prot_H-paniculata_contig20194.5207.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig20194.5207.1
Unique Nameprot_H-paniculata_contig20194.5207.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length248
Homology
BLAST of mRNA_H-paniculata_contig20194.5207.1 vs. uniprot
Match: D8LMQ2_ECTSI (Rab8E, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMQ2_ECTSI)

HSP 1 Score: 311 bits (798), Expect = 4.440e-99
Identity = 157/244 (64.34%), Postives = 195/244 (79.92%), Query Frame = 0
Query:    5 GFLSVGGGGNHRHGLRRGHQPPPRVHKIKLLMLGDSGVGKSSLMERFTEDNFNTSTVGTFGVDYKLKEVTINDELVMVQVWDTAGQQRFHKITQAYYRGSNAIVLVYDVANPETLGNIAYWMQSIRDNADSNRVQICLVGNKVDLRQEAGEAGENGASARMAQTRKGKEIADKFGADFFECSAKTGCRVEDAFVTVTTKAFEVYMLKPPTPSGRSKRHSIRRRKHQRQTSQGSDKDRPPRSEAS 248
            GFLSVGGG +  +G RRGH   P   KIKLLMLGDSGVGKSSLM+RF ED F+ + V T GVD+KLK + +NDE V +QVWDTAGQQ+FHKITQAYYRGS+ IVLVYD+++P+TL N AYWM+SIRD A SNRVQICLVGNKVDLR+E G  G+    A M +T  G+++A++FGA++FECSAKTGC VE+AF+   TKA+E +++KP TPS R +R  + R+KH+R  SQGSD+DRPPRS+AS
Sbjct:   28 GFLSVGGG-SQPYGARRGHGGAPPARKIKLLMLGDSGVGKSSLMDRFMEDYFSITKVQTLGVDFKLKTIVLNDEEVDLQVWDTAGQQKFHKITQAYYRGSHGIVLVYDMSDPKTLDNTAYWMRSIRDTAGSNRVQICLVGNKVDLREEVGLEGQQQDLAGMVETSTGRKVAEEFGAEYFECSAKTGCMVEEAFIATATKAYEAHLVKPSTPSTRIRRR-LGRKKHRRTASQGSDRDRPPRSDAS 269          
BLAST of mRNA_H-paniculata_contig20194.5207.1 vs. uniprot
Match: A0A6H5KJK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJK4_9PHAE)

HSP 1 Score: 309 bits (791), Expect = 3.940e-93
Identity = 156/248 (62.90%), Postives = 195/248 (78.63%), Query Frame = 0
Query:    1 SSVQGFLSVGGGGNHRHGLRRGHQPPPRVHKIKLLMLGDSGVGKSSLMERFTEDNFNTSTVGTFGVDYKLKEVTINDELVMVQVWDTAGQQRFHKITQAYYRGSNAIVLVYDVANPETLGNIAYWMQSIRDNADSNRVQICLVGNKVDLRQEAGEAGENGASARMAQTRKGKEIADKFGADFFECSAKTGCRVEDAFVTVTTKAFEVYMLKPPTPSGRSKRHSIRRRKHQRQTSQGSDKDRPPRSEAS 248
            SSVQGFLSVGGG +  +G  RGH   P   KIKLLMLGDSGVGKSSLM+RF ED F+ + V T GVD+KLK + +NDE V +QVWDTAGQQ+FHKITQAYYRGS+ IVLVYD+++P+TL N AYWM+SIRD A SNRVQICL+GNKVDLR+E G   +    + M +T  G+++A++FGA++FECSAKTGC VE+AF+   TKA+E +++KP TPS R +R   R+ KH+R  SQGSD+DRPPR +AS
Sbjct:  914 SSVQGFLSVGGG-SQPYGAWRGHGGAPPARKIKLLMLGDSGVGKSSLMDRFMEDYFSITKVQTLGVDFKLKTIFLNDEEVDLQVWDTAGQQKFHKITQAYYRGSHGIVLVYDISDPKTLDNTAYWMRSIRDTAGSNRVQICLIGNKVDLREEVGREEQQQDLSGMVETSTGRKVAEEFGAEYFECSAKTGCMVEEAFIATATKAYEAHLVKPSTPSTRIRRRPGRK-KHRRTASQGSDRDRPPRGDAS 1159          
BLAST of mRNA_H-paniculata_contig20194.5207.1 vs. uniprot
Match: A0A835YLY5_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLY5_9STRA)

HSP 1 Score: 184 bits (466), Expect = 9.100e-54
Identity = 101/200 (50.50%), Postives = 125/200 (62.50%), Query Frame = 0
Query:   31 KIKLLMLGDSGVGKSSLMERFTEDNFNTSTVGTFGVDYKLKEVTINDELVMVQVWDTAGQQRFHKITQAYYRGSNAIVLVYDVANPETLGNIAYWMQSIRDNADSNRVQICLVGNKVDLRQEAGEAGEN----------------------GASARMAQ--TRKGKEIADKFGADFFECSAKTGCRVEDAFVTVTTKAFE 206
            K+K+LMLGD+GVGKSSLM RFTED F    VGT GVD+K++ + +  E V+VQVWDTAGQ+RFHKIT+AYYRGS+ I+L YDV  P TL NI+YW+ +I+DNA S  V  CLVGNK+DLR E                              AS + A   T  G+ IA ++G  FFE SAKTG  V  AFV++   A E
Sbjct:    2 KVKILMLGDTGVGKSSLMNRFTEDEFFPGLVGTVGVDFKMRTLDLRGERVLVQVWDTAGQERFHKITRAYYRGSHGILLAYDVGEPATLENISYWINNIQDNASSG-VCTCLVGNKMDLRGETAAXXXXXXXXXXXXXXXXXXANPLSCCVSASPKAAPVGTDSGRAIAQQYGVAFFETSAKTGHNVHAAFVSLVESALE 200          
BLAST of mRNA_H-paniculata_contig20194.5207.1 vs. uniprot
Match: H6WB87_VAULI (Rab8 family GTPase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB87_VAULI)

HSP 1 Score: 186 bits (471), Expect = 2.480e-52
Identity = 96/203 (47.29%), Postives = 133/203 (65.52%), Query Frame = 0
Query:   15 HRHGLRRGHQPPPRVHKIKLLMLGDSGVGKSSLMERFTEDNFNTSTVGTFGVDYKLKEVTINDELVMVQVWDTAGQQRFHKITQAYYRGSNAIVLVYDVANPETLGNIAYWMQSIRDNADSNRVQICLVGNKVDLRQEA---------GEAGENGASARMA--------QTRKGKEIADKFGADFFECSAKTGCRVEDAFVTV 200
            HR+  R        + KIK+LMLGD+GVGKSSL++RFT+D F+   VGT GVD+K++ + +  E + VQVWDTAGQ+RFHKIT+AYY G   I+L YDV  P TL NI+YW+++IRDNA S  V+ CLVGNK DL+  A           A   G+  + +        +T  G++IA+++G +FFE SAKTG  V +AF+++
Sbjct:  239 HRNYNRHRPHRSENLRKIKILMLGDTGVGKSSLIQRFTDDTFHAGMVGTVGVDFKIRTMEVLGEKITVQVWDTAGQERFHKITRAYYHGCQGILLAYDVGEPGTLENISYWIKNIRDNA-SKDVRTCLVGNKADLKVRAISPYQLNWCVSASPQGSGRKRSWECPPVQVETESGQQIAEEYGVNFFEASAKTGYNVNEAFLSL 440          
BLAST of mRNA_H-paniculata_contig20194.5207.1 vs. uniprot
Match: A0A7S1XMQ1_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XMQ1_9STRA)

HSP 1 Score: 171 bits (432), Expect = 2.190e-48
Identity = 86/183 (46.99%), Postives = 125/183 (68.31%), Query Frame = 0
Query:   26 PPRVHKIKLLMLGDSGVGKSSLMERFTEDNFNTSTVGTFGVDYKLKEVTIND--ELVMVQVWDTAGQQRFHKITQAYYRGSNAIVLVYDVANPETLGNIAYWMQSIRDNADSNRVQICLVGNKVDLRQEAGEAGENGASARMAQTRKGKEIADKFGADFFECSAKTGCRVEDAFVTVTTKAFE 206
            P  + K K+LMLGDS VGK+SL+ RF ED F  + VGT GVD+K+K + +    E+  VQ+WDTAGQ+RFH+IT+ YYRG+NAI L +D ++ ++L N+ YW+Q+I+DNA S+ V + L  NK+DLR+       + A+      R+G++IA ++G ++FE SAKTG  VE +F  +   AFE
Sbjct:   94 PRHLKKFKILMLGDSAVGKTSLINRFVEDKFAHNLVGTVGVDFKMKRMWLGPTKEMCTVQIWDTAGQERFHRITKTYYRGANAIYLTFDCSSQDSLDNLEYWVQNIKDNA-SDDVLVLLAANKIDLRETESP---DKATEISGIVRRGQDIASQYGIEYFETSAKTGDGVEASFTRLADIAFE 272          
BLAST of mRNA_H-paniculata_contig20194.5207.1 vs. uniprot
Match: A0A482RSH1_9ARCH (GTP-binding protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RSH1_9ARCH)

HSP 1 Score: 169 bits (429), Expect = 4.590e-48
Identity = 86/188 (45.74%), Postives = 122/188 (64.89%), Query Frame = 0
Query:   29 VHKIKLLMLGDSGVGKSSLMERFTEDNFNTSTVGTFGVDYKLKEVTINDELVMVQVWDTAGQQRFHKITQAYYRGSNAIVLVYDVANPETLGNIAYWMQSIRDNADSNRVQICLVGNKVDLRQEAGEAGENGASARMAQTRKGKEIADKFGADFFECSAKTGCRVEDAFVTVTTKAFEVYMLKPPTPS 216
            V ++K+L+LGDSGVGKSSL+ R+T D F+ S   T GV++K K++    E + VQVWDTAGQ++FHKIT +YY+G+  I+LVYDVA+  +L N+ YW+++I+ +A S+ V + LVGNK+DLR    +        +     +GKEI+ KFG  FFE SAK    VE AF+T+     +       TPS
Sbjct:   50 VRRVKILLLGDSGVGKSSLIVRWTHDTFSPSLASTVGVNFKNKKIAYKGECLQVQVWDTAGQEQFHKITTSYYKGAQGIMLVYDVADANSLANVEYWIKNIKTHA-SDSVHVVLVGNKIDLRHADPDK-------KYIDMNRGKEISHKFGVPFFETSAKDSSNVEHAFMTLVGDIADATSPTKITPS 229          
BLAST of mRNA_H-paniculata_contig20194.5207.1 vs. uniprot
Match: A0A836BQA0_9CHLO (Uncharacterized protein n=2 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BQA0_9CHLO)

HSP 1 Score: 165 bits (418), Expect = 2.260e-47
Identity = 81/171 (47.37%), Postives = 115/171 (67.25%), Query Frame = 0
Query:   32 IKLLMLGDSGVGKSSLMERFTEDNFNTSTVGTFGVDYKLKEVTINDELVMVQVWDTAGQQRFHKITQAYYRGSNAIVLVYDVANPETLGNIAYWMQSIRDNADSNRVQIC--LVGNKVDLRQEAGEAGENGASARMAQTRKGKEIADKFGADFFECSAKTGCRVEDAFVTV 200
            IKLL++GDSGVGKS L+ RFT+D F +S + T G+D+K+K+V +  +LV +Q+WDTAGQ+RF  IT AYYRG+  I+LVYD+++  +  N+  WM++I  +A  N  ++C  LVGNK+DL          G   R+  T +G+ +AD+FG  FFE SAK    VE+AF  V
Sbjct:   11 IKLLLVGDSGVGKSCLLLRFTDDMFTSSFITTIGIDFKIKKVDVEGKLVKLQIWDTAGQERFRTITSAYYRGAQGIILVYDISDEASFNNVRNWMRNIEQHASDNVNKVCGILVGNKLDL----------GDDKRVVSTARGQALADEFGFRFFETSAKDNVNVEEAFHAV 171          
BLAST of mRNA_H-paniculata_contig20194.5207.1 vs. uniprot
Match: A0A5B8MUA6_9CHLO (Small rab-related GTPase n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MUA6_9CHLO)

HSP 1 Score: 164 bits (416), Expect = 3.160e-47
Identity = 82/172 (47.67%), Postives = 116/172 (67.44%), Query Frame = 0
Query:   30 HKIKLLMLGDSGVGKSSLMERFTEDNFNTSTVGTFGVDYKLKEVTINDELVMVQVWDTAGQQRFHKITQAYYRGSNAIVLVYDVANPETLGNIAYWMQSIRDNADSNRVQICLVGNKVDLRQEAGEAGENGASARMAQTRKGKEIADKFGADFFECSAKTGCRVEDAFVTVT 201
            H IKLL++GDSGVGK+SL+ RF+ED+F TS + T G+D+K+K+V I+++   +Q+WDTAGQ+RF  IT+AYYRG+  I+LVYD  + ++  N+  WM++I  NA  N V   L+GNK D            ++ R   T  G+ +A +FG  FFE SAKTG  VEDAFV ++
Sbjct:   10 HVIKLLVIGDSGVGKTSLLLRFSEDSFTTSFISTIGIDFKIKKVMIDEKCCKLQIWDTAGQERFRTITKAYYRGAMGIMLVYDTTDEKSFENVRNWMKNIEQNAAPN-VNKILIGNKSD------------SAKRAISTSMGEALAQEFGIQFFETSAKTGSYVEDAFVHIS 168          
BLAST of mRNA_H-paniculata_contig20194.5207.1 vs. uniprot
Match: UPI00193A3852 (ras-related protein Rab-10-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193A3852)

HSP 1 Score: 163 bits (412), Expect = 1.020e-46
Identity = 75/171 (43.86%), Postives = 118/171 (69.01%), Query Frame = 0
Query:   32 IKLLMLGDSGVGKSSLMERFTEDNFNTSTVGTFGVDYKLKEVTINDELVMVQVWDTAGQQRFHKITQAYYRGSNAIVLVYDVANPETLGNIAYWMQSIRDNADSNRVQICLVGNKVDLRQEAGEAGENGASARMAQTRKGKEIADKFGADFFECSAKTGCRVEDAFVTVTT 202
             KLL++GDSGVGK+ ++ RF++D FNT+ + T G+D+K+K V +N + + +Q+WDTAGQ+RFH IT +YYRG+N I+LVYD+ NP++  NI+ W+++I ++A S  V+  L+GNK D+ ++           RM    +G++IA + G  F+E SAK    +E AF+T+ T
Sbjct:   10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELNGKKIKLQIWDTAGQERFHTITTSYYRGANGIMLVYDITNPKSFDNISKWLRNIEEHA-SEDVERMLLGNKCDMEEK-----------RMISKERGEQIAREHGIKFYETSAKNNINIEKAFMTLAT 168          
BLAST of mRNA_H-paniculata_contig20194.5207.1 vs. uniprot
Match: Q2HU64_MEDTR (Putative small GTPase superfamily, P-loop containing nucleoside triphosphate hydrolase n=2 Tax=Medicago truncatula TaxID=3880 RepID=Q2HU64_MEDTR)

HSP 1 Score: 163 bits (413), Expect = 1.100e-46
Identity = 87/204 (42.65%), Postives = 122/204 (59.80%), Query Frame = 0
Query:   30 HKIKLLMLGDSGVGKSSLMERFTEDNFNTSTVGTFGVDYKLKEVTINDELVMVQVWDTAGQQRFHKITQAYYRGSNAIVLVYDVANPETLGNIAYWMQSIRDNADSNRVQICLVGNKVDLRQEAGEAGENGASARMAQTRKGKEIADKFGADFFECSAKTGCRVEDAFVTVTTKAFEVYMLKPPTPSGRSKRHSIRRRKHQRQT 233
            H IKLL++GDSGVGKSSL+ RF++  F TS + T G+DYK + + ++ + +M+QVWDTAGQ+RF  IT AYYRG+  I+LVYDV +  +  NI  W++SI  ++  N V   LVGNKVD+ +          S R     KG+ +A+K+G  FFE SAKT   V++AF ++         +K   P  +     IR  KH   T
Sbjct:   14 HLIKLLLIGDSGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILVGNKVDMDE----------SKRAVPFSKGQALANKYGIKFFETSAKTNLNVDEAFFSIARD------IKQRLPDSKKTPSRIRINKHNNAT 201          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20194.5207.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMQ2_ECTSI4.440e-9964.34Rab8E, RAB family GTPase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KJK4_9PHAE3.940e-9362.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YLY5_9STRA9.100e-5450.50P-loop containing nucleoside triphosphate hydrolas... [more]
H6WB87_VAULI2.480e-5247.29Rab8 family GTPase n=1 Tax=Vaucheria litorea TaxID... [more]
A0A7S1XMQ1_9STRA2.190e-4846.99Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A482RSH1_9ARCH4.590e-4845.74GTP-binding protein n=1 Tax=archaeon TaxID=1906665... [more]
A0A836BQA0_9CHLO2.260e-4747.37Uncharacterized protein n=2 Tax=Edaphochlamys deba... [more]
A0A5B8MUA6_9CHLO3.160e-4747.67Small rab-related GTPase n=1 Tax=Chloropicon primu... [more]
UPI00193A38521.020e-4643.86ras-related protein Rab-10-like n=1 Tax=Styela cla... [more]
Q2HU64_MEDTR1.100e-4642.65Putative small GTPase superfamily, P-loop containi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 136..149
score: 50.38
coord: 32..53
score: 49.14
coord: 55..71
score: 26.43
coord: 73..95
score: 39.25
coord: 182..204
score: 37.55
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 37..248
e-value: 0.0022
score: 0.0
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 34..207
e-value: 3.0E-11
score: 24.5
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 29..207
e-value: 1.9E-16
score: 70.7
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 32..207
e-value: 1.6E-57
score: 207.1
NoneNo IPR availableGENE3D3.40.50.300coord: 24..209
e-value: 2.4E-57
score: 195.2
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 24..221
NoneNo IPR availablePANTHERPTHR24073:SF519RAS-RELATED PROTEIN RAB-44coord: 24..221
NoneNo IPR availablePROSITEPS51419RABcoord: 26..248
score: 27.55
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 31..200
e-value: 1.1E-27
score: 94.8
IPR001806Small GTPasePFAMPF00071Rascoord: 33..204
e-value: 1.1E-50
score: 171.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 29..218

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20194contigH-paniculata_contig20194:925..4118 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20194.5207.1mRNA_H-paniculata_contig20194.5207.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig20194 925..4118 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig20194.5207.1 ID=prot_H-paniculata_contig20194.5207.1|Name=mRNA_H-paniculata_contig20194.5207.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=248bp
SSVQGFLSVGGGGNHRHGLRRGHQPPPRVHKIKLLMLGDSGVGKSSLMER
FTEDNFNTSTVGTFGVDYKLKEVTINDELVMVQVWDTAGQQRFHKITQAY
YRGSNAIVLVYDVANPETLGNIAYWMQSIRDNADSNRVQICLVGNKVDLR
QEAGEAGENGASARMAQTRKGKEIADKFGADFFECSAKTGCRVEDAFVTV
TTKAFEVYMLKPPTPSGRSKRHSIRRRKHQRQTSQGSDKDRPPRSEAS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005225Small_GTP-bd_dom
IPR001806Small_GTPase
IPR027417P-loop_NTPase