prot_H-paniculata_contig2014.5188.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2014.5188.1
Unique Nameprot_H-paniculata_contig2014.5188.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length417
Homology
BLAST of mRNA_H-paniculata_contig2014.5188.1 vs. uniprot
Match: D8LM21_ECTSI (Stn1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM21_ECTSI)

HSP 1 Score: 439 bits (1130), Expect = 6.800e-150
Identity = 232/384 (60.42%), Postives = 275/384 (71.61%), Query Frame = 0
Query:   36 EKAPHSATTAGLRVHEWGLNPLFWSYLKLFSRDVHAMGTLEGIDDSHVLHGKAAL-RVEVSGIVVHIK-----ICRSCVKYLLDDGTGLVACTQYERDGRSGALHQTHAERHDLGEFLIVHGKLKRYRGTREVAITSVRKPNDPNEEVLQWLQCVELAKTVYKPPFLRHEYIDDEVILSSSQARAVRCECGASYSNTIGYCRCVAPPLACDASFEFRDALLADLAAKENSLPS-GEHLRFQFARDIRDNPSLRDAAARVVLAARSIAPGAQTRDSARADGGVDHGGERTLSEAVLKAKVMELLRAVVFSLHRDGALHFSDKAKDIYVLLSRGRVLEPHVKQACFKLELGLTQENEIIRALQSTALFHHVSGARIRACIQRIKSA 412
            E A   + T GLRVHEWGLNPLFWSY+KL  RDVH +GTL GIDDSHVLHG  A+ RVEVSG+VVH+K        S VKY+LDDGTGL+ CTQYER   +GA H+ H+ERH+LGE L+V GKLKRYRG REVAITS  KP DPN+E L WL+CVEL KTVY+PPF R +YID+E++  SSQAR  +C CGA+Y+  +GYCRCVA PLA D +FEFRDALLA LAAKE SL    EHLRFQFARD    P+  +A A    A R +                           + +AK +ELLRAV+ SLHRDGALHF D+A+D+YVL+SRGRVL P V++AC +  LGL+QENEIIRALQ +AL HHV GARIRAC+ R+K A
Sbjct:   32 EPALDGSNTPGLRVHEWGLNPLFWSYVKLLIRDVHGLGTLGGIDDSHVLHGNKAIHRVEVSGVVVHVKPGATKASGSYVKYILDDGTGLLPCTQYERHAGTGATHRGHSERHELGELLVVQGKLKRYRGAREVAITSASKPTDPNQEALHWLRCVELGKTVYRPPFQRDDYIDEELVAGSSQARPTQCGCGAAYAEAVGYCRCVAAPLALDPTFEFRDALLARLAAKEESLAGPDEHLRFQFARD---RPA--EAGAAAAAAPRGV---------------------------MQQAKALELLRAVMSSLHRDGALHFLDRARDVYVLVSRGRVLRPAVEEACRRRRLGLSQENEIIRALQGSALLHHVPGARIRACVYRMKKA 383          
BLAST of mRNA_H-paniculata_contig2014.5188.1 vs. uniprot
Match: A0A2B4SF39_STYPI (CST complex subunit STN1 n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4SF39_STYPI)

HSP 1 Score: 100 bits (248), Expect = 7.430e-20
Identity = 52/153 (33.99%), Postives = 83/153 (54.25%), Query Frame = 0
Query:   44 TAGLRVHEWGLNPLFWSYLKLFSRDVHAMGTLEGIDDSHVLHGK-AALRVEVSGIVVHIKICRSCVKYLLDDGTGLVACTQYERDGRSGALHQTHAERHDLGEFLIVHGKLKRYRGTREVAITSVRKPNDPNEEVLQWLQCVELAKTVYKPPF 195
            ++ L V  WGLNPLFW+++K+F  +V ++         +        +RVEV+G +V I +      Y +DDG+G ++C ++          Q   E +DLG+ + V GK+  +R  R++ +  +    DPN EVL WL+ V L+ TVYK PF
Sbjct:    9 SSSLPVRFWGLNPLFWTHIKMFVTEVQSLKDNSDYKGVYWYSNNFPVVRVEVTGYIVSIDVREKLTTYGVDDGSGTISCCKWHSLDLKAGRGQ---ESYDLGQLVTVQGKISVFREQRQLTVDLIYPETDPNAEVLFWLEAVNLSNTVYKEPF 158          
BLAST of mRNA_H-paniculata_contig2014.5188.1 vs. uniprot
Match: A0A1Y1I7J1_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I7J1_KLENI)

HSP 1 Score: 95.1 bits (235), Expect = 4.140e-19
Identity = 52/157 (33.12%), Postives = 79/157 (50.32%), Query Frame = 0
Query:   49 VHEWGLNPLFWSYLKLFSRDVHAMGTLEGIDDSHVLHGKAALRVEVSGIVVHIKICRSCVKYLLDDGTGLV----------ACTQYERDGRSG-------ALHQTHAERHDLGEFLIVHGKLKRYRGTREVAITSVRKPNDPNEEVLQWLQCVELAK 188
            V  WGL P FW+++ L + DV A+  + G+  S  L G+   RVEV G+ V ++      + ++DDGTGLV          A +    D R         A     A    LG  + V G++ +YRG R+V + +++  N+PN EVL WL C+ + K
Sbjct:   43 VSRWGLAPSFWAHIPLLAADVEALQEVPGVPGSFALRGQPVRRVEVLGVAVEVECRDKSARCIVDDGTGLVPAILWLQPNGASSDAPEDSRHAVAAGVETAFAIKAAHELQLGRLVRVQGRVTQYRGVRQVTVDALQVENNPNAEVLHWLDCIRMKK 199          
BLAST of mRNA_H-paniculata_contig2014.5188.1 vs. uniprot
Match: UPI001F0352F5 (CST complex subunit STN1-like isoform X1 n=3 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F0352F5)

HSP 1 Score: 88.2 bits (217), Expect = 2.370e-16
Identity = 47/150 (31.33%), Postives = 77/150 (51.33%), Query Frame = 0
Query:   52 WGLNPLFWSYLKLFSRDVHAMGTLEGIDDSHVLHGKAALRVEVSGIVVHIKICRSCVKYLLDDGTGLVACTQYERDGRSGALHQTHAERHD--LGEFLIVHGKLKRYRGTREVAITSVRKPNDPNEEVLQWLQCVELAKTVYKPPFLRHE 199
            WG +PL+WS++KLF RDV  +    G D  + +     ++V + G VV +      + + +DDGTGL++C  +         +  H +  D  LG+ + V GK+  Y   R++ I+S     D N EVL WL  + + + +Y  PF  H+
Sbjct:   10 WGSDPLYWSHVKLFVRDVLCLREYPGFDSVYAISNHPVVQVLIVGYVVKVHKKEKLITFEVDDGTGLISCCYW---------YNEHVDMVDANLGDLVTVMGKISNYHNARQIIISSFYIETDHNVEVLHWLDVMNIRE-IYLKPFQLHD 149          
BLAST of mRNA_H-paniculata_contig2014.5188.1 vs. uniprot
Match: UPI001068F5E4 (CST complex subunit STN1-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI001068F5E4)

HSP 1 Score: 84.7 bits (208), Expect = 1.830e-14
Identity = 45/149 (30.20%), Postives = 76/149 (51.01%), Query Frame = 0
Query:   47 LRVHEWGLNPLFWSYLKLFSRDVHAMGTLEGIDDSHVLHGKAALRVEVSGIVVHIKICRSCVKYLLDDGTGLVACTQYERDGRSGALHQTHAERHDLGEFLIVHGKLKRYRGTREVAITSVRKPNDPNEEVLQWLQCVELAKTVYKPPF 195
            L V  WGL+PL+W+++KLF+RDV  +    G    + +     +   V G +V +        Y +DDGTG + C  +          Q++    D G+ + V G++  +R  R++ ++ +    D N EVL WL+ ++L K VY+ PF
Sbjct:    5 LPVKFWGLDPLYWTHVKLFARDVLKLKEYPGFTGVYAISNHPIVHALVVGYIVKVDKREKLTNYGVDDGTGFLPCCMWH--------DQSNGIEADFGDLVTVMGRISTFREERQITLSKLNIETDSNVEVLHWLEVMKL-KEVYQKPF 144          
BLAST of mRNA_H-paniculata_contig2014.5188.1 vs. uniprot
Match: A0A6S7J3X3_PARCT (CST complex subunit STN1 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7J3X3_PARCT)

HSP 1 Score: 82.8 bits (203), Expect = 7.970e-14
Identity = 47/154 (30.52%), Postives = 77/154 (50.00%), Query Frame = 0
Query:   47 LRVHEWGLNPLFWSYLKLFSRDVHAMGTLEGIDDSHVLHGKAALRVEVSGIVVHIKICRSCVKYLLDDGTGLVACTQYERDGRSGALHQTHAERHDL-----GEFLIVHGKLKRYRGTREVAITSVRKPNDPNEEVLQWLQCVELAKTVYKPPF 195
            L V  WGL+PL+W+++KLF RDV  +    G    + +      +V V G +V +        Y +DDGTG ++C  +            H + +DL     G+ + V GK+  +R  R++  +S     DPN EV  WL+ ++L + +Y+ PF
Sbjct:    5 LPVKSWGLDPLYWTHVKLFVRDVLQLKNYSGFKGVYAISNHPIAQVLVVGYIVKVDKREKLTTYGVDDGTGCLSCCMW------------HNQNNDLVEATFGDLVTVMGKISVFREERQITASSFYIETDPNVEVFHWLEVMKLRE-IYEKPF 145          
BLAST of mRNA_H-paniculata_contig2014.5188.1 vs. uniprot
Match: A0A0H5R9L4_9EUKA (OB domain-containing protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R9L4_9EUKA)

HSP 1 Score: 81.6 bits (200), Expect = 1.740e-13
Identity = 48/144 (33.33%), Postives = 78/144 (54.17%), Query Frame = 0
Query:   52 WGLNPLFWSYLKLFSRDVHAMGTLEGID-DSHVLHGKAALRVEVSGIVVHIKICRSCVKYLLDDGTGLVACTQYERDGRSGALHQTHAERHDLGEFLIVHGKLKRYRGTREVAITSVRKPNDPNEEVLQWLQCVELAKTVYKPP 194
            WGL  L+WSY++LF  D+  +G        S+ L+     RV + G+VV +++  + V  ++DDGTG++  T++  D  S     T  E   LG+ + ++GKL  +R  R+V I S     DPN E+L   Q ++L   +Y+ P
Sbjct:   26 WGLESLYWSYIRLFIGDISRLGEFPAHPGQSYALYRHPIHRVCILGVVVDLRLHATNVNVMVDDGTGIILATRWFNDRPSS----TELE---LGKLVQIYGKLSTFREERQVQILSWSVVVDPNVELLHCAQVIDLHDNLYRLP 162          
BLAST of mRNA_H-paniculata_contig2014.5188.1 vs. uniprot
Match: L8GR52_ACACA (OBfold nucleic acid binding domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GR52_ACACA)

HSP 1 Score: 77.4 bits (189), Expect = 7.230e-13
Identity = 48/148 (32.43%), Postives = 69/148 (46.62%), Query Frame = 0
Query:   49 VHEWGLNPLFWSYLKLFSRDVHAMGTLEGIDDSHV--LHGKAALRVEVSGIVVHIKICRSCVKYLLDDGTGLVACTQYERDGRSGALHQTHAERHDLGEFLIVHGKLKRYRGTREVAITSVRKPNDPNEEVLQWLQCVELAKTVYKPP 194
            V  WGL+PLFW+++KLF  D      L   D +    L+G    RV V GI+V        +   +DDGTG + C  Y      G +  +  +   +G    + GKL  +R  R +AI  +    DPN E    L  V L +T+Y+ P
Sbjct:   47 VEHWGLDPLFWTHVKLFIGDALTNLPLSEPDATEPFNLNGHPVTRVAVMGIIVEALPRPRHLALSVDDGTGRIQCAYYANSVDEGGVPYSDLQ---VGCLASIQGKLHHFRQQRSIAIYRIGIEEDPNAETQHMLDVVRLGETIYQRP 191          
BLAST of mRNA_H-paniculata_contig2014.5188.1 vs. uniprot
Match: A0A077RRV7_WHEAT (OB domain-containing protein n=1 Tax=Triticum aestivum TaxID=4565 RepID=A0A077RRV7_WHEAT)

HSP 1 Score: 73.9 bits (180), Expect = 4.520e-12
Identity = 49/152 (32.24%), Postives = 71/152 (46.71%), Query Frame = 0
Query:   54 LNPLFWSYLKLFSRDVHAMGTLEGIDDSHVLHGKAALRVEVSGIVVHIKICRSCVKYLLDDGTGLVACT-----QYERDGRS------GALHQTHAERHDLGEFLIVHGKLKRYRGTREVAITSVRKPNDPNEEVLQWLQCVELAKTVYKPP 194
            ++ L   ++KL + D+  +        S V  G+  +R EV G+VV        +++L+DDGT  V C      QY     S      G +    +E   LG  L V G++  YRG  ++ +  V    DPN EVL WLQCV +AK  Y  P
Sbjct:    1 MDSLHLVHVKLLASDILTLTPQHTSPPSFVCCGRTVVRAEVVGVVVSRDRREKFLRFLVDDGTACVPCVLWLNHQYLNANSSSDSDPTGEMALKMSEVVCLGTLLRVRGRIVMYRGAIQIVVRDVVLEEDPNVEVLHWLQCVHMAKECYDLP 152          
BLAST of mRNA_H-paniculata_contig2014.5188.1 vs. uniprot
Match: A0A8H3LH81_9GLOM (CST complex subunit STN1-like n=1 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A8H3LH81_9GLOM)

HSP 1 Score: 77.4 bits (189), Expect = 6.640e-12
Identity = 48/170 (28.24%), Postives = 87/170 (51.18%), Query Frame = 0
Query:   52 WGLNPLFWSYLKLFSRDVHAMGTLEG--IDD--------SHVLHGKA---ALRVEVSGIVVHIKICRSCVKYLLDDGTGLVACTQY---------ERDGRSGALHQTHA----ERHDLGEFLIVHGKLKRYRGTREVAITSVRKPNDPNEEVLQWLQCVELAKTVYKPPF 195
            W   PL+ + +KLF +D+H +  ++   ID+        S   +G++      V++ GIV  I I +  +KY +DDG+  ++CT++         ++D  S  L ++       + ++ E + V G L  Y+  +E+ I  + K  DPNEE+L+W++ + L K VY   F
Sbjct:   40 WEYEPLYHTEVKLFIKDIHNLNFVQHKKIDNKSGAEKVVSVFYYGQSNRPVQCVDIIGIVRAIDIFKKAIKYYIDDGSSTISCTEFIPENNKPSWQQDDSSSELTRSQVPPVLNKFNISELVRVGGMLNEYKKRKEIIIRHMNKVEDPNEELLRWIEIISLKKDVYCKEF 209          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2014.5188.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM21_ECTSI6.800e-15060.42Stn1 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A2B4SF39_STYPI7.430e-2033.99CST complex subunit STN1 n=2 Tax=Stylophora pistil... [more]
A0A1Y1I7J1_KLENI4.140e-1933.12Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
UPI001F0352F52.370e-1631.33CST complex subunit STN1-like isoform X1 n=3 Tax=X... [more]
UPI001068F5E41.830e-1430.20CST complex subunit STN1-like n=1 Tax=Dendronephth... [more]
A0A6S7J3X3_PARCT7.970e-1430.52CST complex subunit STN1 n=1 Tax=Paramuricea clava... [more]
A0A0H5R9L4_9EUKA1.740e-1333.33OB domain-containing protein (Fragment) n=1 Tax=Sp... [more]
L8GR52_ACACA7.230e-1332.43OBfold nucleic acid binding domain containing prot... [more]
A0A077RRV7_WHEAT4.520e-1232.24OB domain-containing protein n=1 Tax=Triticum aest... [more]
A0A8H3LH81_9GLOM6.640e-1228.24CST complex subunit STN1-like n=1 Tax=Rhizophagus ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 54..196
e-value: 7.2E-24
score: 86.1
NoneNo IPR availablePANTHERPTHR13989:SF33CST COMPLEX SUBUNIT STN1coord: 82..196
IPR040260Replication factor A protein-likePANTHERPTHR13989REPLICATION PROTEIN A-RELATEDcoord: 82..196
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 77..184

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2014contigH-paniculata_contig2014:1367..15301 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2014.5188.1mRNA_H-paniculata_contig2014.5188.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2014 588..15360 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2014.5188.1 ID=prot_H-paniculata_contig2014.5188.1|Name=mRNA_H-paniculata_contig2014.5188.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=417bp
MKSPRSSYMEPSLLSKTTREDSTFAQAENVEKTCVEKAPHSATTAGLRVH
EWGLNPLFWSYLKLFSRDVHAMGTLEGIDDSHVLHGKAALRVEVSGIVVH
IKICRSCVKYLLDDGTGLVACTQYERDGRSGALHQTHAERHDLGEFLIVH
GKLKRYRGTREVAITSVRKPNDPNEEVLQWLQCVELAKTVYKPPFLRHEY
IDDEVILSSSQARAVRCECGASYSNTIGYCRCVAPPLACDASFEFRDALL
ADLAAKENSLPSGEHLRFQFARDIRDNPSLRDAAARVVLAARSIAPGAQT
RDSARADGGVDHGGERTLSEAVLKAKVMELLRAVVFSLHRDGALHFSDKA
KDIYVLLSRGRVLEPHVKQACFKLELGLTQENEIIRALQSTALFHHVSGA
RIRACIQRIKSAEAEN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040260RFA2-like
IPR012340NA-bd_OB-fold