prot_H-paniculata_contig2004.5152.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig2004.5152.1
Unique Name	prot_H-paniculata_contig2004.5152.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	186

Homology

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BLAST of mRNA_H-paniculata_contig2004.5152.1 vs. uniprot
Match: D7FKV0_ECTSI (Ferredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKV0_ECTSI)

HSP 1 Score: 193 bits (491), Expect = 5.430e-60
Identity = 102/161 (63.35%), Postives = 120/161 (74.53%), Query Frame = 0

Query:   25 SGFLFSFPANTLSNAATGTNRKTSTPPELRAYDMLVTMPDGGEQRIVSANEGQSILEALEMDGIEAPHSCRSGLCTECAAMVTANLDKVKLEAAVLEPEVSARGFVLTCSSTIAGSGVELELGAGDKMYEAQYGGFRKDHEEAQTSKPGKWSIPFPDISGA 185
            SGF+F  PA      +T    + S+ P   A D+ VT+   G  R V+  EG SIL+ LE   I+APHSCRSGLCTECAAMVTANLD VKLEAAVL+PE+SARGFVLTCSST+AG GVELELG GDKMYEAQYG   + H +AQ +KPGKW++PFPD+SGA
Sbjct:   18 SGFVFPAPA-----VSTCRRARMSSSPLRAANDVKVTVE--GVVRTVALEEGVSILDGLEAHDIDAPHSCRSGLCTECAAMVTANLDNVKLEAAVLDPEISARGFVLTCSSTVAGPGVELELGVGDKMYEAQYGELVQGHNDAQEAKPGKWNLPFPDVSGA 171

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BLAST of mRNA_H-paniculata_contig2004.5152.1 vs. uniprot
Match: A0A7S1NQA7_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NQA7_9EUGL)

HSP 1 Score: 113 bits (282), Expect = 3.300e-29
Identity = 48/96 (50.00%), Postives = 72/96 (75.00%), Query Frame = 0

Query:   75 EGQSILEALEMDGIEAPHSCRSGLCTECAAMVTANLDKVKLEAAVLEPEVSARGFVLTCSSTIAGSGVELELGAGDKMYEAQYGGFRKDHEEAQTS 170
            + +++L+A+E  GI+APHSCR+GLCTECA  VT+ LD + L+A V +      G+VLTC++ + G GVE+ LG GD+MY++Q+G FRK HE+ Q++
Sbjct:    8 KSETLLDAMEAAGIDAPHSCRTGLCTECAGRVTSGLDSIDLQACVTQDSTFNEGYVLTCAANVTGPGVEITLGMGDEMYDSQFGDFRKGHEDMQSA 103

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BLAST of mRNA_H-paniculata_contig2004.5152.1 vs. uniprot
Match: A0A7S2XX00_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX00_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.540e-17
Identity = 43/111 (38.74%), Postives = 67/111 (60.36%), Query Frame = 0

Query:   56 YDMLVTMPDGGEQRIVSANEGQSILEALEMDGIEAPHSCRSGLCTECAAMVTANLDKVKLEAAVLEPEVSARGFVLTCSSTIAGSGVELELGAGDKMYEAQYGGFRKDHEE 166
            +D+ +T    GE ++++  E Q+ILEA E    + P SCR+G+CT CAAMVT   + + L    L  E   +G+ L C S   G G+++ELG  D++YE QYG + ++ +E
Sbjct:   23 WDVSITF--NGETKVITVPEDQNILEASEELFGDVPCSCRNGICTTCAAMVTGGEESLTLAVHGLSAEQREKGYTLCCQSYATGPGLKVELGKYDEVYEDQYGKYERNQQE 131

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BLAST of mRNA_H-paniculata_contig2004.5152.1 vs. uniprot
Match: A0A4Y3G2Y9_9CYAN (Ferredoxin n=1 Tax=cyanobiont of Ornithocercus magnificus TaxID=2496102 RepID=A0A4Y3G2Y9_9CYAN)

HSP 1 Score: 62.4 bits (150), Expect = 1.970e-9
Identity = 38/99 (38.38%), Postives = 59/99 (59.60%), Query Frame = 0

Query:   66 GEQRIVSANEGQSILEALEMDGIEAPHSCRSGLCTECAAMVTANLDKVKLEAAVLEPEVSARGFVLTCSSTIAGSGVELELGAG--DKMYEAQYGGFRK 162
            GE+        Q+I +A E  G+  P SCRSG+CT CAA+V+  + + + +A  ++PE+  +GF L C   +A    +L L AG  D +YEAQ+G ++K
Sbjct:   17 GEKSSFQCRSDQTIQQAAENAGVMLPSSCRSGVCTTCAALVSDGIVE-QPDAMGVKPELQEQGFTLLC---VAYPRSDLSLCAGQEDILYEAQFGQYQK 111

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BLAST of mRNA_H-paniculata_contig2004.5152.1 vs. uniprot
Match: A0A519S6Q1_9BACT (Phenylacetate-CoA oxygenase/reductase subunit PaaK n=2 Tax=Hymenobacter TaxID=89966 RepID=A0A519S6Q1_9BACT)

HSP 1 Score: 61.6 bits (148), Expect = 6.610e-8
Identity = 33/78 (42.31%), Postives = 52/78 (66.67%), Query Frame = 0

Query:   59 LVTMP-DGGEQRIVSANEGQSILEALEMDGIEAPHSCRSGLCTECAAMVTANLDKVKLEAAVLEPEVSARGFVLTCSS 135
            LVT+  DGG + +  +  G +IL+A    GI+AP+SC++G+C+ C A VTA   ++ +  ++ E EV ARG+VLTC +
Sbjct:  270 LVTLKLDGGARLLEMSYYGNTILDAALESGIDAPYSCKNGMCSTCMARVTAGRVEMDVNYSLSEAEV-ARGYVLTCQA 346

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BLAST of mRNA_H-paniculata_contig2004.5152.1 vs. uniprot
Match: A0A4Q5RCF9_9BACT (Phenylacetate-CoA oxygenase/reductase subunit PaaK n=1 Tax=Cytophagaceae bacterium TaxID=2026729 RepID=A0A4Q5RCF9_9BACT)

HSP 1 Score: 61.2 bits (147), Expect = 8.990e-8
Identity = 29/72 (40.28%), Postives = 49/72 (68.06%), Query Frame = 0

Query:   64 DGGEQRIVSANEGQSILEALEMDGIEAPHSCRSGLCTECAAMVTANLDKVKLEAAVLEPEVSARGFVLTCSS 135
            DGG +++  +  G +IL+A    GI+AP+SC++G+C+ C A VTA   ++ +  ++ E EV A+G+VLTC +
Sbjct:  276 DGGTRQLAMSYYGNTILDAALESGIDAPYSCKNGMCSTCLARVTAGRVEMDVNYSLSEAEV-AKGYVLTCQA 346

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BLAST of mRNA_H-paniculata_contig2004.5152.1 vs. uniprot
Match: Q3AZL8_SYNS9 (Ferredoxin (2Fe-2S) n=2 Tax=unclassified Synechococcus TaxID=2626047 RepID=Q3AZL8_SYNS9)

HSP 1 Score: 56.6 bits (135), Expect = 3.140e-7
Identity = 33/98 (33.67%), Postives = 56/98 (57.14%), Query Frame = 0

Query:   66 GEQRIVSANEGQSILEALEMDGIEAPHSCRSGLCTECAAMVTA-NLDKVKLEAAVLEPEVSARGFVLTCSSTIAGSGVELELGAGDKMYEAQYGGFRK 162
            GE         Q++L A E  GI  P SC +G+CT CAA+++A ++D+   +A  +  ++  +G+ L C S    + + L+ G  D +YEAQ+G ++K
Sbjct:   19 GEVHQFKCRADQTVLNAAEAAGINLPSSCCTGVCTTCAAVISAGSVDQP--DAMGVRSDLQEKGYALLCVS-FPRADLTLKTGQEDALYEAQFGQYQK 113

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BLAST of mRNA_H-paniculata_contig2004.5152.1 vs. uniprot
Match: A0A1Z8QU81_9BACT (Uncharacterized protein n=1 Tax=Bacteroidetes bacterium TMED39 TaxID=1986664 RepID=A0A1Z8QU81_9BACT)

HSP 1 Score: 58.9 bits (141), Expect = 5.590e-7
Identity = 29/70 (41.43%), Postives = 44/70 (62.86%), Query Frame = 0

Query:   66 GEQRIVSANEGQSILEALEMDGIEAPHSCRSGLCTECAAMVTANLDKVKLEAAVLEPEVSARGFVLTCSS 135
            G++ IV+  EGQ+ILEA++   ++ P+SC +G+CT C A V A   K+     + + E+   GFVLTC S
Sbjct:  273 GDESIVTVEEGQTILEAVQDADLDPPYSCTAGVCTTCRARVIAGSVKMDEREGLSDAEIE-EGFVLTCQS 341

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BLAST of mRNA_H-paniculata_contig2004.5152.1 vs. uniprot
Match: UPI0018DAF629 (phenylacetate-CoA oxygenase/reductase subunit PaaK n=5 Tax=Hymenobacter TaxID=89966 RepID=UPI0018DAF629)

HSP 1 Score: 58.9 bits (141), Expect = 5.660e-7
Identity = 34/100 (34.00%), Postives = 56/100 (56.00%), Query Frame = 0

Query:   38 NAATGTNRKTSTPP--ELRAYDMLVTMPDGGEQRIVSANEGQSILEALEMDGIEAPHSCRSGLCTECAAMVTANLDKVKLEAAVLEPEVSARGFVLTCSS 135
            NA  G   K   PP  E   +  +    DG  + +  +  G +IL+AL   G++AP+SC++G+C+ C A VTA   ++ +  ++ + EV A G+VLTC +
Sbjct:  248 NAGAGGAAKPKLPPVGEDDKHSTVTVQLDGNTRVLEMSYYGNTILDALLETGVDAPYSCKNGMCSTCRARVTAGQVEMDVNYSLSDTEV-ANGYVLTCQA 346

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BLAST of mRNA_H-paniculata_contig2004.5152.1 vs. uniprot
Match: A0A519ZD81_9BACT (2Fe-2S iron-sulfur cluster binding domain-containing protein (Fragment) n=1 Tax=Hymenobacter sp. TaxID=1898978 RepID=A0A519ZD81_9BACT)

HSP 1 Score: 55.8 bits (133), Expect = 8.930e-7
Identity = 29/85 (34.12%), Postives = 50/85 (58.82%), Query Frame = 0

Query:   64 DGGEQRIVSANEGQSILEALEMDGIEAPHSCRSGLCTECAAMVTANLDKVKLEAAVLEPEVSARGFVLTCSSTIAGSGVELELGA 148
            DG   R+  +  G ++L+A    GI+AP+SC++G+C+ C A VT     + +  ++ E EV A+G+VLTC +    + V ++  A
Sbjct:   48 DGRGYRLDMSYYGDTVLDAALAAGIDAPYSCKNGMCSTCRARVTGGTAAMDVNYSLSETEV-AKGYVLTCQARPTTAEVTIDFDA 131

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig2004.5152.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig2004.5152.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FKV0_ECTSI	5.430e-60	63.35	Ferredoxin n=1 Tax=Ectocarpus siliculosus TaxID=28...	[more]
A0A7S1NQA7_9EUGL	3.300e-29	50.00	Hypothetical protein (Fragment) n=1 Tax=Eutreptiel...	[more]
A0A7S2XX00_9STRA	1.540e-17	38.74	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A4Y3G2Y9_9CYAN	1.970e-9	38.38	Ferredoxin n=1 Tax=cyanobiont of Ornithocercus mag...	[more]
A0A519S6Q1_9BACT	6.610e-8	42.31	Phenylacetate-CoA oxygenase/reductase subunit PaaK...	[more]
A0A4Q5RCF9_9BACT	8.990e-8	40.28	Phenylacetate-CoA oxygenase/reductase subunit PaaK...	[more]
Q3AZL8_SYNS9	3.140e-7	33.67	Ferredoxin (2Fe-2S) n=2 Tax=unclassified Synechoco...	[more]
A0A1Z8QU81_9BACT	5.590e-7	41.43	Uncharacterized protein n=1 Tax=Bacteroidetes bact...	[more]
UPI0018DAF629	5.660e-7	34.00	phenylacetate-CoA oxygenase/reductase subunit PaaK...	[more]
A0A519ZD81_9BACT	8.930e-7	34.12	2Fe-2S iron-sulfur cluster binding domain-containi...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 36..152 e-value: 1.7E-16 score: 62.0
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 66..136 e-value: 4.4E-10 score: 39.4
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 56..150 score: 10.977
None	No IPR available	PANTHER	PTHR43112	FAMILY NOT NAMED	coord: 51..136
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 40..185
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..5
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 6..21
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 22..39
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..39
None	No IPR available	TMHMM	TMhelix		coord: 7..29
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 58..146

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig2004	contig	H-paniculata_contig2004:935..2382 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig2004.5152.1	mRNA_H-paniculata_contig2004.5152.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig2004 155..2441 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig2004.5152.1 ID=prot_H-paniculata_contig2004.5152.1|Name=mRNA_H-paniculata_contig2004.5152.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=186bp
MKAPRAVAALVVITISLSFIIQSSSGFLFSFPANTLSNAATGTNRKTSTP
PELRAYDMLVTMPDGGEQRIVSANEGQSILEALEMDGIEAPHSCRSGLCT
ECAAMVTANLDKVKLEAAVLEPEVSARGFVLTCSSTIAGSGVELELGAGD
KMYEAQYGGFRKDHEEAQTSKPGKWSIPFPDISGA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012675	Beta-grasp_dom_sf
IPR001041	2Fe-2S_ferredoxin-type
IPR036010	2Fe-2S_ferredoxin-like_sf