mRNA_H-paniculata_contig1080.516.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1080.516.1 vs. uniprot
Match: D7FXJ9_ECTSI (PAP_fibrillin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXJ9_ECTSI) HSP 1 Score: 203 bits (517), Expect = 2.340e-55 Identity = 122/272 (44.85%), Postives = 164/272 (60.29%), Query Frame = 3
Query: 459 GLSASNDGTTTGVGSTEEAKSNLLRLLVENGGTTLNEDVKAAIEVLVKLNPTPNPARAWSILTGDWNMIGADFVGTERTKNGIEATLGRLSFNIFEPTEVPVLLTSVTTFM--RLPSAQAAAESPDADDANYGIASNFVTRDGSELRGRVVLLARCTEDSSEADRMQIQFLRTKLEPDESQDLDAWRAVIG-RKAEDSEGADML----------------------DG----GVLSHEWTKSPLGTLDVLYVDEDVRITRGNMGALVVVTRM 1187
G++ + T+ V S E AKSNL L E+GG+TL E V AA+EVL NPT +PA+AW + +G+W +G DF GT RTK+G+E TLGRL FNIFEP +PVL+ ++ + R +A A ES NY I++ +V RDGS LRGRV + C ED S +R+ ++F + +EPDE QDLDAWR VIG R E ++ L DG G LS+E +SP G LD++Y+DE++R+TRG GALVVV R+
Sbjct: 38 GVALYSSATSDDVRSAEAAKSNLRSALAESGGSTLAEGVGAAVEVLANFNPTSSPAKAWPLHSGEWASVGEDFKGTTRTKDGVECTLGRLVFNIFEPVNLPVLIVAIKNTIGDRPENADPAYES------NYVISTRWVARDGSGLRGRVEISGTCWEDPSMPERVLVRFTKGSIEPDEGQDLDAWRKVIGVRDVEGTKDKGPLSTLKEKAARLMLKVVFGFQGPADGLGPRGELSYEMKRSPKGYLDIIYLDEEMRVTRGQQGALVVVDRV 303
BLAST of mRNA_H-paniculata_contig1080.516.1 vs. uniprot
Match: A0A835ZKX0_9STRA (PAP_fibrillin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKX0_9STRA) HSP 1 Score: 127 bits (320), Expect = 9.970e-29 Identity = 86/251 (34.26%), Postives = 130/251 (51.79%), Query Frame = 3
Query: 510 EAKSNLLRLLVENGGTTLNEDVKAAIEVLVKLNPTPNPARAWSILTGDWNMIGADFVGTERTKNGIEATLGRLSFNIFEPTEVPVLLTSVTTFMRLPSAQAAAESPDADDANYGIASNFVTRD---GSELRGRVVLLARCTEDSSEADRMQIQFLRTKLEPDESQDLDAWRAV-------------IGRKAED---------SEGADMLDGGVLSHEWTKSPLGTLDVLYVDEDVRITRGNMGALVVVTRM 1187
+AK L + L N G T N+ V A++ L K NPT + A +L G + G +F +R G E TLGRL+FN+FEPT++PV +T + + A+ + P + Y + ++FV R G ELRG V + C DS +A+R+++ F +L P + QDL W AV +G+K + AD GV + + P G LD+LY+D+ +R+TRGN G++VVV R+
Sbjct: 60 DAKEELAKQLQANEGDTKNDAVAVAVDALSKTNPTTDGALQRELLKGAFATTGFNFPDGKRGPLGWECTLGRLAFNLFEPTKLPVSITHIVNTLEDVPAERQGDRPG--ELTYDLVNSFVARSPESGVELRGEVAVSGVCWPDSKDANRLRVAFGAGELRPAQGQDLAEWEAVFKPREGKEKPRVPLGKKLTNLMLKLFMGFQPPADA-GQGVQRYTMNRPPEGYLDILYLDDALRVTRGNRGSIVVVERV 307
BLAST of mRNA_H-paniculata_contig1080.516.1 vs. uniprot
Match: A0A6H2NGX9_9CYAN (Fimbrial protein n=1 Tax=Leptolyngbya sp. LCM1.Bin17 TaxID=2480211 RepID=A0A6H2NGX9_9CYAN) HSP 1 Score: 112 bits (279), Expect = 8.350e-24 Identity = 86/254 (33.86%), Postives = 122/254 (48.03%), Query Frame = 3
Query: 507 EEAKSNLLRLLVENGGTTLNEDVKAAIEVLVKLNPTPNPARAWSILTGDWNMIGA-DFVGTERTKNG-IEATLGRLSFNIFEPTEVPVLLTSVTTFMRLPSAQAAAESPDADDANYGIASNFVTRDGS-ELRGRVVLLARCTEDSSEADRMQIQFLRTKLEPDESQDLDAWRAVIGRKAEDSEGADML-------------------------DGGVLSHEWTKSPLGTLDVLYVDEDVRITRGNMGALVVVTR 1184
++AK+ L + L +GG V AAIE LV LNPTP PA+A L GDW ++ A F G + +G TLGRL+FN+F+P ++ +++ V+ Q D + I +F T D L+GRV L C + + A ++Q+QF LEP D D W V G D + A L D G + + +SP GTL VLY+DED+RITRG G +++ R
Sbjct: 15 QQAKAALRQALQAHGGDPAQVPVAAAIERLVALNPTPAPAQATDRLVGDWRLVSAPSFPGGKPLADGRYSYTLGRLAFNMFQPQDMKLVINQVS--------QPVWPIADGPQHTHDIVVDFTTLDLEVPLQGRVRNLGIC--EPATASQLQVQFTGGVLEPAADSDRDHWHQVFG----DPDAAPRLGLTARLQGLVLKLMFGLVPPTPMAPDTGRIEFQMRRSPKGTLTVLYLDEDLRITRGEKGTVLICDR 254
BLAST of mRNA_H-paniculata_contig1080.516.1 vs. uniprot
Match: A0A6B3N4N3_9CYAN (Fimbrial protein n=4 Tax=Cyanobacteria TaxID=1117 RepID=A0A6B3N4N3_9CYAN) HSP 1 Score: 109 bits (272), Expect = 6.310e-23 Identity = 84/259 (32.43%), Postives = 131/259 (50.58%), Query Frame = 3
Query: 483 TTTGVGSTEEAKSNLLRLLVENGGTTLNEDVKAAIEVLVKLNPTPNPARAWSILTGDWNMIGA-DFVGTERTKNG-IEATLGRLSFNIFEPTEVPVLLTSVTTFMRLPSAQAAAESPDADDANYGIASNFVTRDGS--ELRGRVVLLARCTEDSSEADRMQIQFLRTKLEPDESQDLDAWRAVIGRKAEDSEG---------------------ADMLDGGVLSHEWTKSPLGTLDVLYVDEDVRITRGNMGALVVVTR 1184
T G E AK+ L + L NGG T +E V AAI+ L +LNPT PAR+ ++L +W +I A +F G ++ +G TLGRL+FN+F+PT++ +++ V +RL + ++ I F T D S +L G V C S ++Q++F L P E ++ W+ V G++ + S+ A D G +S +SP G+L++LY+DE++RITRG G L+V R
Sbjct: 2 TVLDTGKCETAKTALRQALAANGGNTKDEAVIAAIDNLTQLNPTTAPARSETLLDSEWLLINAPNFPGGKQLPDGKFTYTLGRLAFNMFQPTQLKLVIDRVLQPVRLLE--------NKQQRSHDIVVEFTTIDESFPKLTGIVHNQGVCHPISDT--KLQVKFTGGTLAPQEGTNIKDWQEVFGKQRQSSQKSWQERFISGFFRLMFGLVPPQAMNPDTGEVSFTMNRSPKGSLEILYLDEEMRITRGEKGTLLVCQR 250
BLAST of mRNA_H-paniculata_contig1080.516.1 vs. uniprot
Match: UPI00146A6814 (fimbrial protein n=1 Tax=Nodosilinea sp. P-1105 TaxID=2546229 RepID=UPI00146A6814) HSP 1 Score: 105 bits (261), Expect = 2.030e-21 Identity = 86/252 (34.13%), Postives = 123/252 (48.81%), Query Frame = 3
