prot_H-paniculata_contig20079.5167.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig20079.5167.1 vs. uniprot
Match: D8LBL3_ECTSI (Geranylgeranyl transferase type-2 subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBL3_ECTSI) HSP 1 Score: 77.8 bits (190), Expect = 7.980e-16 Identity = 35/40 (87.50%), Postives = 36/40 (90.00%), Query Frame = 0
Query: 1 MSGVYWGLMGMALMGRDLRAEMGAEELTEWVMRCQSEGGG 40
MSGVYWGLMGMALMGRDLR EMGAE+L WVMRCQ EGGG
Sbjct: 51 MSGVYWGLMGMALMGRDLRKEMGAEDLASWVMRCQHEGGG 90
BLAST of mRNA_H-paniculata_contig20079.5167.1 vs. uniprot
Match: A0A7S2GW51_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GW51_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 1.800e-11 Identity = 27/40 (67.50%), Postives = 31/40 (77.50%), Query Frame = 0
Query: 1 MSGVYWGLMGMALMGRDLRAEMGAEELTEWVMRCQSEGGG 40
MSGVYWGL MAL+GRDLR EM +EL EWV+ CQ + GG
Sbjct: 5 MSGVYWGLTAMALLGRDLREEMSIDELVEWVLSCQHDNGG 44
BLAST of mRNA_H-paniculata_contig20079.5167.1 vs. uniprot
Match: W7TU56_9STRA (Geranylgeranyl transferase type-2 subunit beta (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TU56_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 1.640e-8 Identity = 25/40 (62.50%), Postives = 28/40 (70.00%), Query Frame = 0
Query: 1 MSGVYWGLMGMALMGRDLRAEMGAEELTEWVMRCQSEGGG 40
MS VYW LMGMALMGR+L EM E+ EWV+ CQ GG
Sbjct: 76 MSAVYWALMGMALMGRNLEEEMELSEIVEWVLECQHPNGG 115
BLAST of mRNA_H-paniculata_contig20079.5167.1 vs. uniprot
Match: A0A4D9D171_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D171_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 2.030e-8 Identity = 25/40 (62.50%), Postives = 28/40 (70.00%), Query Frame = 0
Query: 1 MSGVYWGLMGMALMGRDLRAEMGAEELTEWVMRCQSEGGG 40
MS VYW LMGMALMGR+L EM E+ EWV+ CQ GG
Sbjct: 76 MSAVYWALMGMALMGRNLEEEMELSEIVEWVLGCQHPNGG 115
BLAST of mRNA_H-paniculata_contig20079.5167.1 vs. uniprot
Match: A0A836C9T0_9STRA (Geranylgeranyl transferase type-2 subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9T0_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 3.240e-8 Identity = 28/42 (66.67%), Postives = 33/42 (78.57%), Query Frame = 0
Query: 1 MSGVYWGLMGMALMGRDLRAEMGAE-ELTEWVMRCQ--SEGG 39
MSGVYWGLMG+ALMGRD++ EMG L +WVMRC +EGG
Sbjct: 33 MSGVYWGLMGLALMGRDVKEEMGGGGALADWVMRCYCPAEGG 74
BLAST of mRNA_H-paniculata_contig20079.5167.1 vs. uniprot
Match: A0A812Y2E5_SYMMI (Geranylgeranyl transferase type-2 subunit beta (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Y2E5_SYMMI) HSP 1 Score: 55.1 bits (131), Expect = 6.770e-8 Identity = 22/40 (55.00%), Postives = 29/40 (72.50%), Query Frame = 0
Query: 1 MSGVYWGLMGMALMGRDLRAEMGAEELTEWVMRCQSEGGG 40
MSGVYWGL M+L+G+DLR M +++ WVM C+ E GG
Sbjct: 1 MSGVYWGLTAMSLLGKDLRETMDIDQIVNWVMECKHESGG 40
BLAST of mRNA_H-paniculata_contig20079.5167.1 vs. uniprot
Match: F0YFP4_AURAN (Geranylgeranyl transferase type-2 subunit beta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFP4_AURAN) HSP 1 Score: 53.9 bits (128), Expect = 2.970e-7 Identity = 23/40 (57.50%), Postives = 28/40 (70.00%), Query Frame = 0
Query: 1 MSGVYWGLMGMALMGRDLRAEMGAEELTEWVMRCQSEGGG 40
MSGVYWGL MAL+GRD+ EM + + WV+RCQ GG
Sbjct: 49 MSGVYWGLTAMALLGRDVHKEMDGDAVVAWVLRCQHPCGG 88
BLAST of mRNA_H-paniculata_contig20079.5167.1 vs. uniprot
Match: A0A2V0PHV7_9CHLO (Geranylgeranyl transferase type-2 subunit beta n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PHV7_9CHLO) HSP 1 Score: 51.6 bits (122), Expect = 1.950e-6 Identity = 24/40 (60.00%), Postives = 28/40 (70.00%), Query Frame = 0
Query: 1 MSGVYWGLMGMALMGRDLRAEMGAEELTEWVMRCQSEGGG 40
MSG+YWGL MALMGR EM + + EWV RC+ EGGG
Sbjct: 50 MSGMYWGLTAMALMGR--LGEMDCDAVAEWVARCRKEGGG 87
BLAST of mRNA_H-paniculata_contig20079.5167.1 vs. uniprot
Match: A0A7S3Y0P3_HETAK (Geranylgeranyl transferase type-2 subunit beta n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0P3_HETAK) HSP 1 Score: 50.8 bits (120), Expect = 3.640e-6 Identity = 22/40 (55.00%), Postives = 27/40 (67.50%), Query Frame = 0
Query: 1 MSGVYWGLMGMALMGRDLRAEMGAEELTEWVMRCQSEGGG 40
MS VYWGL G+A MG+D + EL EWV+ CQ +GGG
Sbjct: 45 MSAVYWGLAGLATMGKDNVEGINKPELVEWVLSCQHDGGG 84
BLAST of mRNA_H-paniculata_contig20079.5167.1 vs. uniprot
Match: A0A0D2N2Y4_9CHLO (Protein geranylgeranyltransferase type II n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2N2Y4_9CHLO) HSP 1 Score: 48.1 bits (113), Expect = 3.260e-5 Identity = 21/40 (52.50%), Postives = 28/40 (70.00%), Query Frame = 0
Query: 1 MSGVYWGLMGMALMGRDLRAEMGAEELTEWVMRCQSEGGG 40
MSG+YWGL MAL+GR EM + + +WV+ CQ +GGG
Sbjct: 47 MSGMYWGLTAMALLGR--LEEMDTDAVAQWVLTCQKQGGG 84 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20079.5167.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig20079.5167.1 ID=prot_H-paniculata_contig20079.5167.1|Name=mRNA_H-paniculata_contig20079.5167.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=41bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
|