGTAGTACTACATGTAGCATGTCCA
CACTCTTAATGCCGAGTATCATAAATTCAGTCATGTACGTGTGAAATTTA
CTAGTATTGTCGATGACCTGAGCCATGTCGGTAGTTTAATCGTCAATCGC
GATGGGTTCGGGATGCAAACATACATAACTTCTCTTGGATCCTGTTGTCC
GTTTGGGTCCATGATGCCCTCTTCCCTCATGTCTTTTGCCCCCGTACATC
TCGGTTGGAATGGAGCCAGCTTCTACAATCTCGTCACAGATTTCTATGAG
TGGGGATGGGGACAATCCTTCCACTTCGCCCCACGCCGCAAGGACGAAAC
TTTTCGCGAGTCTATCCGGCGTGCAGAGTACGTGCTGGCTAGCCGCATTG
AGGTGCGTCGGCGTTATGTTGATGTGTTGGCCGTTGCTACGGTTCAAAAT
TCTGAAGCAGAAGTCCGACGTGTTTATTCATGACCATACGACTGGCCCAA
GAGTTCAAATGCACTTTTGAATGCCCTCACCGGAAATGGTAGTGTTTGAT
GAAATAGCACGTTCTTGCTGTGTTTTTTACACACCAAAGAGCCATGATGC
CTAGTTTTCGTCGCCTTCTTGTATATGGGTTTGCTCAAGATGTTTTTTTA
ACGATACGGGTTGCTTCGGTGGGGATATATATTTGCTTCACACCATCACT
CTCTTCGTTGTTCGTAGGCATACACTATTGATCAAACGGGACAAAACCGT
TAAATAGTTGGATAGGACGAATATGGTACATGAATAATATGCCTCCCCCG
CCCAGTATCTTGGCAGCCAATGACCACAATGCCAGCCCACCACGCTGAAA
TCATCTCGCTCACCGCGTTGTCCGGCACCGGCGAAGTTGTGACCATCCTT
GTTTCTACGCTTGTGTTGTGCGGCTGACGTAGCTAAATGTTTTCATCCCT
ACCTCACCCAACGTTTAATTCAGGTTAGACCCGGGAGCAAGGTCTTGGAT
GTTGGGTGTGGTGTCGGCGGACCCATGCGCAATATTGCCGTCTTCGGAGA
TTGTGAGGTTACAGGCATCACGATTAACCAATACCAGGTCAGCGTTGGTG
TACTGTCTGCGATGAATGGAGCGCTTCAGCGATGAAACAACGAAACCGAA
CTGGCTGATCGCTAGGTCGACTCCCCCTGACTTCTCAAGCCTGACGCGCG
AGCACCGCCTCTGTCGTCTGGCATGTGGCACTTTTGCTCTATTCCCGGAG
ATGGTGTCAATACAAACAAAATGATGGACTAGAGAACTGCATGGGGTTTT
TTGCTGAGTGTTTTCGATTCACCCAGCTCTATACATGCTGTGAACATCTG
AAAGTAGATGTGACCGATGCGTTCGTGTCAAATGTCTACACTTTTCCACA
AGGTGTTCATTTCGTATCGAATGCTTTAGTAGAAATAATAATGTACCCAA
GAAATATACAACTATATTTTATTTTTTGCCTTTCCTGAAGCGCATCGGGG
ATTTACACTGACTCTCAGGACATGAACCTGATAAGTAGGAAAGTGCTCTA
AAACGCCGATAAGAAAAAGAATACTTCGTGTTGCTATGAGGCACGAGCAC
CTTTCAGGATGATGGTGTCCACGTTATTTTTAAAGTCCGTGATTGATTCA
ATTTCATGTTGAGACATCGCGGGATGCTTCGTCCTGCCTGTGCCACGTGC
TGCGGACCCAAGATTGACATGTCAAGGCCACGGTCACATACATGATCAAA
AATGGCAAATGCCACCTATGTACCAGGTACCTTCTATCGTCGCTGTGAAG
TAGATCCCTCTCTTGGGACTGTACAGGCCTCAGGCTCCAACTCGTGGGAG
CACTGTGATGTATGTGATGTCTAGATGCTCGCGCATCAGATGTAAGAGCT
TTCGAATCTCGAATCTCGTGCAGCAGCGTGCGACAAAAGCATATGTGTGA
TGCTCACTTTCTCCGTCTTGTAAGTCTCGTCGATGAATGCTCTACATGAC
ATTTATGACCTCGAATTTCTAGTTTTATTACTTACTAAAACAGTAACTGA
CCGTCATATTTGGGCTTAAGCTGTGTTTCACCTACTTGTTGTTTTTTGTC
TAGGTGAACGTGGGGAACAAGTACAACAGCGAGGCGGGCCTGGCTGAGTG
CTGCAGGTCTACGCAGGGCGATTTTCAGACACTCCCTTTTCCCGCTGCGC
AGTTTGATGCGGCATACCAGATTGAGGCGACGTGCCACTCACCTGACAAG
GTAAGAGGAGTCACTTACTTCGTCGGGCATCTCTACGTACGTTTCGTCCA
CCTGTTGAAAATAAAGAAACTACGAACTCGGGGTACCATCACGTCTGTGG
TATGATTTGCTTTTGTTGCCGTCGACGTATGTTCGTGTAAAGCTTGCAAG
AATCGTCCGCGTGTTGCAGTACCGTTGGGGCGCGCCGGGTACCAAGTATG
GAATAGCCACTGTGTACCTCCACTTCTATGCCATATTCCAAATTTGGCCA
TCTCTTACGGGGTCGAATTTTTCCAGTCGAATACAGATTTTCGAATTTTT
CGACTCCAAGAAAATTTGATTTCGCATGTTATGCGGTTGAATTTCTTGGA
AATCTGAGTTGAAAACTCCGAGACGGGAAGTACAGCCGATCCCATTCCCC
GATTTCTGGCAGAAATCAGAGTTGCCCTCGTGTATCGAATTTCTTGGACT
ACCACCACATGAAGGCGTTAATGTTGTTTTTCATGCAACGTTTGAATGTC
ATGGCCTATGGCAATACACAAACCACGTGGATATAGGCAAGCCAAGGTGT
GTGATCCCCGCCGCCATATAGAACTTGTGAGACTGCTTGCCAGGGGGTTT
CTTCCACCCAGCGGAGGAAGCTGTGAACGGCGATCTTATAGTACAATTGA
ACCGCGGCCTTGTTCTTGTTGGCCTGAGACATGATCCCATCGTTCTGCCT
CATACCCGTACAAGCGTACCAAGTTAGTACACTTTGCAGTATCATCCCCT
GTGCCTTTCTAAGAGCCGAGACGATCCTCTGAGCCTTCACCTCATTCCAC
ACCCATTCCATGCATGGGTTCGTCGTAAGATGCATCGCAGGTGACAGTAC
ACACATGATTGTATGCTCTTTAAATGTTGACGTGAGTGTTGCTGGAGGGT
GTACAGGAGGGTGGCGTATATGAGGGTGATGTCTTGGGTGGTGTGCTCGA
GGACCCCACATTGGAGGGTGTGTTTGAAGTTTAAATTATGCCGCTTGTAC
TACGCCTGCAAATTTCCATAAAAACGCCACCTTCGGGAAATCCGACCCCA
CAACAAACGCGAACCGAATATTGAAGATCAGAATTTTGCACCCTTCGAGA
AATCGGAAAGTGGAGAAATTTGACTGGAAAAGTCCGACCTCATAAGAGAT
GGATGGTGCTTGCCTCATCGCCGCATACCGTCGCTCGCAGGTGCAAGTAT
TCCGTGAAGTATGCCGTGTCCTGAAGCCGGGAAGTATGTTTGGAGGCTAT
GAGTGGGTAGTCACGGAGAAGTATGACTGCAGCAATCCCGATCATGTGCG
GCTGAAGGAAGGTATCGAGGTGGGAAACGGTTTACCTACTCTAGCCACCC
CCGCCATCATCAAGGCGAATCTGGAAGAAGCTGGGTTTGAGGTATGTTCG
ATGTGATGGTAATATTGCGAATAACCGTCCCCGTATCTTCTCTGGAACGT
ACGCTCTGTGAAATAATGTTCCATCACCAAATATTTTGTTAGCTCGTTCT
GCCATTTAAAGCTGTGAATTGGTTCTGAAGACCACACTGCCCATAGCCTA
CGTTCATCGATCTATTGCCTACAGTCAACATTTAGTAATTTTGGCTGTCA
ATTGCGTGTCCGTCCACTCTGCTTGGCAGGTGGTTTACGCCTACAATGCC
AACGAGGGTGCCCACGATAAAATGGAGATAGCGTGGTACCAGACCCTTTG
CGGGAGCTTCAGCCTTTCTGGATTCCGAATGACGCACTTCGGCAGAGTAT
GCACGCACGGGCTTGTATGTGCCTTGGAGATGCTACGCATCGCCCCTAAG
GGATCGGGTCAGGTGCGACGAGCCTTGTCGGTTTTTACACATTTCAACAG
TTGCGAGAGCCGTGATCTCTTGCTCGCTCCTCCTTGGTAATGCCTGTGTG
ATCGAGTAAGTGGCTGTTTGATGGTGTGCGTCCGTCCTTGCATACTAGCA
CTGACCAAGAGCCTGTGAACTGGTTGTATTAAGCAATTATGCTGAATTGT
TGAATGCATATATATTCCCAAGGTTGATTGTGTTAAGAAGTGTGGATGGG
CTACGAATATAGTTTGTGGTTATCGTGCTTCTTTCCTAAGACTCTCTCGT
CATTGGTGGCGAAAGGCAATTTAAACGAATGTCAACCTTACATATCTGGG
GTGCTGGAAACAGTTATGTCAAATGAAGATAATTTCGGCTTCATTCCAGG
CGTAATTTTGGCCGCTTGAAGATGACACTCTTTTCCATGTCCGGAATCGT
TGAGTAGAGGCGTGATGAGTAAATTGCTACAGTCCTCAAAATAACAGGGT
GTGCGTTGTTCGGGTAAGTTTAACTTGCCTTGCGTTCTGTCGCCTACATG
AGATGATTCCCGTATTAGTCGGAAGTCCGATTAATAATCCAGGTGCATCA
TGGTGACACTCATTTTTGTGGAAACTGTTATGATCATCCACAGATAAGCT
CGGCTGGCCCACTTTTCGCCTGGACGTTCCCCTGTGTCATCAGTGCTGCT
GGAGTGACATTGCTCCCCCATCAAGCCGTTTCGTCCTAATCTCCTTTTGC
TGGTGATATTTTGCGTTGTGCGCTTGATAATGCTTCGTGTGCGTCTTGCT
TCAAGGTCTCTACGCTCCTGAACAAAACAGCGATCGACATCGTTGACGCC
GGCAAGCTCGAGATCTTTACGCCGAGCTACTTTTTTGCTGCCAGGAAGAA
GTAGTTGCTGGTTCGGTACCACGTATTTTTGTTATTCGTTGGGTCAATCC
TGGCGCGTTGACGAGGACGATCATGTCCACGAACAACCGATGGGGATGTC
TTTTTGTAGCTTGTAGCACGCGCTATTCCCTTGGGGGTGGCGAAACTACG
TATTAGGCATTTGTGCCATCGTGCACCGTCTTTGACGTCCCACTTGCCGA
GCTGTCAAATATCTGGCTCTCGTTGTGGAAGCGCAATGGGTTCGTCCTTG
CCACAGTTCGCCCTGACGCTGCTCCTGTATACTGTTGTTTAGTGGAGGAT
GGGTCTTGCTTGGGCCCCACGATAGTCTAGTTTCTAGCAATGGAGATTGT
GCTGAACGTTGTTTTTAACTTTTTGCGTCAACTACCAGACCTTCAGTTCG
TGCTCTGTCGCTGTTCATAATCCGGCTTCGTAAATTAGGATGTGTCCAGC
GCAGGTTCGCCTCACGCTATTCCGGGCAATCTAGTACTGTGTGGCTTTGT
GGCGTCGGCAATGGTTGTATGTGACGGGTTGTTACTGTAGTTGGACAGCT
AGAATAGTATCAAGCAATTTTCCTTGTACATGGCATATAGCACGGCCCGC
GAGCCAGGCGCATGCAAGACTGGCGAAAATTGTCAGTACTGCTATCTGGC
GCGTGTAGGTGTCTAGAATCGTTCGGTGCTGGAGTCACGACATCTGCGAC
TACTGGCCTTTTGGATGCGACAAGTGATGAAAGTGACGTGGAAATGGGTC
GTGGGTCGGGTTGTGTGGGCCTGGCTGCTGTTGAGGAGTAAATAGTGTGG
AGGATCCTGCAAGTCAGTGAGTGATCCCGTTTTTTTGGCGCTTGATGTCG
AGATATTATGAGGACGGTTAGGGCACGTCGGGCAGAGAAAAAGATAGGAG
CAATTTTAAAACGGCTTATGTAATTATTTGATTCCCTTGGCAATGGAACC
CACTTTTCTCATCAGCACCACGCACTGTCACGGTGTGTCGATTCTTTGCC
CTATATTATACTGTTGTTACCATTAAACGGTAGACCCCATTACATTCTGG
CAAATAAACAGATGAAGGAATATAACGCGAACAGACGGGGCATGAAGGCG
TAATCAGTCAGGTATGTTCGCGAGGTCCATGCGGTAACTGAAGTACAGTA
TAGTTAGGCGTCCTAGTCCGTTCTTGTGGGATACTTGCCTCCATTTAGGT
ATAATCCCAAATCCTCC
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig202:36389..44205+

>mRNA_H-paniculata_contig202.5211.1 ID=mRNA_H-paniculata_contig202.5211.1|Name=mRNA_H-paniculata_contig202.5211.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2526bp|location=Sequence derived from alignment at H-paniculata_contig202:36389..44205+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCTCTGCCTTTACCTCTCTCTCTTATAAAACCCCCAGGAATGATGAG
GGGCATGCAGCCATCGGCCATGGTGGAGAAGGCGTTGGATGCTGCTAGAG
ACAACCCACGCACTTCAGCGTCCGTTGCTGCCGTAGCTGGCGTGGGCATG
ATTTATGTCTTGTTGGCAAAACACAAGATGTCTCTGCCTTTACCTCTCTC
TCTTATAAAACCCCCAGGAATGATGAGGGGCATGCAGCCATCGGCCATGG
TGGAGAAGGCGTTGGATGCTGCTAGAGACAACCCACGCACTTCAGCGTCC
GTTGCTGCCGTAGCTGGCGTGGGCATGATTTATGTCTTGTTGGCAAAACA
CAAGACCAAGCGTGATGGTATGGACTACAAGTCAATGTATGGGGTGACAC
ACATGCTCAACAATGCCGAGTCCGTGCTCCAGAGGAATGATGTGAAGGAT
GCTATTGATGGTTACGAAGAACTTTTTACCGGTGCTCGCAAGGAGACCAA
GCGTGATGGTATGGACTACAAGTCAATGTATGGGGTGACACACATGCTCA
ACAATGCCGAGTCCGTGCTCCAGAGGAATGATGTGAAGGATGCTATTGAT
GGTTACGAAGAACTTTTTACCGGTGCTCGCAAGGAGCACGGCGCTATTAC
CACAGAAGAAAGCATCAAGAGACGGCAGACAGAGTACCAGAAGATGGTAA
ACAGCACGGCGCTATTACCACAGAAGAAAGCATCAAGAGACGGCAGACAG
AGTACCAGAAGATGGTAAACAGCTTCTACAATCTCGTCACAGATTTCTAT
GAGTGGGGATGGGGACAATCCTTCCACTTCGCCCCACGCCGCAAGGACGA
AACTTTTCGCGAGTCTATCCGGCGTGCAGAGTACGTGCTGGCTAGCCGCA
TTGAGCTTCTACAATCTCGTCACAGATTTCTATGAGTGGGGATGGGGACA
ATCCTTCCACTTCGCCCCACGCCGCAAGGACGAAACTTTTCGCGAGTCTA
TCCGGCGTGCAGAGTACGTGCTGGCTAGCCGCATTGAGGTTAGACCCGGG
AGCAAGGTCTTGGATGTTGGGTGTGGTGTCGGCGGACCCATGCGCAATAT
TGCCGTCTTCGGAGATTGTGAGGTTACAGGCATCACGATTAACCAATACC
AGGTTAGACCCGGGAGCAAGGTCTTGGATGTTGGGTGTGGTGTCGGCGGA
CCCATGCGCAATATTGCCGTCTTCGGAGATTGTGAGGTTACAGGCATCAC
GATTAACCAATACCAGGTGAACGTGGGGAACAAGTACAACAGCGAGGCGG
GCCTGGCTGAGTGCTGCAGGTCTACGCAGGGCGATTTTCAGACACTCCCT
TTTCCCGCTGCGCAGTTTGATGCGGCATACCAGATTGAGGCGACGTGCCA
CTCACCTGACAAGGTGAACGTGGGGAACAAGTACAACAGCGAGGCGGGCC
TGGCTGAGTGCTGCAGGTCTACGCAGGGCGATTTTCAGACACTCCCTTTT
CCCGCTGCGCAGTTTGATGCGGCATACCAGATTGAGGCGACGTGCCACTC
ACCTGACAAGGTGCAAGTATTCCGTGAAGTATGCCGTGTCCTGAAGCCGG
GAAGTATGTTTGGAGGCTATGAGTGGGTAGTCACGGAGAAGTATGACTGC
AGCAATCCCGATCATGTGCGGCTGAAGGAAGGTATCGAGGTGGGAAACGG
TTTACCTACTCTAGCCACCCCCGCCATCATCAAGGCGAATCTGGAAGAAG
CTGGGTTTGAGGTGCAAGTATTCCGTGAAGTATGCCGTGTCCTGAAGCCG
GGAAGTATGTTTGGAGGCTATGAGTGGGTAGTCACGGAGAAGTATGACTG
CAGCAATCCCGATCATGTGCGGCTGAAGGAAGGTATCGAGGTGGGAAACG
GTTTACCTACTCTAGCCACCCCCGCCATCATCAAGGCGAATCTGGAAGAA
GCTGGGTTTGAGGTGGTTTACGCCTACAATGCCAACGAGGGTGCCCACGA
TAAAATGGAGATAGCGTGGTACCAGACCCTTTGCGGGAGCTTCAGCCTTT
CTGGATTCCGAATGACGCACTTCGGCAGAGTATGCACGCACGGGCTTGTA
TGTGCCTTGGAGATGCTACGCATCGCCCCTAAGGGATCGGGTCAGGTGGT
TTACGCCTACAATGCCAACGAGGGTGCCCACGATAAAATGGAGATAGCGT
GGTACCAGACCCTTTGCGGGAGCTTCAGCCTTTCTGGATTCCGAATGACG
CACTTCGGCAGAGTATGCACGCACGGGCTTGTATGTGCCTTGGAGATGCT
ACGCATCGCCCCTAAGGGATCGGGTCAGGTCTCTACGCTCCTGAACAAAA
CAGCGATCGACATCGTTGACGCCGGCAAGCTCGAGATCTTTACGCCGAGC
TACTTTTTTGCTGCCAGGAAGAAGTAGGTCTCTACGCTCCTGAACAAAAC
AGCGATCGACATCGTTGACGCCGGCAAGCTCGAGATCTTTACGCCGAGCT
ACTTTTTTGCTGCCAGGAAGAAGTAG
back to top