Query: 507 EEAKSNLLRLLVENGGTTLNEDVKAAIEVLVKLNPTPNPARAWSILTGDWNMIGA-DFVGTERTKNGIEA-TLGRLSFNIFEPTEVPVLLTSVTTFMRLPSAQAAAESPDADDANY--GIASNFVTRDGS-ELRGRVVLLARCTEDSSEADRMQIQFLRTKLEPDESQDLDAWRAVIGRK-AEDSEG--------------------ADMLDGGVLSHEWTKSPLGTLDVLYVDEDVRITRGNMGALVVVTR 1184
++AK+ L + L +GG V AAI L LNPTP PA+A L GDW +I A F G E +G + TLGRL+FN+F+P + +++ V+ + P AD A++ I +F T D L+GRV L C + A+++Q+QF LEP D D W V G A G A D G + + +SP G L++LY+D+D+RITRG G ++V R
Sbjct: 15 QQAKAALYQALQAHGGNPAQAPVAAAIARLATLNPTPAPAQATDRLEGDWRLISAPSFPGGELLADGCYSYTLGRLAFNMFQPQTLKLVIDQVSQPVW----------PIADGAHHTHDIVVDFTTLDLEVPLQGRVRNLGIC--QPATANQLQVQFTGGVLEPAVDSDRDHWHQVFGDPDASPRPGLKARLQGLVLKLMFGLVPPKAMAADTGRIEFQMRRSPKGRLEILYLDDDLRITRGEKGTILVCDR 254
BLAST of mRNA_H-paniculata_contig1080.516.1 vs. uniprot
Match: UPI001686A008 (fimbrial protein n=1 Tax=Richelia sinica TaxID=1357545 RepID=UPI001686A008) HSP 1 Score: 103 bits (258), Expect = 4.430e-21 Identity = 83/255 (32.55%), Postives = 123/255 (48.24%), Query Frame = 3
Query: 498 GSTEEAKSNLLRLLVENGGTTLNEDVKAAIEVLVKLNPTPNPARAWSILTGDWNMIGA-DFVGTERTKNGIEA-TLGRLSFNIFEPTEVPVLLTSVTTFMRLPSAQAAAESPDADDANYGIASNFVTRDGS--ELRGRVVLLARCTEDSSEADRMQIQFLRTKLEPDESQDLDAWRAVIGRKAEDSEGADM---------------------LDGGVLSHEWTKSPLGTLDVLYVDEDVRITRGNMGALVVVTRM 1187
G+ AK+ L + L GG T +E V AAI L LNPTP P + +L +W +I A F E+ +G A TLGRL+FN+F+PT++ V++ V +R + ++ I F T D S +LRG V L C S A +Q+QF L P + ++ WR V G + + E + LD G + +SP G L++LY+DE++RITRG G ++V R+
Sbjct: 6 GNVAAAKAALRQALTACGGNTKDETVLAAITNLQTLNPTPAPTHSGQLLDSNWLLISAPSFPQGEQLADGRFAYTLGRLAFNMFQPTKLRVVIDRVFQPVRYLG--------QGEQQSHDIVVEFTTIDESVPQLRGIVRNLGVCQPASDTA--LQVQFTGGVLTPQDMGQIEEWRRVFGEQGKPEETSLKEKFQTWLLKLMFGLVPPEGMNLDTGEIRFTMKRSPKGNLEILYLDEELRITRGEKGTVLVCERV 250
BLAST of mRNA_H-paniculata_contig1080.516.1 vs. uniprot
Match: A0A6B3MA84_9CYAN (Fimbrial protein n=1 Tax=Symploca sp. SIO2E9 TaxID=2607812 RepID=A0A6B3MA84_9CYAN) HSP 1 Score: 103 bits (258), Expect = 4.530e-21 Identity = 81/251 (32.27%), Postives = 127/251 (50.60%), Query Frame = 3
Query: 507 EEAKSNLLRLLVENGGTTLNEDVKAAIEVLVKLNPTPNPARAWSILTGDWNMIGA-DFVGTERTKNG-IEATLGRLSFNIFEPTEVPVLLTSVTTFMRLPSAQAAAESPDADDANYGIASNFVTRDGS--ELRGRVVLLARCTEDSSEADRMQIQFLRTKLEPDESQDLDAWRAVIGRKAEDSEG---------------------ADMLDGGVLSHEWTKSPLGTLDVLYVDEDVRITRGNMGALVVVTR 1184
E AK L + L +GG T +E V AAI+ L +LNPT PAR+ ++L W +I A +F G ++ +G TLGRL+FN+F+PT++ +++ V +RL + ++ I F T D S +L G V C S +Q++F L P E ++ W+AV G++ + + A D G +S +SP G+L++LY+D+++RITRGN G L+V R
Sbjct: 10 EAAKIALRQALAASGGNTKDEAVIAAIDNLTQLNPTTAPARSETLLDSQWLLINAPNFPGGKQLPDGKFTYTLGRLAFNMFQPTQLKLVIDRVLQPVRLLE--------NKQQRSHDIVVEFTTIDESFPKLSGIVKNQGVCHPISDTL--LQVKFTGGTLAPQEGMNIKDWQAVFGKQHQPGKKSWQEKLMSGFFKLIFGLVPPKAMNPDTGEVSFTMNRSPRGSLEILYLDQELRITRGNKGTLLVSER 250
BLAST of mRNA_H-paniculata_contig1080.516.1 vs. uniprot
Match: UPI001A03B4AE (Fimbrial protein n=1 Tax=filamentous cyanobacterium LEGE 11480 TaxID=2777977 RepID=UPI001A03B4AE) HSP 1 Score: 103 bits (256), Expect = 7.980e-21 Identity = 83/248 (33.47%), Postives = 120/248 (48.39%), Query Frame = 3
Query: 513 AKSNLLRLLVENGGTTLNEDVKAAIEVLVKLNPTPNPARAWSILTGDWNMIGA-DFVGTERTKNGIEA-TLGRLSFNIFEPTEVPVLLTSVTTFMRLPSAQAAAESPDADDANYGIASNF--VTRDGSELRGRVVLLARCTEDSSEADRMQIQFLRTKLEPDESQDLDAWRAVIGRKAEDSEG--ADMLDG------------------GVLSHEWTKSPLGTLDVLYVDEDVRITRGNMGALVVVTR 1184
AK NL L + G T N V AAIE LVKLNPT PAR ++ G W MI A F G + NG A +LGR+SF +F+P ++ V L V+ Q + + I + F V R + G V L C + D +++QF LEP D W+AV G ++ + A ++DG G++++E +SP G L +LY+D ++RIT+G G ++V TR
Sbjct: 11 AKLNLKNTLSHHAGDTKNAAVIAAIETLVKLNPTKAPARNAALRDGHWLMINAPSFPGGQPQANGQMAYSLGRMSFGMFQPKDLLVQLDRVS--------QPIEPIANTTQHTHDIIAEFTIVDRHQPTVSGVVKNLGICEPNGD--DTLRVQFTGGTLEPKADTDRADWQAVFGDQSAQPQPLKAKLMDGFLRLMFGLVGPTSMDTSTGIVTYEMRRSPKGNLKLLYLDNELRITKGEKGTVLVATR 248
BLAST of mRNA_H-paniculata_contig1080.516.1 vs. uniprot
Match: A0A1Z4N4X8_9CYAN (PAP_fibrillin domain-containing protein n=5 Tax=Nostocales TaxID=1161 RepID=A0A1Z4N4X8_9CYAN) HSP 1 Score: 102 bits (255), Expect = 1.110e-20 Identity = 83/252 (32.94%), Postives = 129/252 (51.19%), Query Frame = 3
Query: 507 EEAKSNLLRLLVENGGTTLNEDVKAAIEVLVKLNPTPNPARAWSILTGDWNMIGA-DFVGTERTKNGIEA-TLGRLSFNIFEPTEVPVLLTSVTTFMRLPSAQAAAESPDADDANYGIASNFVTRDGS--ELRGRVVLLARCTEDSSEADRMQIQFLRTKLEPDESQDLDAWRAVIGRKAEDS----------------------EGADMLDGGVLSHEWTKSPLGTLDVLYVDEDVRITRGNMGALVVVTR 1184
+ AK+ L + L +GG T +++V AAIE L LNP PAR+ ++L +W +I A +F G E+ +G TLGRL+FN+F+PT + V L V+ + L + + ++ I F T D S +L G V C S +Q++F L+P ++Q+L+ W+AV G + + +G D D G +S +SP G L++LYVDE++RITRG A++V R
Sbjct: 9 QAAKTALRQALAASGGNTKDKEVIAAIENLQSLNPITAPARSDTLLDSNWLLISAPNFPGGEQLADGSFCYTLGRLAFNMFQPTGLKVTLQRVSQPVFLLG--------NGEQHSHDIVVEFTTIDESVPKLSGIVRNQGVCQVVSDTT--LQVEFTGGILQPQDNQNLEEWKAVFGNQQPSARRSFKDILMSGFLNLMFGLVPPQGMDA-DTGEISFTMRRSPKGRLEILYVDEELRITRGEREAILVSER 249
BLAST of mRNA_H-paniculata_contig1080.516.1 vs. uniprot
Match: A0A1Z4UQ29_9CYAN (PAP_fibrillin domain-containing protein n=10 Tax=Sphaerospermopsis TaxID=752201 RepID=A0A1Z4UQ29_9CYAN) HSP 1 Score: 102 bits (255), Expect = 1.240e-20 Identity = 82/253 (32.41%), Postives = 126/253 (49.80%), Query Frame = 3
Query: 513 AKSNLLRLLVENGGTTLNEDVKAAIEVLVKLNPTPNPARAWSILTGDWNMIGA-DFVGTERTKNGIEA-TLGRLSFNIFEPTEVPVLLTSVTTFMRLPSAQAAAESPDADDANYGIASNFVTRDGS--ELRGRVVLLARCTEDSSEADRMQIQFLRTKLEPDESQDLDAWRAVIGR--KAEDSEGADMLDGGVL-------------------SHEWTKSPLGTLDVLYVDEDVRITRGNMGALVVVTRM*SD 1196
AK+ L ++L GG T +++V AAIE L NPT PA++ S++ +W +I A +F E NG A TLGRL+FN+F+PT++ +++ V Q + + + I F T D S +L G V+ C S +Q+QF L+P + +L+ W+AV K E D+L G L S +SP G L++LY+DE++RITRG G ++V R+ S+
Sbjct: 12 AKTELRQILAACGGNTKDQNVIAAIENLQSFNPTKAPAQSGSLMDSEWLLISAPNFPQGELLANGKYAYTLGRLAFNMFQPTKLKLVIDRVL--------QPVFPVGNGEQRTHDIVVEFTTIDESVPQLSGIVINQGICQSVSDTL--LQVQFTGGILKPQSTTNLEDWKAVFSEQGKPEKRSWQDILMSGFLKLMFGLVPPQTMNPETGEVSFMMNRSPKGRLEILYLDEELRITRGEKGTVLVCERLGSN 254 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1080.516.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1080.516.1 >prot_H-paniculata_contig1080.516.1 ID=prot_H-paniculata_contig1080.516.1|Name=mRNA_H-paniculata_contig1080.516.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=292bp MGVPSFLAIVVVLLSRMALVGAFLFPPTALVQHGSSHQHRCLSRTILNGLback to top mRNA from alignment at H-paniculata_contig1080:19579..28800- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1080.516.1 ID=mRNA_H-paniculata_contig1080.516.1|Name=mRNA_H-paniculata_contig1080.516.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9222bp|location=Sequence derived from alignment at H-paniculata_contig1080:19579..28800- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1080:19579..28800- >mRNA_H-paniculata_contig1080.516.1 ID=mRNA_H-paniculata_contig1080.516.1|Name=mRNA_H-paniculata_contig1080.516.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1752bp|location=Sequence derived from alignment at H-paniculata_contig1080:19579..28800- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |