mRNA_H-paniculata_contig10802.517.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig10802.517.1 vs. uniprot
Match: D8LR97_ECTSI (DIX domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR97_ECTSI) HSP 1 Score: 172 bits (437), Expect = 5.970e-50 Identity = 110/241 (45.64%), Postives = 122/241 (50.62%), Query Frame = 1 Query: 10 RYFIPSDGDDPAHPNVFQLPSGLVGSGEVRCADVRRHFPLRGRYHFRFKKKFKNAFVWVDMTDDEAVVPACDGVFTAKITRLSDGREGGAPXXXXXXXXXXXXXXXXXXYIQGMAPSASASIRRPVNSGGLGGYMEGVFGQGRGGTRADDLLNMEHLNSGARGGGGAGPIPGPGGMGEQPDDLLGMDVFYSTPAA-----------SGGSTSRAMPPHSPPMHPTPMVQIGAGSQGLRVGG 699 RYFIP+DGDDP+HPNVFQLPSGLVGSG VRC DV RHFPL GRYHFRFKKKF++AFVWVD+ D A VP+CDGVFTAKITRLSDGR GG P +RR V G DDLLNM H G G F S+P+ S +R MP SPPMHP PM Q+GA G+ VGG Sbjct: 3 RYFIPADGDDPSHPNVFQLPSGLVGSGSVRCGDVERHFPLPGRYHFRFKKKFRDAFVWVDIADPGAAVPSCDGVFTAKITRLSDGRGGGGVPPGRGEAM----------------PXXXXGVRRDVGGXXXXXXXXXXXFGG------DDLLNMGH-------GIAPGXXXXXXXXXXXXXXXXXXXXFDSSPSQGVPPQQTASVPSAAGAARPMP-RSPPMHPAPMSQMGAA--GVAVGG 211
BLAST of mRNA_H-paniculata_contig10802.517.1 vs. uniprot
Match: A0A2R5GFE7_9STRA (DIX domain-containing protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GFE7_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 1.320e-22 Identity = 46/82 (56.10%), Postives = 54/82 (65.85%), Query Frame = 1 Query: 13 YFIPSDGDDPAHPNVFQLPSGLVGSGEVRCADVRRHFPLRGRYHFRFKKKFKNAFVWVDMTDDEAVVPACDGVFTAKITRLS 258 YF+P DGDD AHPN F L +VR ADVR FPL G YH RFKK FKN +VW+D+ DD +VP +G AKI+RLS Sbjct: 8 YFVPEDGDDEAHPNFFSLSKPAA---KVRAADVRAAFPLPGAYHLRFKKAFKNTYVWLDVVDDGQIVPRFEGQIFAKISRLS 86
BLAST of mRNA_H-paniculata_contig10802.517.1 vs. uniprot
Match: A0A836CD85_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD85_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 1.530e-22 Identity = 43/60 (71.67%), Postives = 47/60 (78.33%), Query Frame = 1 Query: 10 RYFIPSDGDDPAHPNVFQLPSGLV--GSGEVRCADVRRHFPLRGRYHFRFKKKFKNAFVW 183 RYFIPSDGDD HPNVFQLPS V G+G +R DV RHFPL G YHFRFKKKF++ FVW Sbjct: 3 RYFIPSDGDDADHPNVFQLPSSAVSGGNGTLRLGDVMRHFPLPGTYHFRFKKKFRDGFVW 62
BLAST of mRNA_H-paniculata_contig10802.517.1 vs. uniprot
Match: A0A7S2RG08_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RG08_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 2.160e-21 Identity = 45/82 (54.88%), Postives = 56/82 (68.29%), Query Frame = 1 Query: 13 YFIPSDGDDPAHPNVFQLPSGLVGSGEVRCADVRRHFPLRGRYHFRFKKKFKNAFVWVDMTDDEAVVPACDGVFTAKITRLS 258 YF+P DGD+ HPNVF + S +VR DV++ FPL GRYHFRFKK FKN FVW+D+ DD VVP +G AK++R S Sbjct: 8 YFVPEDGDEEDHPNVFTISRP---SSKVRLGDVKKTFPLPGRYHFRFKKAFKNTFVWLDILDDYDVVPRFEGQLVAKVSRTS 86
BLAST of mRNA_H-paniculata_contig10802.517.1 vs. uniprot
Match: A0A813H049_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813H049_POLGL) HSP 1 Score: 90.1 bits (222), Expect = 9.060e-19 Identity = 39/87 (44.83%), Postives = 57/87 (65.52%), Query Frame = 1 Query: 13 YFIPSDGDDPAHPNVFQLPSGLVGSGEVRCADVRRHFPLRGRYHFRFKKKFKNAFVWVDMTDDEAVVPACDGVFTAKITRLSDGREG 273 YFIP DGDD HPN F++ G V+ ++R FPL G+YHFRF+ K++ VW+D+T++E++VP CD AK+ R++ G G Sbjct: 16 YFIPGDGDDADHPNTFEVQHQGPG---VKLREIRACFPLPGKYHFRFRMKWEAGHVWMDVTNEESIVPTCDDKIVAKVLRVNWGSSG 99
BLAST of mRNA_H-paniculata_contig10802.517.1 vs. uniprot
Match: A0A8J2WQP4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WQP4_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 1.290e-18 Identity = 42/83 (50.60%), Postives = 50/83 (60.24%), Query Frame = 1 Query: 10 RYFIPSDGDDPAHPNVFQLPSGLVGSGEVRCADVRRHFPLRGRYHFRFKKKFKNAFVWVDMTDDEAVVPACDGVFTAKITRLS 258 RY +P DGDD AHPNVF+L V G VR DVRRHFPL GR+H RF+++ VW D DD A P G K +RL+ Sbjct: 5 RYHVPEDGDDAAHPNVFEL----VSEGAVRVGDVRRHFPLPGRFHLRFRRRVAGLEVWADAADDAAPAPRLAGRILVKASRLA 83
BLAST of mRNA_H-paniculata_contig10802.517.1 vs. uniprot
Match: A0A4D9D8A1_9STRA (DIX domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D8A1_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 4.300e-18 Identity = 41/86 (47.67%), Postives = 56/86 (65.12%), Query Frame = 1 Query: 10 RYFIPSDGDDPAHPNVFQLPSGLVGSGEVRCADVRRHFPLRGRYHFRFKKKFKNA----FVWVDMTDDEAVVPACDGVFTAKITRL 255 RY+IP DGDD +HPN+F LP + +R DVR+HFPL G YHFRFK + VW+D+T+D A +P DG + AK++R+ Sbjct: 3 RYYIPGDGDDASHPNIFHLPPSVQQPPRLR--DVRQHFPLPGAYHFRFKTRLDGTPDKKAVWMDVTEDVAELPTFDGFYIAKVSRM 86
BLAST of mRNA_H-paniculata_contig10802.517.1 vs. uniprot
Match: D8M8I1_BLAHO (DIX domain-containing protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M8I1_BLAHO) HSP 1 Score: 87.8 bits (216), Expect = 9.250e-18 Identity = 38/81 (46.91%), Postives = 52/81 (64.20%), Query Frame = 1 Query: 13 YFIPSDGDDPAHPNVFQLPSGLVGSGEVRCADVRRHFPLRGRYHFRFKKKFKNAFVWVDMTDDEAVVPACDGVFTAKITRL 255 Y+IP DGD+ HPNV L + +V D+R FP+ G Y+FRFK+ FKN+++W D+T+D VVP DG+ K TRL Sbjct: 9 YYIPEDGDEADHPNVMTLDKN---ASQVTLKDIREAFPIPGTYYFRFKRTFKNSWIWFDVTEDSEVVPKFDGLIFVKATRL 86
BLAST of mRNA_H-paniculata_contig10802.517.1 vs. uniprot
Match: UPI0007114B76 (hypothetical protein n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI0007114B76) HSP 1 Score: 86.3 bits (212), Expect = 4.410e-17 Identity = 36/82 (43.90%), Postives = 52/82 (63.41%), Query Frame = 1 Query: 10 RYFIPSDGDDPAHPNVFQLPSGLVGSGEVRCADVRRHFPLRGRYHFRFKKKFKNAFVWVDMTDDEAVVPACDGVFTAKITRL 255 +Y+IP DGDD HPNV+ + S + D+R FP+ G Y+FRFK+ FK ++W D++ D+ VVP+ DG K+TRL Sbjct: 8 QYYIPEDGDDMDHPNVYSIDKK---STTITVTDIRNSFPIPGTYYFRFKRAFKKTWIWFDVSKDDEVVPSFDGTIMMKVTRL 86
BLAST of mRNA_H-paniculata_contig10802.517.1 vs. uniprot
Match: A0A7R9UFN1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFN1_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 1.700e-15 Identity = 39/82 (47.56%), Postives = 50/82 (60.98%), Query Frame = 1 Query: 1 MQNRYFIPSDGDDPAHPNVFQLPSGLVGSGEVRCADVRRHFPLRGRYHFRFKKKFKNAFVWVDMTDDEAVVPACDGVFTAKI 246 M RY+IP GDDP HPN F + + G V D++ FPL G + FRFKK ++N VW+D+TDD AVVP G AK+ Sbjct: 43 MLVRYYIPEHGDDPTHPNAFSMAAVRSSEG-VTLRDIKSAFPLPGDFVFRFKKNYQNGHVWMDVTDDGAVVPTFSGDIFAKV 123 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10802.517.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10802.517.1 >prot_H-paniculata_contig10802.517.1 ID=prot_H-paniculata_contig10802.517.1|Name=mRNA_H-paniculata_contig10802.517.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=247bp MQNRYFIPSDGDDPAHPNVFQLPSGLVGSGEVRCADVRRHFPLRGRYHFRback to top mRNA from alignment at H-paniculata_contig10802:1814..7994+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig10802.517.1 ID=mRNA_H-paniculata_contig10802.517.1|Name=mRNA_H-paniculata_contig10802.517.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6181bp|location=Sequence derived from alignment at H-paniculata_contig10802:1814..7994+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig10802:1814..7994+ >mRNA_H-paniculata_contig10802.517.1 ID=mRNA_H-paniculata_contig10802.517.1|Name=mRNA_H-paniculata_contig10802.517.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1482bp|location=Sequence derived from alignment at H-paniculata_contig10802:1814..7994+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |