mRNA_H-paniculata_contig20096.5173.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig20096.5173.1 vs. uniprot
Match: R7QDG7_CHOCR (Uncharacterized protein n=3 Tax=Chondrus crispus TaxID=2769 RepID=R7QDG7_CHOCR) HSP 1 Score: 125 bits (314), Expect = 5.740e-33 Identity = 65/131 (49.62%), Postives = 80/131 (61.07%), Query Frame = 1
Query: 13 YRSMVRSFMYASTGTRPDIAYAVHQGALHMEDPCREDLNTCKRIFRYLSSVPDLGITFGGKSNGHGLEGFVDADWAEDVEDRKSTTEYVLKLNGGAISWCSRKQQLVTWSSTEAEYVAAGEAGKETVYLRE 405
YR V S MY GTRPD+AYA+ + + H +PC KR+ RY+ +LGI F KS L GF DADWA + RKST+ YV K GGAISW SRKQ +V S+ EAEY+A EA KE +LR+
Sbjct: 31 YREAVGSLMYLMVGTRPDLAYAIGKLSQHSANPCESHWAGVKRVMRYVQGTRNLGIVFDNKSKSPELFGFSDADWAGCSDSRKSTSGYVFKFCGGAISWSSRKQTVVATSTCEAEYIALCEACKEATWLRQ 161
BLAST of mRNA_H-paniculata_contig20096.5173.1 vs. uniprot
Match: A0A182G509_AEDAL (Uncharacterized protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182G509_AEDAL) HSP 1 Score: 123 bits (309), Expect = 2.240e-32 Identity = 59/129 (45.74%), Postives = 82/129 (63.57%), Query Frame = 1
Query: 13 YRSMVRSFMYASTGTRPDIAYAVHQGALHMEDPCREDLNTCKRIFRYLSSVPDLGITFGGKSNGHGLEGFVDADWAEDVEDRKSTTEYVLKLNGGAISWCSRKQQLVTWSSTEAEYVAAGEAGKETVYL 399
YR ++ S M+ +GTRPDI +A+ A E+P +E KR+ RYLS D+G+ F + + L +VDADWA D+ DRKSTT + +K+ G + WCSRKQ +V SS EAEYVA +A KE ++L
Sbjct: 13 YRELIGSLMFLMSGTRPDICFALTYLARFQENPTQEHWQCLKRVLRYLSGTIDVGLQFSKRDDEPALSCYVDADWANDLVDRKSTTGFFIKVYGNVVQWCSRKQAIVALSSCEAEYVAVCDAAKEVLWL 141
BLAST of mRNA_H-paniculata_contig20096.5173.1 vs. uniprot
Match: A0A060SU91_PYCCI (Uncharacterized protein n=2 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SU91_PYCCI) HSP 1 Score: 124 bits (310), Expect = 4.140e-32 Identity = 68/134 (50.75%), Postives = 83/134 (61.94%), Query Frame = 1
Query: 13 YRSMVRSFMYASTGTRPDIAYAVHQGALHMEDPCREDLNTCKRIFRYLSSVPDLGITFGGKSNG---HGLE--GFVDADWAEDVEDRKSTTEYVLKLNGGAISWCSRKQQLVTWSSTEAEYVAAGEAGKETVYL 399
Y+S + + MYA G+RPDIA+AV + H P E N R+FRYL L +T+G HGL G+ DADWA D DR+ST+ YV KL GGAISWCSRKQQ + SSTEAEYVA A KE ++L
Sbjct: 54 YQSALGALMYAMLGSRPDIAFAVGTLSKHASTPGTEHWNALMRVFRYLRGTSGLRLTYGKDLKPLCEHGLTVVGYSDADWAGDRNDRRSTSAYVFKLGGGAISWCSRKQQSIAQSSTEAEYVALALAAKEGLWL 187
BLAST of mRNA_H-paniculata_contig20096.5173.1 vs. uniprot
Match: A0A7D9D5L2_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D5L2_PARCT) HSP 1 Score: 124 bits (310), Expect = 6.920e-32 Identity = 59/134 (44.03%), Postives = 85/134 (63.43%), Query Frame = 1
Query: 1 NSTEYRSMVRSFMYASTGTRPDIAYAVHQGALHMEDPCREDLNTCKRIFRYLSSVPDLGITFGGKSNGHGLEGFVDADWAEDVEDRKSTTEYVLKLNGGAISWCSRKQQLVTWSSTEAEYVAAGEAGKETVYLR 402
N+ EY+ ++ Y +T TRPD+A AV + M P +E + KR+ RY+ + G+ F GKS L G+ DADWA D++ R+ST+ YV ++NG +SWCS++Q VT S+TEAEYVA A +E V+LR
Sbjct: 82 NTNEYQKLIGCLTYVTTATRPDLASAVGILSKFMSKPSKEHWHGAKRVLRYIKDTVNYGLVFEGKSTKCSLIGYSDADWANDLDTRRSTSGYVFQINGSTVSWCSKRQPCVTRSTTEAEYVALSHATQEIVWLR 215
BLAST of mRNA_H-paniculata_contig20096.5173.1 vs. uniprot
Match: UPI0009AB427F (uncharacterized protein LOC109950541 n=1 Tax=Prunus persica TaxID=3760 RepID=UPI0009AB427F) HSP 1 Score: 123 bits (309), Expect = 1.510e-31 Identity = 65/134 (48.51%), Postives = 89/134 (66.42%), Query Frame = 1
Query: 1 NSTEYRSMVRSFMYASTGTRPDIAYAVHQGALHMEDPCREDLNTCKRIFRYLSSVPDLGITFGGKSNGHGLEGFVDADWAEDVEDRKSTTEYVLKLNGGAISWCSRKQQLVTWSSTEAEYVAAGEAGKETVYLR 402
+ST Y+ ++ S MY T TRPDI YAV + +ME P LN KRI RY+ D G+ F + +G G G+ D+D+A D++DRKST+ ++ LN GAISW S+KQQ+VT SSTEAEYVAA + + ++LR
Sbjct: 96 DSTFYKQIIGSLMYL-TYTRPDIMYAVSLVSRYMEKPTEMHLNAAKRILRYVKGTIDYGV-FYKREDGSGFVGYTDSDYAGDIDDRKSTSGHIFLLNSGAISWSSKKQQIVTLSSTEAEYVAAAASSCQAMWLR 227
BLAST of mRNA_H-paniculata_contig20096.5173.1 vs. uniprot
Match: A0A4Y9ZJA2_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZJA2_9AGAM) HSP 1 Score: 127 bits (320), Expect = 1.580e-31 Identity = 67/131 (51.15%), Postives = 80/131 (61.07%), Query Frame = 1
Query: 10 EYRSMVRSFMYASTGTRPDIAYAVHQGALHMEDPCREDLNTCKRIFRYLSSVPDLGITFGGKSNGHGLEGFVDADWAEDVEDRKSTTEYVLKLNGGAISWCSRKQQLVTWSSTEAEYVAAGEAGKETVYLR 402
+Y+S V S MYA GTRPDIAYAV + H P E N R F+YL D + + GK L G+VD+DWA D DR+S + YV L G AISW S+KQQ V SSTEAEY+AA A KE V+LR
Sbjct: 1186 KYQSAVGSLMYAMLGTRPDIAYAVGLLSQHSSAPGAEHWNVAARTFKYLRRTADYQLVYNGKRKNDELTGYVDSDWANDPNDRRSISGYVFTLAGAAISWSSKKQQSVAQSSTEAEYMAAAHATKEAVWLR 1316
BLAST of mRNA_H-paniculata_contig20096.5173.1 vs. uniprot
Match: UPI001E2788DD (secreted RxLR effector protein 161-like n=1 Tax=Harmonia axyridis TaxID=115357 RepID=UPI001E2788DD) HSP 1 Score: 118 bits (296), Expect = 2.000e-31 Identity = 60/130 (46.15%), Postives = 86/130 (66.15%), Query Frame = 1
Query: 13 YRSMVRSFMYASTGTRPDIAYAVHQGALHMEDPCREDLNTCKRIFRYLSSVPDLGITFGGKSNGHGLEGFVDADWAEDVEDRKSTTEYVLKLNGGAISWCSRKQQLVTWSSTEAEYVAAGEAGKETVYLR 402
YR V S M+A+ +RPDIAY+V + ++ P + N KRI RYL S +LGI + + + L GF D+D+A D + RKSTT Y+ KL+ G ++W S++QQ VT S+TEAEYVAA +A KE +++R
Sbjct: 27 YREAVGSLMFAAVVSRPDIAYSVGVASRYLNAPSKTHWNAVKRIIRYLKSTSELGIYY-SREDKLQLSGFSDSDYASDEDTRKSTTGYIFKLSNGDVTWSSKRQQAVTLSTTEAEYVAACQATKEAIWIR 155
BLAST of mRNA_H-paniculata_contig20096.5173.1 vs. uniprot
Match: A0A5D6YB57_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB57_9STRA) HSP 1 Score: 124 bits (312), Expect = 3.030e-31 Identity = 65/130 (50.00%), Postives = 82/130 (63.08%), Query Frame = 1
Query: 13 YRSMVRSFMYASTGTRPDIAYAVHQGALHMEDPCREDLNTCKRIFRYLSSVPDLGITFGGKSNGHGLEGFVDADWAEDVEDRKSTTEYVLKLNGGAISWCSRKQQLVTWSSTEAEYVAAGEAGKETVYLR 402
YRS V + MY GTRPD+A AV + DPC KR+ RYL + P GI F G +G L G+ DADWA D+E R+ST+ YV LNGG I+W S+KQ+ V SSTEAEY+A EA +E V+L+
Sbjct: 293 YRSAVGAVMYLMVGTRPDLAAAVGVLSQFAADPCPTHWQALKRVLRYLQATPTHGIRFAGSGDGE-LIGYSDADWAGDIETRRSTSGYVFVLNGGCITWRSKKQRTVALSSTEAEYMALSEATQEAVWLK 421
BLAST of mRNA_H-paniculata_contig20096.5173.1 vs. uniprot
Match: A0A090C2V0_HYAAE (RxLR effector candidate protein (Fragment) n=3 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=A0A090C2V0_HYAAE) HSP 1 Score: 121 bits (304), Expect = 3.450e-31 Identity = 62/130 (47.69%), Postives = 80/130 (61.54%), Query Frame = 1
Query: 13 YRSMVRSFMYASTGTRPDIAYAVHQGALHMEDPCREDLNTCKRIFRYLSSVPDLGITFGGKSNGHGLEGFVDADWAEDVEDRKSTTEYVLKLNGGAISWCSRKQQLVTWSSTEAEYVAAGEAGKETVYLR 402
YRS V MY TRPD+A AV + DPC KR+ RYL + P+ G+ F + G + G+ DADWA D+E R+ST+ YV +NGG ISW S+KQ+ V SSTEAEY+A EA KE V+L+
Sbjct: 37 YRSAVGGIMYLMVATRPDLAAAVGSLSQFSSDPCPTHWQALKRVLRYLQATPNHGLEF-TREEGSRICGYTDADWAGDIESRRSTSGYVFMMNGGCISWKSQKQRTVALSSTEAEYMALSEATKEAVWLK 165
BLAST of mRNA_H-paniculata_contig20096.5173.1 vs. uniprot
Match: A0A177UJU6_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Tilletia walkeri TaxID=117179 RepID=A0A177UJU6_9BASI) HSP 1 Score: 126 bits (316), Expect = 4.910e-31 Identity = 61/129 (47.29%), Postives = 82/129 (63.57%), Query Frame = 1
Query: 13 YRSMVRSFMYASTGTRPDIAYAVHQGALHMEDPCREDLNTCKRIFRYLSSVPDLGITFGGKSNGHGLEGFVDADWAEDVEDRKSTTEYVLKLNGGAISWCSRKQQLVTWSSTEAEYVAAGEAGKETVYL 399
YR++V Y + GTRPD+A+AV DP E + KR+ RY+ +TFGG + G+EG+VDADWA D +DR+ST+ +V + GGA+SW SRKQ V S+ EAEYVAAG AG+E + L
Sbjct: 484 YRAIVGCLAYLAQGTRPDLAFAVSTLGKFSSDPTEEHMEAAKRVLRYIRGTAGAKLTFGGDRSEEGVEGYVDADWAADRDDRRSTSGFVYTMAGGAVSWGSRKQGAVALSTAEAEYVAAGVAGREALLL 612 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20096.5173.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig20096.5173.1 >prot_H-paniculata_contig20096.5173.1 ID=prot_H-paniculata_contig20096.5173.1|Name=mRNA_H-paniculata_contig20096.5173.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=129bp MVRSFMYASTGTRPDIAYAVHQGALHMEDPCREDLNTCKRIFRYLSSVPDback to top mRNA from alignment at H-paniculata_contig20096:55..462- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig20096.5173.1 ID=mRNA_H-paniculata_contig20096.5173.1|Name=mRNA_H-paniculata_contig20096.5173.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=408bp|location=Sequence derived from alignment at H-paniculata_contig20096:55..462- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig20096:55..462- >mRNA_H-paniculata_contig20096.5173.1 ID=mRNA_H-paniculata_contig20096.5173.1|Name=mRNA_H-paniculata_contig20096.5173.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=774bp|location=Sequence derived from alignment at H-paniculata_contig20096:55..462- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |