mRNA_H-paniculata_contig2006.5160.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2006.5160.1
Unique NamemRNA_H-paniculata_contig2006.5160.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig2006.5160.1 vs. uniprot
Match: D7FR51_ECTSI (DNA topoisomerase VI subunit B-like protein Topoisomerase 6 subunit B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR51_ECTSI)

HSP 1 Score: 639 bits (1648), Expect = 5.220e-225
Identity = 324/424 (76.42%), Postives = 363/424 (85.61%), Query Frame = 1
Query:    1 LGVSTGEVLKSKSPAEFFADNQNIAGFDNAGKSLYTTIRELVENSLDAAESIGVLPLVSLSVEEFTEAEFNQYRGMENRDVVDTGLFKTTGGRKASAKNLKAVPASAEGGEDVAAEDPSRDGAKAGAGPDEDAVATAVATVAAKEKKGRSKGDS--LYYRVKCRDNGVGMPHAKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVRSGCSNDPDEAPDFVTKCVLDIDIYKNRPSVHEHVKLSNPEGWRGTELMVCVSGNWPTYKSRVLQYLQQLAIITPYAQLELEFKCHANPKKDLTAIYRRRSKQMPPLAYEVKHHPGSVNNLLIQQLIHRQACTNLLAFLTKELSSIEKSLAGRIITELGTGFDPKMRPSDLTVKDVARLAQMLKDVKRFKPPDGACLSPAGEYNLR 1266
            +G  +GE +KSKSPAEFFADNQNIAGFDNAGKSLYTTIRELVENSLDAAESIG LP +SL++EEFTE EFN++RGM+NRDVVD GLFK +GG+K+++K  KA+P  A   E+ +A+DP    A AGA     A        A  +KKGRSKGDS  LYYRVKC+DNGVGMPH KIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQV SGCS+D  + P+F+TKCVLDIDIYKNRPSVHEHVKL NPEGWRGTE+ VCVSGNW TYKSRVLQYLQQLAIITPYA+LELE+  HANPKKDLTA+YRRRS+QMPPLAYEVKHHPGSVNNLL+QQLIHR  C +L+ FL K+LSSI++ L+ RII ELG GF PKM+PS LTVK V+RL QML+DVKRFKPPDGACLSPAGEYNLR
Sbjct:    1 MGKGSGEAVKSKSPAEFFADNQNIAGFDNAGKSLYTTIRELVENSLDAAESIGALPHISLTIEEFTEEEFNEHRGMDNRDVVDAGLFKASGGKKSTSKATKALPKPAVA-EEGSADDPQEPSAAAGATA---ADLDPKEKKAKNDKKGRSKGDSHSLYYRVKCKDNGVGMPHDKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVVSGCSSDVKDPPNFLTKCVLDIDIYKNRPSVHEHVKLPNPEGWRGTEMTVCVSGNWQTYKSRVLQYLQQLAIITPYAELELEYHSHANPKKDLTAVYRRRSEQMPPLAYEVKHHPGSVNNLLVQQLIHRTKCKDLVGFLMKDLSSIDRPLSERIIAELGEGFHPKMQPSALTVKMVSRLTQMLRDVKRFKPPDGACLSPAGEYNLR 420          
BLAST of mRNA_H-paniculata_contig2006.5160.1 vs. uniprot
Match: A0A7S3XXL4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXL4_HETAK)

HSP 1 Score: 449 bits (1154), Expect = 2.600e-151
Identity = 245/438 (55.94%), Postives = 299/438 (68.26%), Query Frame = 1
Query:   19 EVLKSKSPAEFFADNQNIAGFDNAGKSLYTTIRELVENSLDAAESIGVLPLVSLSVEEFTEAEFNQYRGMENRDVVDTGLFKTTGGRKASAKNLKAVPASAEGGEDVAAEDPSRDGAKAGAGPDEDAVATAVATV-------------------AAKEKKGRSKGDS-LYYRVKCRDNGVGMPHAKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVRSGCSNDPDEAPDFVTKCVLDIDIYKNRPSVHEHVKLSNPEGWRGTELMVCVSGNWPTYKSRVLQYLQQLAIITPYAQLELEFKCHANPKKDLTAIYRRRSKQMPPLAYEVKHHPGSVNNLLIQQLIHR--QACTNLLAFLTKELSSIEKSLAGRIITELGTGFDPKMRPSDLTVKDVARLAQMLKDVKRFKPPDGACLSPAGEYNLR 1266
            EV K KSPAEFFA+NQNIAGFDN GKSLYTTIRELVEN+LDAAESI VLP + LS+EE T  EFN++RG +  +VVD+ LF +   ++  AK  K        GE  A   P    A+ GA  + D  AT+ A                     A    K + +GD  +YYR+ CRDNGVGM H  IP+MLG VLS SKYGVRQ RGK+G+G+KMALIWSKK+TG+PI++ SG S DP   P F++  VLDIDIYKN P VH+  KL NP+G RGT L V   G+W TY++RVL YLQQLAIITPYA+L  +F C  +P +DL  +YRRRS+QMPP A  VKHHP SVNNLL++QL+ +  +A   L+ FLT ELS +E+S+A RI+ ELG G+D KM    L+V  V +L QMLK VK F+PPDG CLSPAGEYNLR
Sbjct:   88 EVAKQKSPAEFFAENQNIAGFDNPGKSLYTTIRELVENALDAAESINVLPEIHLSIEEMTTEEFNKFRGRDTNEVVDSDLFASPS-KRGKAKKKKGK------GEMQA---PPPKAAEQGAPSEADTDATSAAAXXXXXXXXXXXXXXXXXXXXATPSTKKKRRGDEPMYYRIVCRDNGVGMAHEAIPNMLGRVLSGSKYGVRQTRGKFGLGSKMALIWSKKTTGMPIEITSGHSTDPAAPPAFLSHIVLDIDIYKNEPRVHKQEKLENPDGVRGTTLTVVTGGSWLTYRARVLAYLQQLAIITPYAELTFQFSCTGDPARDLGCVYRRRSRQMPPPALHVKHHPSSVNNLLLRQLLDQAPRASYKLVDFLTGELSCVERSVAKRIVAELGEGWDEKMDAKRLSVPQVHQLTQMLKSVKLFRPPDGDCLSPAGEYNLR 515          
BLAST of mRNA_H-paniculata_contig2006.5160.1 vs. uniprot
Match: A0A4D9CY99_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CY99_9STRA)

HSP 1 Score: 423 bits (1088), Expect = 6.740e-142
Identity = 222/418 (53.11%), Postives = 283/418 (67.70%), Query Frame = 1
Query:   19 EVLKSKSPAEFFADNQNIAGFDNAGKSLYTTIRELVENSLDAAESIGVLPLVSLSVEEFTEAEFNQYRGMENRDVVDTGLFKTTGGRKASAKNLKAVPASAEGGEDVAAEDPSRDGAKAGAGPDEDAVATAVA--TVAAKEKKGRSKGDSLYYRVKCRDNGVGMPHAKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVRSGCSNDPDEAPDFVTKCVLDIDIYKNRPSVHEHVKLSNPEGWRGTELMVCVSGNWPTYKSRVLQYLQQLAIITPYAQLELEFKCHANPKKDLTAIYRRRSKQMPPLAYEVKHHPGSVNNLLIQQLIHRQACTNLLAFLTKELSSIEKSLAGRIITELGTGFDPKMRPSDLTVKDVARLAQMLKDVKRFKPPDGACLSPAGEYNLR 1266
            EV++SK+PAEFF+++Q+I GFDN G+SLYTT+RELVEN+LDAAESI  LP VS+ +EE TE E N+ RGME+R+ VD GLF    G++ S   ++ V A  E  +++ +                DA+   V   + A   KK   +G   YYRV C DNG GM H KIPDMLG VLSSSKYGVRQ RGK+G+G+KMALIWSKKSTGLPI+VRS  S + +    +++ CVLDIDIY+N+P V  H K++N +GWRGT + V V GNW TYK+ ++ Y QQLAIITPYA +E  F+  +N  +++   Y RRS+ MPP A EVKHHP S+N+L+IQQLI R +    L FL  EL+ + + LA RI+ ELG GF   M P D+      RL  MLK V  FK PDG+CLSPAGEYNLR
Sbjct:    8 EVVESKTPAEFFSEHQSICGFDNPGRSLYTTVRELVENALDAAESIQALPHVSVVIEELTEDELNELRGMESRERVDLGLFHKATGKRRSGGEIREVLA--ENMKELHS----------------DALEKQVGQHSAALSNKKKGDRGARNYYRVTCEDNGCGMAHEKIPDMLGRVLSSSKYGVRQTRGKFGLGSKMALIWSKKSTGLPIEVRSAHSLEENHPAAYISHCVLDIDIYRNQPFVKLHEKVANIKGWRGTRIDVVVEGNWSTYKTHIMTYFQQLAIITPYAHMEFTFRTLSNASREVITQYARRSEHMPPPAQEVKHHPSSINHLIIQQLIKRTSTKTFLNFLCTELACVTRPLAARIVKELGNGFAENMVPEDIDANKTIRLTSMLKSVSIFKLPDGSCLSPAGEYNLR 407          
BLAST of mRNA_H-paniculata_contig2006.5160.1 vs. uniprot
Match: W7U7C7_9STRA (Dna topoisomerase 6 subunit b n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U7C7_9STRA)

HSP 1 Score: 421 bits (1083), Expect = 3.300e-138
Identity = 220/418 (52.63%), Postives = 283/418 (67.70%), Query Frame = 1
Query:   19 EVLKSKSPAEFFADNQNIAGFDNAGKSLYTTIRELVENSLDAAESIGVLPLVSLSVEEFTEAEFNQYRGMENRDVVDTGLFKTTGGRKASAKNLKAVPASAEGGEDVAAEDPSRDGAKAGAGPDEDAVATAVA--TVAAKEKKGRSKGDSLYYRVKCRDNGVGMPHAKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVRSGCSNDPDEAPDFVTKCVLDIDIYKNRPSVHEHVKLSNPEGWRGTELMVCVSGNWPTYKSRVLQYLQQLAIITPYAQLELEFKCHANPKKDLTAIYRRRSKQMPPLAYEVKHHPGSVNNLLIQQLIHRQACTNLLAFLTKELSSIEKSLAGRIITELGTGFDPKMRPSDLTVKDVARLAQMLKDVKRFKPPDGACLSPAGEYNLR 1266
            EV++SK+PAEFF+++Q+I GFDN G+SLYTT+RELVEN+LDAAESI  LP VS+ +EE TE E N+ RGME+R+ VD GLF    G++ S   ++ V A  E  +++ +                DA+   +   + A   KK   +G   YYRV C DNG GM H KIPDMLG VLSSSKYGVRQ RGK+G+G+KMALIWSKKSTGLPI+VRS  S + +    +++ CVLDIDIY+N+P V  H K++N +GWRGT + V V GNW TYK+ ++ Y QQLAIITPYA +E  F+  +N  +++   Y RRS+ MPP A EVKHHP S+N+L+IQQLI R +    L FL  EL+ + + LA RI+ ELG GF   M P D+      RL  MLK +  FK PDG+CLSPAGEYNLR
Sbjct:    8 EVVESKTPAEFFSEHQSICGFDNPGRSLYTTVRELVENALDAAESIQELPYVSVVIEEITEDELNELRGMESRERVDLGLFHKATGKRRSGGEIQEVLA--ENMKELHS----------------DALEKQMGQNSAALSNKKKGDRGARNYYRVTCEDNGCGMAHEKIPDMLGRVLSSSKYGVRQTRGKFGLGSKMALIWSKKSTGLPIEVRSAHSLEENHPAAYISHCVLDIDIYRNQPFVKLHEKVANIKGWRGTRIDVVVEGNWSTYKTHIMTYFQQLAIITPYAHMEFTFRTLSNASREVITQYARRSEHMPPPAQEVKHHPSSINHLIIQQLIKRTSTKTFLNFLCTELACVTRPLAARIVKELGNGFAENMVPEDIDANKTIRLTSMLKSISIFKLPDGSCLSPAGEYNLR 407          
BLAST of mRNA_H-paniculata_contig2006.5160.1 vs. uniprot
Match: A0A7S2XJE4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XJE4_9STRA)

HSP 1 Score: 404 bits (1039), Expect = 1.450e-131
Identity = 224/425 (52.71%), Postives = 279/425 (65.65%), Query Frame = 1
Query:   19 EVLKSKSPAEFFADNQNIAGFDNAGKSLYTTIRELVENSLDAAESIGVLPLVSLSVEEFTEAEFNQYRGMENRDVVDTGLFKTTGGRKASA--KNLKAVPASAEGGEDVAAEDPSRDGAKAGAGPDEDAVATAVATVAAKEKKGRSKGDSLYYRVKCRDNGVGMPHAKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVRSGCSNDPDEAP-DFVTKCVLDIDIYKNRPSVHEHVKLSNPEG--WRGTELMVCVSGNWPTYKSRVLQYLQQLAIITPYAQLELEFKCHANPKKDLTAIYRRRSKQMPPLAYEVKHHPGSVNNLLIQQLIHRQACTNLLAFLTKELSSIEKSLAGRIITEL-GTG----FDPKMRPSDLTVKDVARLAQMLKDVKRFKPPDGACLSPAGEYNL 1263
            EV  SKSPAEFFA+NQ IAGFDN GKSLYTT+REL+ENSLDA ES+ VLP +S+++EE T+++FN+ RG++     + G     G +      K      + + GG   A  DP               V+ A   V + +KK ++  ++ Y+ +  RDNG GM H  IP++LG VLS SKYGVRQ RGK+G+GAKMALIWSKKSTG+PI + +   N+    P +F++KCVLDIDIYKNRP V EH K  N     W GTE  V ++GNW TYKSRV+QYLQQLAIITPYA LEL +   ++ K+     Y RRS+QMPP + EVKHHP SVNNLLIQQL+ R  C   L FL  ELSSI  SLA R+I EL GT     FD  M P+D+T K +  L QML+ V+ FK PDG+CLSP GEYNL
Sbjct:   17 EVQVSKSPAEFFAENQAIAGFDNMGKSLYTTLRELIENSLDACESVNVLPNISVTIEEMTQSQFNKVRGLKTSSSAENGFDNDDGIKDIDLFMKKSNKRKSKSTGGASEAPTDP---------------VSGAPEEVGSTKKKRKANAEA-YFHITVRDNGCGMSHEAIPNLLGRVLSGSKYGVRQTRGKFGLGAKMALIWSKKSTGVPITITTAHMNNDQGTPGEFISKCVLDIDIYKNRPRVIEHSKQPNNSDSPWIGTEFQVLIAGNWTTYKSRVVQYLQQLAIITPYAMLELNYTNASDAKRSFGIRYERRSEQMPPPSKEVKHHPSSVNNLLIQQLLERSRCKTFLKFLCTELSSISPSLAKRLIAELKGTQSDAEFDEDMSPADVTDKQITILVQMLRSVELFKAPDGSCLSPLGEYNL 425          
BLAST of mRNA_H-paniculata_contig2006.5160.1 vs. uniprot
Match: A0A1E7FFR2_9STRA (Topo-VIb_trans-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FFR2_9STRA)

HSP 1 Score: 397 bits (1021), Expect = 3.240e-129
Identity = 211/420 (50.24%), Postives = 277/420 (65.95%), Query Frame = 1
Query:    4 GVSTGEVLKSKSPAEFFADNQNIAGFDNAGKSLYTTIRELVENSLDAAESIGVLPLVSLSVEEFTEAEFNQYRGMENRDVVDTGLFKTTGGRKASAKNLKAVPASAEGGEDVAAEDPSRDGAKAGAGPDEDAVATAVATVAAKEKKGRSKGDSLYYRVKCRDNGVGMPHAKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVRSGCSNDPDEAPDFVTKCVLDIDIYKNRPSVHEHVKLSNPEGWRGTELMVCVSGNWPTYKSRVLQYLQQLAIITPYAQLELEFKCHANPKKDLTAIYRRRSKQMPPLAYEVKHHPGSVNNLLIQQLIHRQACTNLLAFLTKELSSIEKSLAGRIITELGTGFDPKMRPSDLTVKDVARLAQMLKDVKRFKPPDGACLSPAGEYNL 1263
            G   GE+ + KSPAEFFADNQ IAGFDN GKSLYT+IRELVENSLDA ESIGVLP + + +EE  + EFN+ RG+      D  LF+  GG+  S+               V++    + G     G D+D+  T         KK   +G   Y+++K +DNG GM H KIPD+LG VLS SKYGVRQ RGK+G+GAKMALIWSKKSTG+PI++ +  S         V+ CVLDI+I  N P++ +H K  N   W GTEL + ++GNW TY+SR++ Y QQLAIITPY QLEL ++  + P++++T  + RRS+QMPPL  E+KHHP SVNN+++ QLI R  C  ++ FLTKELS + + LA RI+TE G   D  + PSD+T + + +L Q+L+ VK FK PDG+CLSP GEYNL
Sbjct:   11 GEGRGEIQRQKSPAEFFADNQAIAGFDNYGKSLYTSIRELVENSLDACESIGVLPTIQVYIEELNQDEFNKIRGISVA-TKDVELFQQKGGKGNSSAGA------------VSSAKKKKAGVNGSGGNDKDSKPTKTP-----RKKASQEG---YFQLKVKDNGCGMNHEKIPDLLGRVLSGSKYGVRQTRGKFGLGAKMALIWSKKSTGVPIKITTAHS---------VSICVLDINITNNCPNIIQHTKSKNTTEWVGTELELLIAGNWTTYRSRIVSYFQQLAIITPYCQLELVYENRSEPQRNMTLRHDRRSEQMPPLPREIKHHPSSVNNIIVSQLIERSNCKTIIDFLTKELSCVTRPLAQRIVTECGWDEDDIVNPSDMTSRQLTKLVQVLRTVKMFKAPDGSCLSPLGEYNL 400          
BLAST of mRNA_H-paniculata_contig2006.5160.1 vs. uniprot
Match: A0A6V2BFB6_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2BFB6_9STRA)

HSP 1 Score: 394 bits (1013), Expect = 9.860e-128
Identity = 211/442 (47.74%), Postives = 272/442 (61.54%), Query Frame = 1
Query:    4 GVSTGEVLKSKSPAEFFADNQNIAGFDNAGKSLYTTIRELVENSLDAAESIGVLPLVSLSVEEFTEAEFNQYRGMENRDVV------------DTGLFKTTGGRKASAKNLKAVPASAEGGEDVAAEDPSRDGAKAGAGPDEDAVATAVATVAAKEKKGRSKGDSLYYRVKCRDNGVGMPHAKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVRSGC----------SNDPDEAPDFVTKCVLDIDIYKNRPSVHEHVKLSNPEGWRGTELMVCVSGNWPTYKSRVLQYLQQLAIITPYAQLELEFKCHANPKKDLTAIYRRRSKQMPPLAYEVKHHPGSVNNLLIQQLIHRQACTNLLAFLTKELSSIEKSLAGRIITELGTGFDPKMRPSDLTVKDVARLAQMLKDVKRFKPPDGACLSPAGEYNL 1263
            G    EV +SKSPAEFFA+NQ IAGFDN GKSLYTT+REL+ENSLDA ES+ VLP + L++EE ++++FN  RG+  + +             D+    TT G+K+S K+                                             E K  ++    Y+ +  RDNG GM H  IP++LG VLS SKYGVRQ RGK+G+GAKMALIWSKKSTG+PI++++            S D +     ++ CVLDIDIYKNRP V EH K+ N EGW GT   V ++GNW TYKSR++QYLQQLAIITPYA+LE+ +    + KKD+   Y RRS+QMPP A EVKHHP SVNNLL+QQL+ R  C  +L FL+ +LSS+  +LA RII EL    D  M P+D+  K + R+ Q+L+   +FK PDG+CLSP GEYNL
Sbjct:   28 GHDENEVQQSKSPAEFFAENQAIAGFDNMGKSLYTTVRELIENSLDACESVNVLPDIQLNIEEMSQSQFNVLRGVTVKKLGNNETGTNAPVPDDSDAMTTTQGQKSSNKS--------------------------------------------NETKKSNRSAESYFLISVRDNGCGMAHDAIPNLLGRVLSGSKYGVRQTRGKFGLGAKMALIWSKKSTGVPIKIKTSHFGASDHKRHESGDDNRFGQEISTCVLDIDIYKNRPRVIEHTKVPNKEGWVGTLFEVLIAGNWTTYKSRIVQYLQQLAIITPYAKLEMRYSNRFDAKKDMAIRYDRRSEQMPPPAREVKHHPSSVNNLLVQQLLERSKCKTILKFLSTDLSSVTPALAKRIIDELDDDLDESMSPADVNDKQITRIVQLLRGSDQFKSPDGSCLSPLGEYNL 425          
BLAST of mRNA_H-paniculata_contig2006.5160.1 vs. uniprot
Match: A0A7S3LRB3_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LRB3_9STRA)

HSP 1 Score: 391 bits (1004), Expect = 1.080e-126
Identity = 207/418 (49.52%), Postives = 260/418 (62.20%), Query Frame = 1
Query:   25 LKSKSPAEFFADNQNIAGFDNAGKSLYTTIRELVENSLDAAESIGVLPLVSLSVEEFTEAEFNQYRGMENRDVVDTGLFKTTGGRKASAKNLKAVPASAEGGEDVAAEDPSRDGAKAGAGPDEDAVATAVATVAAKEKKGRSKGDSLYYRVKCRDNGVGMPHAKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVRSGCSNDPDEAPDFVTKCVLDIDIYKNRPSVHEHVKLSNPEGWRGTELMVCVSGNWPTYKSRVLQYLQQLAIITPYAQLELEFKCHANPKKDLTAIYRRRSKQMPPLAYEVKHHPGSVNNLLIQQLIHRQACTNLLAFLTKELSSIEKSLAGRIITEL----GTGFDPKMRPSDLTVKDVARLAQMLKDVKRFKPPDGACLSPAGEYNLR 1266
            LK KSPAEFFA+NQNIAGFDN GK+LYTT+RELVENSLDAAESI  LP V L + E +   F+Q +G+  +D VD  L++   G+K   K                                                  +S+G   Y+++ C+DNG GM H +IPDM G VL+ SKYGV+QARGK+G+GAKMALIWSKKSTGLPI+++S  +N+PDE+ DF+T C+LDIDI+KN P++  H K+ N E W G+E+ V +SGNW TYKSRVL Y++ LA+ITPYA   LEF C  NPKK  T  YRRRS+QM  LA EVKHHP SV+NL+++QL++      L   L  +L  I K LA R+I EL       FD     S +  + V +L  ML D   F PPD  CLSPAGEYNLR
Sbjct:   28 LKFKSPAEFFAENQNIAGFDNPGKALYTTVRELVENSLDAAESIRTLPEVHLKITELSNKSFSQAQGLSVQDRVDKALYR---GKKKGKKXXXXXX-----------------------------XXXXXXXXXXXXANSKSQGSQKYFKLVCKDNGCGMKHERIPDMFGRVLAGSKYGVKQARGKFGLGAKMALIWSKKSTGLPIEIKSSHTNNPDESSDFITHCILDIDIHKNEPNIRVHEKVPNDEAWHGSEVAVTISGNWKTYKSRVLNYMELLAVITPYAHFTLEFICEDNPKKSFTMDYRRRSEQMCKLAKEVKHHPKSVDNLIVRQLLNMTKKKTLEQCLCSDLQGINKPLAKRLIDELEQLTDQNFDRDTLCSRIDTRTVQQLTAMLNDTNVFAPPDSRCLSPAGEYNLR 413          
BLAST of mRNA_H-paniculata_contig2006.5160.1 vs. uniprot
Match: A0A7S2S2M8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2M8_9STRA)

HSP 1 Score: 390 bits (1003), Expect = 4.500e-126
Identity = 216/440 (49.09%), Postives = 277/440 (62.95%), Query Frame = 1
Query:   16 GEVLKSKSPAEFFADNQNIAGFDNAGKSLYTTIRELVENSLDAAESIGVLPLVSLSVEEFTEAEFNQYRGMENRDVVDTGLFKTTGGRKASAKNLKAVPASAEGGEDVAAEDPSRDGAKAGAGPDEDAVATAVATVAAKEKKGRSKGDSLYYRVKCRDNGVGMPHAKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVRSGCSNDPDEAPDFVTKCVLDIDIYKNRPSVHEHVKLSNPEGWRGTELMVCVSGNWPTYKSRVLQYLQQLAIITPYAQLELEFKCH---------------------ANPKKDLTAIYRRRSKQMPPLAYEVKHHPGSVNNLLIQQLIHRQACTNLLAFLTKELSSIEKSLAGRIITELGTGFDPKMRPSDLTV--KDVARLAQMLKDVKRFKPPDGACLSPAGEYNLR 1266
            GE ++SKSPAEFFA+NQ IAGFDN GKSLYT+IRELVENSLDAAES+ VLP + L++ E +EA+FN  RG++     + G  +  G      K  K    S EGG   A +D   +GA                          S+   +YYRV C+DNG GMPH  IP+MLG VLS SKYGVRQ RGK+G+GAKMALIW+KKSTGLPI+VRS  + D  E P  V++CVLDIDI++N P V  H K +NP+GWRGTE+ V V GNW +Y+S+V+ Y QQLA+ITPYA L+L+F                        ++  ++L   Y RRS Q+PPL  EVKHHP SV+NLLIQQL+ R    +L++FL ++L  +   +A R+  ELG   +  + P D+    K V  + Q+L+DV  FK PDG+CLSPAGEYNLR
Sbjct:    5 GESVRSKSPAEFFAENQIIAGFDNPGKSLYTSIRELVENSLDAAESLCVLPDIELTITELSEAQFNAQRGVKT--AGNRGDLELFGSSTKKGKGSK----SKEGGSVEAQDDGVEEGADLSQSLXXXXXXXXXXXXXXXXXXAGSRSQVMYYRVTCKDNGCGMPHQAIPEMLGRVLSGSKYGVRQTRGKFGLGAKMALIWAKKSTGLPIEVRSAHTKDASEPPRSVSECVLDIDIHRNEPQVQRHTKQANPDGWRGTEITVTVGGNWTSYRSKVVSYFQQLAVITPYADLKLKFNSEGSSADGSTPLSPGLGVTESSTSSSARNLEVHYSRRSDQIPPLPSEVKHHPSSVDNLLIQQLLVRTKSKSLVSFLQRDLQGVTSGVAERVAAELGDWAEDTL-PQDIATNNKRVNAITQVLRDVTLFKSPDGSCLSPAGEYNLR 437          
BLAST of mRNA_H-paniculata_contig2006.5160.1 vs. uniprot
Match: B7G6Z7_PHATC (Type II DNA topoisomerase 6 subunit n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G6Z7_PHATC)

HSP 1 Score: 388 bits (996), Expect = 9.770e-126
Identity = 213/421 (50.59%), Postives = 266/421 (63.18%), Query Frame = 1
Query:    7 VSTGEVLKSKSPAEFFADNQNIAGFDNAGKSLYTTIRELVENSLDAAESIGVLPLVSLSVEEFTEAEFNQYRGMEN--RDVVDTGLFKTTGGRKASAKNLKAVPASAEGGEDVAAEDPSRDGAKAGAGPDEDAVATAVATVAAKEKKGRSKGDSLYYRVKCRDNGVGMPHAKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVRSGCSNDPDEAPDFVTKCVLDIDIYKNRPSVHEHVKLSNPEGWRGTELMVCVSGNWPTYKSRVLQYLQQLAIITPYAQLELEFKCHANPKKDLTAIYRRRSKQMPPLAYEVKHHPGSVNNLLIQQLIHRQACTNLLAFLTKELSSIEKSLAGRIITELGTGFDPKMRPSDLTVKDVARLAQMLKDVKRFKPPDGACLSPAGEYNL 1263
             S GEV   KSPAEFFA+NQ IAGFDN GKSLYT++RELVENSLDA ESI  LP +S+ ++E+T+ EFN    M+   R   D  LF+T    K   K    V                          DE      + TV    KK +      Y+++  +DNG GM H+ IP++LG VLS SKYGVRQ RGK+G+GAKMALIW+KKSTG PI++ +    D   AP+  + CVLDIDIYKN P + EH    N +GW GTE+ V ++GNW TYKSR++QYLQQLAIITPYA LEL +   ++ K++L   Y RRS QMPP A  +KHHP SVNNL+IQQLI       L  FL+ ELS++   LA R++TELG  FD  M PS L  K++ RL Q+L+ V+ FK PDG+CLSP GEYNL
Sbjct:   11 ASAGEVQVQKSPAEFFAENQAIAGFDNLGKSLYTSLRELVENSLDACESIHELPEISIEIKEYTQEEFNALDVMKTSPRKKRDMQLFETKKKDKKPPKEATDV--------------------------DE------ITTVENSGKKRKKAPQDAYFKLTVKDNGCGMSHSAIPNLLGRVLSGSKYGVRQTRGKFGLGAKMALIWAKKSTGQPIRIMTSHRPDGGVAPERASACVLDIDIYKNAPRILEHTTRKNTDGWMGTEMSVLIAGNWTTYKSRIVQYLQQLAIITPYAVLELAYINISDSKRNLHVRYDRRSDQMPPPAKTIKHHPASVNNLVIQQLIQFTKTRTLFKFLSTELSTVSPPLARRLVTELG--FDESMPPSSLEDKEITRLVQLLRQVQLFKAPDGSCLSPLGEYNL 397          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2006.5160.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR51_ECTSI5.220e-22576.42DNA topoisomerase VI subunit B-like protein Topois... [more]
A0A7S3XXL4_HETAK2.600e-15155.94Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A4D9CY99_9STRA6.740e-14253.11Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7U7C7_9STRA3.300e-13852.63Dna topoisomerase 6 subunit b n=1 Tax=Nannochlorop... [more]
A0A7S2XJE4_9STRA1.450e-13152.71Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A1E7FFR2_9STRA3.240e-12950.24Topo-VIb_trans-domain-containing protein n=1 Tax=F... [more]
A0A6V2BFB6_9STRA9.860e-12847.74Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S3LRB3_9STRA1.080e-12649.52Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A7S2S2M8_9STRA4.500e-12649.09Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
B7G6Z7_PHATC9.770e-12650.59Type II DNA topoisomerase 6 subunit n=1 Tax=Phaeod... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2006contigH-paniculata_contig2006:7735..12986 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score380.9
Seed ortholog evalue7.5e-103
Seed eggNOG ortholog2850.Phatr15042
Preferred nameTOP6B
KEGG koko:K03167
Hectar predicted targeting categoryother localisation
GOsGO:0000902,GO:0003674,GO:0003735,GO:0003824,GO:0003916,GO:0003918,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0007049,GO:0007275,GO:0007389,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009330,GO:0009653,GO:0009719,GO:0009725,GO:0009741,GO:0009888,GO:0009987,GO:0010026,GO:0010033,GO:0010467,GO:0014070,GO:0015935,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017111,GO:0019538,GO:0022402,GO:0022613,GO:0030154,GO:0032501,GO:0032502,GO:0032989,GO:0032991,GO:0033993,GO:0034641,GO:0034645,GO:0042023,GO:0042221,GO:0042254,GO:0042623,GO:0042802,GO:0042803,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0044786,GO:0046483,GO:0046983,GO:0048856,GO:0048869,GO:0050896,GO:0061505,GO:0071704,GO:0071840,GO:0090304,GO:0090558,GO:0140097,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1990904
EggNOG free text desc.Topoisomerase VI B subunit, transducer
EggNOG OGs2QQC0@2759,2XB30@2836,COG1389@1
EC5.99.1.3
COG Functional cat.L
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03032
Exons9
Model size1269
Cds size1269
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929514.2163937-CDS-H-paniculata_contig2006:7734..79121622929514.2163937-CDS-H-paniculata_contig2006:7734..7912Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2006 7735..7912 -
1691480894.0256453-CDS-H-paniculata_contig2006:7734..79121691480894.0256453-CDS-H-paniculata_contig2006:7734..7912Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2006 7735..7912 -
1622929514.2348356-CDS-H-paniculata_contig2006:8228..82781622929514.2348356-CDS-H-paniculata_contig2006:8228..8278Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2006 8229..8278 -
1691480894.035411-CDS-H-paniculata_contig2006:8228..82781691480894.035411-CDS-H-paniculata_contig2006:8228..8278Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2006 8229..8278 -
1622929514.253938-CDS-H-paniculata_contig2006:8480..86781622929514.253938-CDS-H-paniculata_contig2006:8480..8678Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2006 8481..8678 -
1691480894.0441675-CDS-H-paniculata_contig2006:8480..86781691480894.0441675-CDS-H-paniculata_contig2006:8480..8678Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2006 8481..8678 -
1622929514.2892008-CDS-H-paniculata_contig2006:10190..102621622929514.2892008-CDS-H-paniculata_contig2006:10190..10262Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2006 10191..10262 -
1691480894.0566697-CDS-H-paniculata_contig2006:10190..102621691480894.0566697-CDS-H-paniculata_contig2006:10190..10262Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2006 10191..10262 -
1622929514.309618-CDS-H-paniculata_contig2006:10562..106881622929514.309618-CDS-H-paniculata_contig2006:10562..10688Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2006 10563..10688 -
1691480894.0758386-CDS-H-paniculata_contig2006:10562..106881691480894.0758386-CDS-H-paniculata_contig2006:10562..10688Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2006 10563..10688 -
1622929514.3302605-CDS-H-paniculata_contig2006:10982..111111622929514.3302605-CDS-H-paniculata_contig2006:10982..11111Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2006 10983..11111 -
1691480894.0925865-CDS-H-paniculata_contig2006:10982..111111691480894.0925865-CDS-H-paniculata_contig2006:10982..11111Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2006 10983..11111 -
1622929514.349073-CDS-H-paniculata_contig2006:11378..116301622929514.349073-CDS-H-paniculata_contig2006:11378..11630Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2006 11379..11630 -
1691480894.1058123-CDS-H-paniculata_contig2006:11378..116301691480894.1058123-CDS-H-paniculata_contig2006:11378..11630Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2006 11379..11630 -
1622929514.366052-CDS-H-paniculata_contig2006:12360..125371622929514.366052-CDS-H-paniculata_contig2006:12360..12537Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2006 12361..12537 -
1691480894.1225088-CDS-H-paniculata_contig2006:12360..125371691480894.1225088-CDS-H-paniculata_contig2006:12360..12537Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2006 12361..12537 -
1622929514.383853-CDS-H-paniculata_contig2006:12899..129861622929514.383853-CDS-H-paniculata_contig2006:12899..12986Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2006 12900..12986 -
1691480894.1309853-CDS-H-paniculata_contig2006:12899..129861691480894.1309853-CDS-H-paniculata_contig2006:12899..12986Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2006 12900..12986 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2006.5160.1prot_H-paniculata_contig2006.5160.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2006 7735..12986 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2006.5160.1

>prot_H-paniculata_contig2006.5160.1 ID=prot_H-paniculata_contig2006.5160.1|Name=mRNA_H-paniculata_contig2006.5160.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=423bp
LGVSTGEVLKSKSPAEFFADNQNIAGFDNAGKSLYTTIRELVENSLDAAE
SIGVLPLVSLSVEEFTEAEFNQYRGMENRDVVDTGLFKTTGGRKASAKNL
KAVPASAEGGEDVAAEDPSRDGAKAGAGPDEDAVATAVATVAAKEKKGRS
KGDSLYYRVKCRDNGVGMPHAKIPDMLGVVLSSSKYGVRQARGKYGMGAK
MALIWSKKSTGLPIQVRSGCSNDPDEAPDFVTKCVLDIDIYKNRPSVHEH
VKLSNPEGWRGTELMVCVSGNWPTYKSRVLQYLQQLAIITPYAQLELEFK
CHANPKKDLTAIYRRRSKQMPPLAYEVKHHPGSVNNLLIQQLIHRQACTN
LLAFLTKELSSIEKSLAGRIITELGTGFDPKMRPSDLTVKDVARLAQMLK
DVKRFKPPDGACLSPAGEYNLR*
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mRNA from alignment at H-paniculata_contig2006:7735..12986-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2006.5160.1 ID=mRNA_H-paniculata_contig2006.5160.1|Name=mRNA_H-paniculata_contig2006.5160.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5252bp|location=Sequence derived from alignment at H-paniculata_contig2006:7735..12986- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTGGGTGTGTCTACAGGCGAGGTGCTGAAGTCCAAGTCTCCAGCCGAGTT TTTTGCGGATAACCAAAACATCGCTGGTTTTGACAATGTGAGAAAGAGCA GTTGAACTATTGTATATTCATCCAAAATGATCCTCTTCATCAACACGTTT CCCGTCTGCCACCGCGGTTTGCGGCTTCGGGATCCACCTGCAATCGCTTA GACATGGAGAGCGTTGTTCTGGTTCGTTATGTATAGATTCTGAATCAAGG CGACTTCTCAGATTGTGCGTGATTTGTTAACGTATGTGTAGCGAAGGGTT TGGAGTACAGTAGAACAGCAGAACAGCAGCCTGTGTCTCATCAATTCAAT GCGACAACTGCCTTGACTAAAAGTTGAGACCTGTGCTGAGCGGCACGCGA AGAATATCATGAAGGAAACACCGCGTCGTCGCCCCCGTCGCTGTATTAGG CCGGCAAGTCCCTGTACACAACAATTCGAGAACTGGTGGAGAACAGCTTA GATGCCGCGGAGTCTATTGGCGTGCTACCCCTGGTTTCTCTCAGCGTGGA GGAGTTCACAGAGGCGGAGTTCAATCAGTATCGAGGGATGGAGAACAGAG ATGTCGTGGACACGGGTCTATTCAAGGTATCGAAGAGTCCATTCCAGTCC AGGACAGCATACTACAGTGGCATTCACCAAGCCACGACTTCAGCCCAATT GTTGTGAAAAATATGACGAAGACAAGTGTTGCCACGAGCAAGCTATATTT TGTGATGTGATGATTTTTTCGTACGTCGGTTGTTTTCCCACAACAGAATA CGTCCCAAAGTACACATTCGAATGTATGCGATGAATTCTCTTTGTGGGAA AAGATCTGCTTTCAAGCTTCGATTCTCTCTGCCTGTGATTCTTGGAGTCC GTGAACACTGTCTAAGCGTGCATGAGACAATAGAACGCTTTCCATTTGGG CACTGCTCAAGAACTCTCTTCAAGCTCCGAGCTCCTTCCTAGCCATACGT GATATATTGGTGTCATGCATAAAGTAGGAAACACGTACAACCTCGATTCC GCCAGTGCATCACCTGTTCCATTTATTATGTGCAATCAGCACGTTGGAGA CTTGGAAAAAAATAAGTTGCGGTGTCATATCTTCATATTCCTATGGCAGG AATGTAGTCTACAACTTACTCTATGACTCGTTCGATGGTCACGTGAACGA AAGACAAATAGACGGGTCGGTTTCGACTCCGACGAGCGGGCTAGTTGCTC CTTAATTTCTTGATTTACTCCTGGTCATTTTTTATGTTTTGGCCACAGCA GCATCTCGTATACTTGATACGCCATGATGCAAAGCGTGTGCTCTCCTGAT ACGCAGACAACGGGAGGACGGAAGGCATCGGCGAAGAACCTCAAAGCGGT CCCTGCGTCAGCAGAAGGAGGTGAGGACGTAGCAGCAGAGGACCCAAGCA GGGACGGGGCGAAAGCAGGTGCAGGGCCTGACGAAGACGCTGTTGCCACT GCGGTGGCAACGGTGGCTGCTAAAGAAAAGAAAGGCCGCTCCAAGGGCGA TTCTCTCTACTATCGGGTCAAGTGCAGGGACAACGGAGTGGGCATGCCTC ACGCCAAGGTAACATGACTCTAATATGTTTATTTCGAGCGTACTTGTGGT GGTGTAGACAACTTGTGCAGTATACGGTATCTAGTTTCTTTCGAATTCAG TGCGTGAGCACATGGAAGCATGGGGTATAATTTTTTGTATGGTGACTTGA TACTACTGTTGTTTTTTTTCACCGTGATTGAATGGAGCTGCTGAGATCGG CGGCGGACATGATCGTTCGGCGAACCGATCATGGAGTTAATGTTCCGACT TTTGATTTAACTCTCATAATTACAGATTCCGGATATGCTCGGTGTCGTGC TATCTAGCAGTAAGTACGGCGTGCGCCAGGCACGTGGGAAGTACGGCATG GGCGCCAAGATGGCGCTCATTTGGTCCAAGAAAAGCACGGGGTTGCCGAT ACAGGTGACTGCATCATAAAATAAATCCAAAGAGACATGATAGGACAAAA CGATCCCTGAAGGCAGAGCGCGATGGAGGACTCGTTGGAAGCATTCTCTT GGGGAGTACTGTTTGGCGTTTCGTACTATCTCAATCTTGGCATTTTGGAG GCCTTTTCTTCGCGTCTATATCTTGCAAAGTAAACGGTTGCACCCATGCC GTCTGTTCTTGTTCCGATGAACTCGTCGTCGGCGTTTTCAGTTGGACGTT TCGTGTTTATGCGCTATTTGTGCACTCGTATTTTTTTTCGTCTCGCAGGT TCGATCCGGTTGTAGCAATGACCCAGACGAAGCCCCAGACTTTGTGACGA AGTGTGTCCTAGACATAGACATCTACAAGAACAGGCCATCTGTCCACGAG CACGTCAAGCTGTCCAACCCAGAGGTTTGTTGTCGGCCTCGTGTAGCGTT TTATTTTTATCTGTGCCTGTTTGTTGTTATTGTTGTAATGTGCGATTTTG CCTCGGAATTATCGCCGTGCGGCCACCGCGCTGTCAGGTATACTCCGATC GTCCCCTCGTGAGACCGTTTGTGCAAAAGGGTTGTCCTAAATACCTCGCA TCTCTCCCTGACCAAAAAGCGTGTCAACCTCAACCGACCTCTCGTTCTGG ATGGACGGACGCATCGGTCCTTTTGTGTCATCCCGGCCGCTACGTTGCTG CGATTGTTGCCGGAACGCCTTCAGGGCTGGCGAGGAACGGAGCTGATGGT GTGCGTAAGCGGGAACTGGCCAACCTACAAGTCCAGGGTGCTTCAGGTCT GGCGTATGATATTGTAAATAAGTTTGAGCCTTCAGGAACCGGACTTCGTA ACGGCCAATATATATATATTTGCCAAGGACCAGTCGTGGATAATGACGAA TGCATCGACATAATGCCTAAGCAGCTCTTGACAGCTGGTTAGTGCATCTC AGGTGCAAAGGGGGGTCGTTTGTTTGTCGTTTGATATGTTTTTTCATCTT GTACTCAATGTATAACTAGAACGAGCAAACCCTTTCTTTTTTTCGAGACG ACCAAATGATAAACAAGCATCCCACATGACTAGTTGATTAGAAGGTCAGA AGTTCATAACGGATTCATGTGCAGGTTGTTGCAGCAGACGAGAAAGTAGG CAAGGGACATGGCAATATCAAAAGTCTTGTGATCATCGAGGTAGTGATGC TTTGTTATGTACCGTATTAACCCTGACAGTGCCCGGCCGTGTACGATGCT AGATAAACAGGCCAAAGCCCCTCGTTTATGACAAACGTCCACGACACGAT TATGGGGATAGGGAGCTCTTCGGGCAATACATACGGTCCTATAGTTACTA TTTTACACACACAGACACAGGTTACAACGGTTGGCATGGTTTCGAGTTCG ACGACAGCAGCGCATGATTGAAACGCGAAGCACAAACCACATCATGAGTG ACAATACAGGGTGTGTGTGTATGCTGCAGGAAGCCGCACCTCAGGACATT TGATCAAAAACACCGCACCATGGGTCTAAGGGCATTTCTCCGATACCCGC AGACAGTGCAGCCAGCAAAATGCAGAAATATTTGTGGCACAACGGCAGAT CGGCCGTAGCCACAGTGGCAAGGTACAGTCTTGCCATCCCTCTCTTACTG GTACTCGCTGTCGATACTATGCGTCTGTTGAGCCCACGAAGGACAACCAG ACCAAAAGGGCGCCACCCAAACAACCATAGCGACCTACAAATGAAGTAAA CAAACGTGGATGTTTTTCTCATACCCATTCAACCGCTCCGAGGGATCCTG TCACCCAAAATGACTTGAGTATTGTATGGGAGACGACACGTGTATGATTG ACCTGACTCTATGTTTTTCGTGTTCAATCTTCTGTCATGTCCCATGCTAT GGAGTCGGAAGCTTACCCCCCCATCTAAAAAGGACCCCCCCCCCTTTCGC GGCGTTTTCGACGCCGGATGGTCAAGTGCCTTTATCGTTCTATTTTTGTC CGGTTGCCATAGGGATTAAATTGCATGTAGCTGCTGCTGATTAAAGCCGG CAGCAGACTATGAACTTGTGATGGTTGTTATTGGATCAAGGCGCAAAGGA GTGATTGGCTTAGCCATGGTTAAATCGTTACATCTTTATACGCTGATAGC GGGACGTATATGTCATCATGGGTTTCAACCGTTGTCGTAATATACCGTTT AACAGACCGTTGTGCGCGACAGCGTGCAAATCAGTGCACTACCGATAAAC ATGGACAACATGCGTGTCGCTTCTTTTACATTTTTTGTTCATGGATCCCC CCCTACAGTACTTGCAACAACTGGCGATCATCACGCCTTACGCGCAGCTG GAGCTGGAGTTCAAATGCCATGCCAACCCGAAGAAGGACCTAACAGCTAT TTACCGCAGGCGGTCTAAGCAAATGCCTCCTCTCGCTTACGAAGTGAAGC ATCACCCGGGCAGCGTGAACAACCTCCTCATTCAACAACTCATCCATAGG CAAGCCGTACGTCATAAGTGGCAGAACGGAGAAGAGGTGACTTGGTTTGT TTTCGTCGCATGCTGACGCTTGAATAGGCCCATTTGGCTACTTTGCAGCT TGTGAGGCAATTATCTCGCGAACTGATGTTCTCTTGCTCTGGGCGTGCTC ATTTCGTTTGTCCTCTCCCTTTGCACCCTTGATTCGTGTCACCGTTTGCA GGACGAAGTGCACCAATCTTTTGGCGTTCCTGACAAAGGAGCTGTCTTCC ATTGAGAAGTGAGCTATTCTTTCTTTTTCACAATATTGCAACGTATGCAT GCCTTCATGTTGTTTTGCGTTGCTCGTCGCTACAGATTTAGGTCCGTCGT CCTCCGGTAAGCAGCATACTCTAGATTCATTTTGGTGCCTGCCAATTGTA TTGCACACCACATTTTTCGGTGTCATGGAGTGAGAATACTCATCGGCAGC AACGCCAGACACATGGTTGTACTCTTTTTGAACTCCAAGTCAGGTGTGTG GGCTTGGCGCTCCTATTTACTGCTATACACTTTAACGCGCTCGAACTCAC TATCCACTCCGTTGCCATTGATAGGTCACTGGCCGGACGCATCATCACGG AGTTGGGAACAGGTTTTGATCCCAAGATGCGGCCATCCGACCTTACGGTG AAGGACGTGGCTCGCCTCGCGCAAATGCTCAAGGATGTCAAGCGCTTCAA GCCCCCAGACGGGGCCTGCCTTAGCCCGGCAGGGGAGTACAACCTCAGGT GA
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Coding sequence (CDS) from alignment at H-paniculata_contig2006:7735..12986-

>mRNA_H-paniculata_contig2006.5160.1 ID=mRNA_H-paniculata_contig2006.5160.1|Name=mRNA_H-paniculata_contig2006.5160.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2538bp|location=Sequence derived from alignment at H-paniculata_contig2006:7735..12986- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTGGGTGTGTCTACAGGCGAGGTGCTGAAGTCCAAGTCTCCAGCCGAGTT
TTTTGCGGATAACCAAAACATCGCTGGTTTTGACAATCTGGGTGTGTCTA
CAGGCGAGGTGCTGAAGTCCAAGTCTCCAGCCGAGTTTTTTGCGGATAAC
CAAAACATCGCTGGTTTTGACAATGCCGGCAAGTCCCTGTACACAACAAT
TCGAGAACTGGTGGAGAACAGCTTAGATGCCGCGGAGTCTATTGGCGTGC
TACCCCTGGTTTCTCTCAGCGTGGAGGAGTTCACAGAGGCGGAGTTCAAT
CAGTATCGAGGGATGGAGAACAGAGATGTCGTGGACACGGGTCTATTCAA
GGCCGGCAAGTCCCTGTACACAACAATTCGAGAACTGGTGGAGAACAGCT
TAGATGCCGCGGAGTCTATTGGCGTGCTACCCCTGGTTTCTCTCAGCGTG
GAGGAGTTCACAGAGGCGGAGTTCAATCAGTATCGAGGGATGGAGAACAG
AGATGTCGTGGACACGGGTCTATTCAAGACAACGGGAGGACGGAAGGCAT
CGGCGAAGAACCTCAAAGCGGTCCCTGCGTCAGCAGAAGGAGGTGAGGAC
GTAGCAGCAGAGGACCCAAGCAGGGACGGGGCGAAAGCAGGTGCAGGGCC
TGACGAAGACGCTGTTGCCACTGCGGTGGCAACGGTGGCTGCTAAAGAAA
AGAAAGGCCGCTCCAAGGGCGATTCTCTCTACTATCGGGTCAAGTGCAGG
GACAACGGAGTGGGCATGCCTCACGCCAAGACAACGGGAGGACGGAAGGC
ATCGGCGAAGAACCTCAAAGCGGTCCCTGCGTCAGCAGAAGGAGGTGAGG
ACGTAGCAGCAGAGGACCCAAGCAGGGACGGGGCGAAAGCAGGTGCAGGG
CCTGACGAAGACGCTGTTGCCACTGCGGTGGCAACGGTGGCTGCTAAAGA
AAAGAAAGGCCGCTCCAAGGGCGATTCTCTCTACTATCGGGTCAAGTGCA
GGGACAACGGAGTGGGCATGCCTCACGCCAAGATTCCGGATATGCTCGGT
GTCGTGCTATCTAGCAGTAAGTACGGCGTGCGCCAGGCACGTGGGAAGTA
CGGCATGGGCGCCAAGATGGCGCTCATTTGGTCCAAGAAAAGCACGGGGT
TGCCGATACAGATTCCGGATATGCTCGGTGTCGTGCTATCTAGCAGTAAG
TACGGCGTGCGCCAGGCACGTGGGAAGTACGGCATGGGCGCCAAGATGGC
GCTCATTTGGTCCAAGAAAAGCACGGGGTTGCCGATACAGGTTCGATCCG
GTTGTAGCAATGACCCAGACGAAGCCCCAGACTTTGTGACGAAGTGTGTC
CTAGACATAGACATCTACAAGAACAGGCCATCTGTCCACGAGCACGTCAA
GCTGTCCAACCCAGAGGTTCGATCCGGTTGTAGCAATGACCCAGACGAAG
CCCCAGACTTTGTGACGAAGTGTGTCCTAGACATAGACATCTACAAGAAC
AGGCCATCTGTCCACGAGCACGTCAAGCTGTCCAACCCAGAGGGCTGGCG
AGGAACGGAGCTGATGGTGTGCGTAAGCGGGAACTGGCCAACCTACAAGT
CCAGGGTGCTTCAGGGCTGGCGAGGAACGGAGCTGATGGTGTGCGTAAGC
GGGAACTGGCCAACCTACAAGTCCAGGGTGCTTCAGTACTTGCAACAACT
GGCGATCATCACGCCTTACGCGCAGCTGGAGCTGGAGTTCAAATGCCATG
CCAACCCGAAGAAGGACCTAACAGCTATTTACCGCAGGCGGTCTAAGCAA
ATGCCTCCTCTCGCTTACGAAGTGAAGCATCACCCGGGCAGCGTGAACAA
CCTCCTCATTCAACAACTCATCCATAGGCAAGCCTACTTGCAACAACTGG
CGATCATCACGCCTTACGCGCAGCTGGAGCTGGAGTTCAAATGCCATGCC
AACCCGAAGAAGGACCTAACAGCTATTTACCGCAGGCGGTCTAAGCAAAT
GCCTCCTCTCGCTTACGAAGTGAAGCATCACCCGGGCAGCGTGAACAACC
TCCTCATTCAACAACTCATCCATAGGCAAGCCTGCACCAATCTTTTGGCG
TTCCTGACAAAGGAGCTGTCTTCCATTGAGAATGCACCAATCTTTTGGCG
TTCCTGACAAAGGAGCTGTCTTCCATTGAGAAGTCACTGGCCGGACGCAT
CATCACGGAGTTGGGAACAGGTTTTGATCCCAAGATGCGGCCATCCGACC
TTACGGTGAAGGACGTGGCTCGCCTCGCGCAAATGCTCAAGGATGTCAAG
CGCTTCAAGCCCCCAGACGGGGCCTGCCTTAGCCCGGCAGGGGAGTACAA
CCTCAGGTGAGTCACTGGCCGGACGCATCATCACGGAGTTGGGAACAGGT
TTTGATCCCAAGATGCGGCCATCCGACCTTACGGTGAAGGACGTGGCTCG
CCTCGCGCAAATGCTCAAGGATGTCAAGCGCTTCAAGCCCCCAGACGGGG
CCTGCCTTAGCCCGGCAGGGGAGTACAACCTCAGGTGA
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