mRNA_H-paniculata_contig2017.5194.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2017.5194.1 vs. uniprot
Match: A0A6H5JGV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGV1_9PHAE) HSP 1 Score: 247 bits (631), Expect = 4.950e-79 Identity = 132/201 (65.67%), Postives = 157/201 (78.11%), Query Frame = 1
Query: 1 IMARRTNAYQSKGGDDSMDALSAKLSADLRTSIRALGTFPMLSESWCKMATTLGRIAEISEAEAKLAREYPGGEQEEDG-----KTLWEGEELALRYVLEDGKLNVCLRNLVEWREFDQMRRT---LASVDENRSRESLDAFEKGMGTVLRNAWSHIEALQTTDIPLLVQYITGVINEATQDPRRIQDMSRRGELEDRQEV 579
+MARR AYQS G+DSM+ALS KLSADLR +IRALG FP+LS+ WCKMAT LGRIAEISEAEA+L ++ GE++E KTLWEGEE+ALRYVLEDGKLNVCLRNL EWR+F + RR A D ESLD+FEKGMGTVLRNAW+H+EALQTTDIPLLV+Y+TGV +A +P ++DMS RG+L RQE+
Sbjct: 2 MMARRPQAYQSNNGEDSMEALSTKLSADLRGNIRALGAFPLLSDEWCKMATALGRIAEISEAEARLTQDCIEGERKEGERKDCPKTLWEGEEMALRYVLEDGKLNVCLRNLSEWRKFHRNRRDGGGQAGEDGPLVLESLDSFEKGMGTVLRNAWTHVEALQTTDIPLLVEYVTGVYRDAADNPGAVEDMSLRGDLAGRQEI 202
BLAST of mRNA_H-paniculata_contig2017.5194.1 vs. uniprot
Match: D7G0I2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0I2_ECTSI) HSP 1 Score: 218 bits (555), Expect = 1.010e-67 Identity = 120/196 (61.22%), Postives = 142/196 (72.45%), Query Frame = 1
Query: 1 IMARRTNAYQSKGGDDSMDALSAKLSADLRTSIRALGTFPMLSESWCKMATTLGRIAEISEAEAKLAREYPGGEQEEDGKTLWEGEELALRYVLEDGKLNVCLRNLVEWREFDQMRRT---LASVDENRSRESLDAFEKGMGTVLRNAWSHIEALQTTDIPLLVQYITGVINEATQDPRRIQDMSRRGELEDRQEV 579
+MARR +AY SK G+DSM+ALSAKLSADLR +IRALG FP+LS+ WCKMAT LGRIAEISEAE E+ALRYVLEDGKLNVCLRNL EWR+F + RR A D ESL++FEKGMGTVLRNAW+H+EALQTTDIPLLV+Y+TGV +A +P ++DMS RG+L RQE+
Sbjct: 1 MMARRLHAYHSKNGEDSMEALSAKLSADLRGNIRALGAFPLLSDEWCKMATALGRIAEISEAE-----------------------EMALRYVLEDGKLNVCLRNLSEWRKFHRNRRDGGGQAGEDGPLVLESLNSFEKGMGTVLRNAWTHVEALQTTDIPLLVEYVTGVYRDAADNPDAVEDMSLRGDLAGRQEI 173
BLAST of mRNA_H-paniculata_contig2017.5194.1 vs. uniprot
Match: A0A7S2V4C5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4C5_9STRA) HSP 1 Score: 196 bits (498), Expect = 3.600e-59 Identity = 104/187 (55.61%), Postives = 134/187 (71.66%), Query Frame = 1
Query: 19 NAYQSKGGDDSMDALSAKLSADLRTSIRALGTFPMLSESWCKMATTLGRIAEISEAEAKLAREYPGGEQEEDGKTLWEGEELALRYVLEDGKLNVCLRNLVEWREFDQMRRTLASVDENRSRESLDAFEKGMGTVLRNAWSHIEALQTTDIPLLVQYITGVINEATQDPRRIQDMSRRGELEDRQEV 579
N Y SK DD + ALS LS DLRT+IRALG+FP+LS+SW MA T GRIA IS+ E+KL ++ + TLWE EELALRY+LEDGKLN+CLRNLVE++ F++ R + R+ LDAFEKG+G VLRNAW H+EA+QTTD+PLL+ YI V+ +A ++P R++ + GELE RQEV
Sbjct: 5 NRYMSKCDDDDIFALSKTLSNDLRTAIRALGSFPVLSDSWNGMADTFGRIANISDMESKLPKDS-------ENATLWECEELALRYLLEDGKLNLCLRNLVEFKNFERELRNAPATLPTDHRDKLDAFEKGLGCVLRNAWRHVEAIQTTDLPLLINYIGDVMEDAVRNPTRLESFQKAGELEKRQEV 184
BLAST of mRNA_H-paniculata_contig2017.5194.1 vs. uniprot
Match: A0A1V9ZS11_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZS11_9STRA) HSP 1 Score: 160 bits (404), Expect = 3.900e-45 Identity = 89/189 (47.09%), Postives = 125/189 (66.14%), Query Frame = 1
Query: 13 RTNAYQSKGGDDSMDALSAKLSADLRTSIRALGTFPMLSESWCKMATTLGRIAEISEAEAKLAREYPGGEQEEDGKTLWEGEELALRYVLEDGKLNVCLRNLVEWREFDQMRRTLASVDENRSRESLDAFEKGMGTVLRNAWSHIEALQTTDIPLLVQYITGVINEATQDPRRIQDMSRRGELEDRQEV 579
R Y+ D ++ LSAKL+ADLR+ IR LG +P+LSE W +MA + R EISE E KL ++ + TLWE EELALRY+LEDGKLN+CLR LV+++E++ R T+ + ++E L FE+G+G +L+NAW H+EALQTTD+PLLV+YI V+ ++P + + +LED QEV
Sbjct: 3 RLGRYEKSSDADGIEKLSAKLTADLRSHIRFLGDYPILSEEWKEMANNMTRFGEISEMERKLPKQ--------ENATLWECEELALRYILEDGKLNLCLRLLVDYKEYE--RNTIGRDFDAEAKELLLKFERGLGVMLKNAWLHVEALQTTDLPLLVEYIATVLTFCHEEP----EFFKSKDLEDSQEV 177
BLAST of mRNA_H-paniculata_contig2017.5194.1 vs. uniprot
Match: A0A067CKH1_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CKH1_SAPPC) HSP 1 Score: 155 bits (391), Expect = 3.440e-43 Identity = 87/189 (46.03%), Postives = 123/189 (65.08%), Query Frame = 1
Query: 13 RTNAYQSKGGDDSMDALSAKLSADLRTSIRALGTFPMLSESWCKMATTLGRIAEISEAEAKLAREYPGGEQEEDGKTLWEGEELALRYVLEDGKLNVCLRNLVEWREFDQMRRTLASVDENRSRESLDAFEKGMGTVLRNAWSHIEALQTTDIPLLVQYITGVINEATQDPRRIQDMSRRGELEDRQEV 579
R Y+ D ++ L+AKL+ADLR IR LG +P+LS W +MA + R EISE E +L ++ + TLWE EELALRY+LEDGKLN+CLR LVE++E++ R TL + +++ L FE+G+G +L+NAW H+EALQTTD+PLLV+YI V+ ++P + + +LED QEV
Sbjct: 3 RLGRYEKSSDADGIEKLTAKLTADLRNHIRFLGDYPILSTEWKEMARNMTRFGEISEMERQLPKQ--------ENATLWECEELALRYILEDGKLNLCLRLLVEYKEYE--RNTLGRDFDAEAKDLLLKFERGLGVMLKNAWLHVEALQTTDLPLLVEYIASVLTFCHEEP----EFYKTKDLEDCQEV 177
BLAST of mRNA_H-paniculata_contig2017.5194.1 vs. uniprot
Match: A0A6A5AL85_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AL85_9STRA) HSP 1 Score: 149 bits (375), Expect = 2.430e-42 Identity = 80/173 (46.24%), Postives = 113/173 (65.32%), Query Frame = 1
Query: 13 RTNAYQSKGGDDSMDALSAKLSADLRTSIRALGTFPMLSESWCKMATTLGRIAEISEAEAKLAREYPGGEQEEDGKTLWEGEELALRYVLEDGKLNVCLRNLVEWREFDQ--MRRTLASVDENRSRESLDAFEKGMGTVLRNAWSHIEALQTTDIPLLVQYITGVINEATQDP 525
R Y DS++ LS KL+ADLR IR LG +P+LS W +MA + R EISE E + ++ D TLWE EELALRY+LEDGKLN+CLR LVE+++++ +R L E ++E + FE+G+G +L+NAW H+EALQTTD+PLL++Y+ GV+ ++P
Sbjct: 3 RVTRYAKTADVDSLEKLSLKLTADLRNHIRFLGDYPVLSAEWREMARNMMRFGEISEMERHMPKQ--------DNATLWECEELALRYILEDGKLNLCLRLLVEYKDYEHGISQRDLDVQPE--AKELISQFERGLGVMLKNAWLHVEALQTTDLPLLLEYVAGVLTFCEEEP 165
BLAST of mRNA_H-paniculata_contig2017.5194.1 vs. uniprot
Match: W4FWN5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FWN5_9STRA) HSP 1 Score: 149 bits (377), Expect = 4.260e-41 Identity = 83/191 (43.46%), Postives = 122/191 (63.87%), Query Frame = 1
Query: 13 RTNAYQSKGGDDSMDALSAKLSADLRTSIRALGTFPMLSESWCKMATTLGRIAEISEAEAKLAREYPGGEQEEDGKTLWEGEELALRYVLEDGKLNVCLRNLVEWREFDQ--MRRTLASVDENRSRESLDAFEKGMGTVLRNAWSHIEALQTTDIPLLVQYITGVINEATQDPRRIQDMSRRGELEDRQEV 579
R Y DS++ LS KL+ADLR IR LG +P+LS W +MA + R EISE E + ++ D TLWE EELALRY+LEDGKLN+CLR LVE+++++ +R L + ++E + FE+G+G +L+NAW H+EALQTTD+PLL++Y+ GV+ ++P ++ + +L D QE+
Sbjct: 3 RVTRYAKTADVDSLEKLSLKLTADLRNHIRFLGDYPVLSAEWREMARNMMRFGEISEMERHMPKQ--------DNATLWECEELALRYILEDGKLNLCLRLLVEYKDYEHGISQRDL----DPEAKELISQFERGLGVMLKNAWLHVEALQTTDLPLLLEYVAGVLTFCEEEPAYVE----KKDLVDSQEI 177
BLAST of mRNA_H-paniculata_contig2017.5194.1 vs. uniprot
Match: A0A485L431_9STRA (Aste57867_15868 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L431_9STRA) HSP 1 Score: 149 bits (375), Expect = 8.700e-41 Identity = 83/189 (43.92%), Postives = 119/189 (62.96%), Query Frame = 1
Query: 13 RTNAYQSKGGDDSMDALSAKLSADLRTSIRALGTFPMLSESWCKMATTLGRIAEISEAEAKLAREYPGGEQEEDGKTLWEGEELALRYVLEDGKLNVCLRNLVEWREFDQMRRTLASVDENRSRESLDAFEKGMGTVLRNAWSHIEALQTTDIPLLVQYITGVINEATQDPRRIQDMSRRGELEDRQEV 579
R Y+ DS++ LS KL+ADLR IR LG +P+LS W +MA + R EISE E L ++ + TLWE EELALRY+LEDGKLN+CLR LVE++ ++ T + ++E + FE+G+G +L+NAW H+EALQTTD+PLL++Y+ V+ ++P ++ +LED QEV
Sbjct: 3 RVARYEKTCDVDSLEKLSQKLTADLRNHIRFLGDYPVLSNEWKEMAHNMRRFGEISEMERNLPKQ--------ENATLWECEELALRYILEDGKLNLCLRILVEYKSYEHG--TAHREMDAETKEIVAMFERGLGVMLKNAWLHVEALQTTDLPLLIEYVASVLTFCEEEPAYVETK----DLEDSQEV 177
BLAST of mRNA_H-paniculata_contig2017.5194.1 vs. uniprot
Match: A0A024TTX0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TTX0_9STRA) HSP 1 Score: 148 bits (374), Expect = 1.200e-40 Identity = 80/173 (46.24%), Postives = 115/173 (66.47%), Query Frame = 1
Query: 13 RTNAYQSKGGDDSMDALSAKLSADLRTSIRALGTFPMLSESWCKMATTLGRIAEISEAEAKLAREYPGGEQEEDGKTLWEGEELALRYVLEDGKLNVCLRNLVEWREFDQ--MRRTLASVDENRSRESLDAFEKGMGTVLRNAWSHIEALQTTDIPLLVQYITGVINEATQDP 525
R + Y+ G DS++ LS KL+ADLR IR LG +P+LS W +MA + R EISE E +L + + TLWE EELALRY+LEDGKLN+CLR LVE+++++ +R L + ++ + FE+G+G +L+NAW H+EALQTTD+PLL++YI GV+ ++P
Sbjct: 3 RVSRYERTAGVDSLEKLSQKLTADLRNHIRFLGDYPVLSTEWKEMAHNMKRFGEISEMERQLPKH--------ENATLWECEELALRYILEDGKLNLCLRLLVEYKDYEHGISQREL----DPDTKALVSQFERGLGVMLKNAWLHVEALQTTDLPLLLEYIAGVLTFCEEEP 163
BLAST of mRNA_H-paniculata_contig2017.5194.1 vs. uniprot
Match: A0A6G0WRD2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WRD2_9STRA) HSP 1 Score: 148 bits (374), Expect = 1.530e-40 Identity = 86/187 (45.99%), Postives = 121/187 (64.71%), Query Frame = 1
Query: 25 YQSKGGDDSMDALSAKLSADLRTSIRALGTFPMLSESWCKMATTLGRIAEISEAEAKLAREYPGGEQEEDGKTLWEGEELALRYVLEDGKLNVCLRNLVEWREFDQ--MRRTLASVDENRSRESLDAFEKGMGTVLRNAWSHIEALQTTDIPLLVQYITGVINEATQDPRRIQDMSRRGELEDRQEV 579
Y+ DS++ LS KL+ADLR IR +G +P+LS W +MA + R EISE E L ++ + TLWE EELALRY+LEDGKLN+CLR LVE+++F+Q + R L DE R + + FE+G+G +L+NAW H+EALQTTD+PLL+ YI V+ ++P+ ++ +L D QEV
Sbjct: 7 YEKPSDVDSLERLSQKLTADLRNHIRFMGDYPVLSTEWKEMANNMMRFGEISEMERNLPKQ--------ENATLWECEELALRYILEDGKLNLCLRLLVEYKDFEQGSIHRVL---DEETHRITAN-FERGLGVMLKNAWLHVEALQTTDLPLLLNYIASVLTFCEENPQYVESK----DLADSQEV 177 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2017.5194.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2017.5194.1 >prot_H-paniculata_contig2017.5194.1 ID=prot_H-paniculata_contig2017.5194.1|Name=mRNA_H-paniculata_contig2017.5194.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=192bp MARRTNAYQSKGGDDSMDALSAKLSADLRTSIRALGTFPMLSESWCKMATback to top mRNA from alignment at H-paniculata_contig2017:219..2768- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2017.5194.1 ID=mRNA_H-paniculata_contig2017.5194.1|Name=mRNA_H-paniculata_contig2017.5194.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2550bp|location=Sequence derived from alignment at H-paniculata_contig2017:219..2768- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2017:219..2768- >mRNA_H-paniculata_contig2017.5194.1 ID=mRNA_H-paniculata_contig2017.5194.1|Name=mRNA_H-paniculata_contig2017.5194.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1152bp|location=Sequence derived from alignment at H-paniculata_contig2017:219..2768- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |