prot_H-paniculata_contig20183.5200.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig20183.5200.1
Unique Nameprot_H-paniculata_contig20183.5200.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length129
Homology
BLAST of mRNA_H-paniculata_contig20183.5200.1 vs. uniprot
Match: D7FZQ1_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZQ1_ECTSI)

HSP 1 Score: 199 bits (507), Expect = 1.390e-59
Identity = 97/131 (74.05%), Postives = 117/131 (89.31%), Query Frame = 0
Query:    1 GGNIVLAAETGSGKTLAYLLPVIQQLKAQEKF--DGADPVRKTQRPRAVVLVPTRELAVQVLEVAKRLSRSCKFSSCGVIGGEEYGKQKRQLAGTVDLVVASPGRLLKHKEQGNFFMSQVTHVIVDEVDTM 129
            GGNIV AA TGSGKTLAYL+P+IQQLK +E    +G + +R+T+RPRA+VLVPTRELA+QVLEVAKRLSRSCKFSSCGV+GGE+YGKQ+++LAGTVD+VV +PGRLLKH E GNFFMS+  +V+VDEVDTM
Sbjct:   55 GGNIVFAASTGSGKTLAYLMPLIQQLKVEEAQAEEGGESIRQTKRPRAIVLVPTRELAMQVLEVAKRLSRSCKFSSCGVVGGEDYGKQRQRLAGTVDIVVGTPGRLLKHHEAGNFFMSKANYVVVDEVDTM 185          
BLAST of mRNA_H-paniculata_contig20183.5200.1 vs. uniprot
Match: A0A6H5KY63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY63_9PHAE)

HSP 1 Score: 201 bits (510), Expect = 6.780e-59
Identity = 98/131 (74.81%), Postives = 117/131 (89.31%), Query Frame = 0
Query:    1 GGNIVLAAETGSGKTLAYLLPVIQQLKAQEKF--DGADPVRKTQRPRAVVLVPTRELAVQVLEVAKRLSRSCKFSSCGVIGGEEYGKQKRQLAGTVDLVVASPGRLLKHKEQGNFFMSQVTHVIVDEVDTM 129
            GGN+V AA TGSGKTLAYL+P+IQQLK +E    +G + +R+T+RPRA+VLVPTRELAVQVLEVAKRLSRSCKFSSCGV+GGE+YGKQ+++LAGTVD+VV +PGRLLKH E GNFFMS+  +VIVDEVDTM
Sbjct:  172 GGNVVFAASTGSGKTLAYLMPLIQQLKVEEAQAEEGGESIRQTKRPRAIVLVPTRELAVQVLEVAKRLSRSCKFSSCGVVGGEDYGKQRQRLAGTVDIVVGTPGRLLKHHEAGNFFMSKANYVIVDEVDTM 302          
BLAST of mRNA_H-paniculata_contig20183.5200.1 vs. uniprot
Match: A0A836CEI1_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEI1_9STRA)

HSP 1 Score: 176 bits (447), Expect = 1.460e-50
Identity = 88/129 (68.22%), Postives = 106/129 (82.17%), Query Frame = 0
Query:    1 GGNIVLAAETGSGKTLAYLLPVIQQLKAQEKFDGADPVRKTQRPRAVVLVPTRELAVQVLEVAKRLSRSCKFSSCGVIGGEEYGKQKRQLAGTVDLVVASPGRLLKHKEQGNFFMSQVTHVIVDEVDTM 129
            GGN+V+AA TGSGKTLAYLLPVI  LK+QE+   A  VRK  RPRA+VLVPTRELA QVL V K+++ + K SSCG+ GGE+YGKQKR+LA   D+VV SPGRLLKH++QG  F+SQVTHV++DEVDTM
Sbjct:   56 GGNMVVAAATGSGKTLAYLLPVINALKSQEQLSDAT-VRKPGRPRALVLVPTRELAAQVLGVTKQVAHTAKVSSCGIFGGEDYGKQKRELAACQDVVVGSPGRLLKHRDQGTLFLSQVTHVVIDEVDTM 183          
BLAST of mRNA_H-paniculata_contig20183.5200.1 vs. uniprot
Match: A0A7S2V6I9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6I9_9STRA)

HSP 1 Score: 168 bits (426), Expect = 7.910e-49
Identity = 90/141 (63.83%), Postives = 104/141 (73.76%), Query Frame = 0
Query:    1 GGNIVLAAETGSGKTLAYLLPVIQQLKAQEKFDGADP------------VRKTQRPRAVVLVPTRELAVQVLEVAKRLSRSCKFSSCGVIGGEEYGKQKRQLAGTVDLVVASPGRLLKHKEQGNFFMSQVTHVIVDEVDTM 129
            GGN+V AA TGSGKTLAYLLPVIQQL+AQE    A              VR  +RPRAVVLVPTRELA QVL V K++ R  K S C V+GGE+YGKQ R LAGTVDLVVA+PGRLL H+ +G  ++S+VTHV+VDEVDTM
Sbjct:  144 GGNMVFAAATGSGKTLAYLLPVIQQLRAQEAVAEACAEAAMQRGEVGLSVRAPKRPRAVVLVPTRELAAQVLAVTKQIGRYAKVSCCSVVGGEDYGKQARALAGTVDLVVATPGRLLMHRNKGGVYLSKVTHVVVDEVDTM 284          
BLAST of mRNA_H-paniculata_contig20183.5200.1 vs. uniprot
Match: A0A7S2WDP9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WDP9_9STRA)

HSP 1 Score: 172 bits (435), Expect = 1.590e-48
Identity = 86/127 (67.72%), Postives = 104/127 (81.89%), Query Frame = 0
Query:    3 NIVLAAETGSGKTLAYLLPVIQQLKAQEKFDGADPVRKTQRPRAVVLVPTRELAVQVLEVAKRLSRSCKFSSCGVIGGEEYGKQKRQLAGTVDLVVASPGRLLKHKEQGNFFMSQVTHVIVDEVDTM 129
            N+  AA TGSGKTLAYLLP +Q LK QE+ +G +  R  +RPRA+VLVPTRELAVQVL VAKRLS + KFSSC V+GG ++G+Q+R LAG VD+VVASPGRLLKH+   + F+SQVTHVI+DEVDTM
Sbjct:  118 NLAFAASTGSGKTLAYLLPTVQALKVQEELEGFE--RAPKRPRALVLVPTRELAVQVLSVAKRLSHNAKFSSCAVVGGGDHGQQRRALAGVVDVVVASPGRLLKHRLNDHVFLSQVTHVIIDEVDTM 242          
BLAST of mRNA_H-paniculata_contig20183.5200.1 vs. uniprot
Match: A0A4D9D2M2_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2M2_9STRA)

HSP 1 Score: 164 bits (414), Expect = 4.800e-45
Identity = 82/129 (63.57%), Postives = 103/129 (79.84%), Query Frame = 0
Query:    1 GGNIVLAAETGSGKTLAYLLPVIQQLKAQEKFDGADPVRKTQRPRAVVLVPTRELAVQVLEVAKRLSRSCKFSSCGVIGGEEYGKQKRQLAGTVDLVVASPGRLLKHKEQGNFFMSQVTHVIVDEVDTM 129
            G ++  +A TGSGKTLAYLLP++Q+LK QE  +G +  R+T RPRA++LVPTREL  QVLEV K LS   K SSCG+ GGE++G Q+R+L G VDLVVASPGRLL+H E+G+ F SQVTHV+VDE+DTM
Sbjct:  166 GDDVAFSASTGSGKTLAYLLPIMQELKWQEAVEGKE--RQTCRPRALILVPTRELVTQVLEVIKSLSHVIKLSSCGLHGGEDFGVQRRRLGGMVDLVVASPGRLLQHYEKGHVFFSQVTHVVVDEMDTM 292          
BLAST of mRNA_H-paniculata_contig20183.5200.1 vs. uniprot
Match: A0A7S2FKV5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FKV5_9STRA)

HSP 1 Score: 153 bits (386), Expect = 1.760e-41
Identity = 81/129 (62.79%), Postives = 96/129 (74.42%), Query Frame = 0
Query:    1 GGNIVLAAETGSGKTLAYLLPVIQQLKAQEKFDGADPVRKTQRPRAVVLVPTRELAVQVLEVAKRLSRSCKFSSCGVIGGEEYGKQKRQLAGTVDLVVASPGRLLKHKEQGNFFMSQVTHVIVDEVDTM 129
            G NI LAA TGSGKTLAYLLP++Q LK QE   G D  R  +RPR +VLVPTRELA QVL VAK L    KFSSC ++GG + G+Q+R L G  D+ VAS GRLLKH+E G+  +SQVTHV++DEVDTM
Sbjct:   76 GQNIALAASTGSGKTLAYLLPIVQALKIQEDM-GYD--RLAKRPRVLVLVPTRELATQVLSVAKHLGHYSKFSSCCIVGGGDNGQQRRALTGVQDVCVASAGRLLKHQELGHMHLSQVTHVVIDEVDTM 201          
BLAST of mRNA_H-paniculata_contig20183.5200.1 vs. uniprot
Match: A0A7S4LLS1_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LLS1_9EUGL)

HSP 1 Score: 145 bits (365), Expect = 1.700e-38
Identity = 78/129 (60.47%), Postives = 97/129 (75.19%), Query Frame = 0
Query:    1 GGNIVLAAETGSGKTLAYLLPVIQQLKAQEKFDGADPVRKTQRPRAVVLVPTRELAVQVLEVAKRLSRSCKFSSCGVIGGEEYGKQKRQLAGTVDLVVASPGRLLKHKEQGNFFMSQVTHVIVDEVDTM 129
            G ++  AA TGSGKTLAYLLPVIQ+LKAQE   G +  R  +RPRA+V VPTREL  QVL V K LS   K SS  V+GGE+YGKQ+R L   VD+VVA+PGRL +H ++G+F+MS+V  V++DEVDTM
Sbjct:  100 GESLAYAATTGSGKTLAYLLPVIQELKAQE-LAGVE--RLPKRPRAIVFVPTRELGQQVLSVLKALSHHAKISSTLVVGGEDYGKQRRALDRPVDVVVATPGRLREHWKKGHFYMSEVKEVVIDEVDTM 225          
BLAST of mRNA_H-paniculata_contig20183.5200.1 vs. uniprot
Match: A0A7R9YDC6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDC6_9STRA)

HSP 1 Score: 142 bits (357), Expect = 3.320e-38
Identity = 75/132 (56.82%), Postives = 95/132 (71.97%), Query Frame = 0
Query:    1 GGNIVLAAETGSGKTLAYLLPVIQQLKAQE---KFDGADPVRKTQRPRAVVLVPTRELAVQVLEVAKRLSRSCKFSSCGVIGGEEYGKQKRQLAGTVDLVVASPGRLLKHKEQGNFFMSQVTHVIVDEVDTM 129
            G N VLAA TGSGKTLAYLLPV++ LK +E     +G   +R+ +RPRA+VLVPTRELA+QV    K L    K SS  VIGG++ GKQK+ L   +D++VASPGRL+K ++ GN F+  V HV+VDEVDTM
Sbjct:   80 GENAVLAAGTGSGKTLAYLLPVVEHLKTEEFSRDAEGMATLRRPKRPRALVLVPTRELAMQVAGTMKELGHYVKLSSTMVIGGDQLGKQKKLLDRPIDVLVASPGRLIKMRDAGNVFLGSVKHVVVDEVDTM 211          
BLAST of mRNA_H-paniculata_contig20183.5200.1 vs. uniprot
Match: A0A0G4F3L1_VITBC (Uncharacterized protein n=4 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F3L1_VITBC)

HSP 1 Score: 146 bits (368), Expect = 4.110e-38
Identity = 74/129 (57.36%), Postives = 101/129 (78.29%), Query Frame = 0
Query:    1 GGNIVLAAETGSGKTLAYLLPVIQQLKAQEKFDGADPVRKTQRPRAVVLVPTRELAVQVLEVAKRLSRSCKFSSCGVIGGEEYGKQKRQLAGTVDLVVASPGRLLKHKEQGNFFMSQVTHVIVDEVDTM 129
            GGNIV AAETGSGKTLAYLLP++Q LK++E  DG   +R+ +RPRA++L PTREL+ QVLEV +  S+  K SSC VIGG+ + KQKR L+  +D+VV +PGR+L H ++ N  +S+V++V++DEVDTM
Sbjct:  882 GGNIVFAAETGSGKTLAYLLPMMQHLKSEE-LDGRS-LRRPKRPRALILSPTRELSQQVLEVLRGSSQLAKLSSCSVIGGDSFAKQKRDLSKILDVVVGTPGRVLFHWDKSNLALSEVSYVVIDEVDTM 1008          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20183.5200.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZQ1_ECTSI1.390e-5974.05DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5KY63_9PHAE6.780e-5974.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CEI1_9STRA1.460e-5068.22DEAD box helicase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A7S2V6I9_9STRA7.910e-4963.83Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S2WDP9_9STRA1.590e-4867.72Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A4D9D2M2_9STRA4.800e-4563.57Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S2FKV5_9STRA1.760e-4162.79Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S4LLS1_9EUGL1.700e-3860.47Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7R9YDC6_9STRA3.320e-3856.82Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A0G4F3L1_VITBC4.110e-3857.36Uncharacterized protein n=4 Tax=Vitrella brassicaf... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 2..128
e-value: 1.6E-4
score: 31.0
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..129
score: 22.763
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 1..129
e-value: 7.9E-33
score: 113.7
NoneNo IPR availableGENE3D3.40.50.300coord: 1..129
e-value: 6.1E-43
score: 148.7
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 3..129
NoneNo IPR availablePANTHERPTHR24031:SF572DEAD-BOX ATP-DEPENDENT RNA HELICASE 40coord: 3..129
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20183contigH-paniculata_contig20183:1146..3121 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20183.5200.1mRNA_H-paniculata_contig20183.5200.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig20183 1146..3121 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig20183.5200.1 ID=prot_H-paniculata_contig20183.5200.1|Name=mRNA_H-paniculata_contig20183.5200.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=129bp
GGNIVLAAETGSGKTLAYLLPVIQQLKAQEKFDGADPVRKTQRPRAVVLV
PTRELAVQVLEVAKRLSRSCKFSSCGVIGGEEYGKQKRQLAGTVDLVVAS
PGRLLKHKEQGNFFMSQVTHVIVDEVDTM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase