prot_H-paniculata_contig20025.5146.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig20025.5146.1
Unique Name	prot_H-paniculata_contig20025.5146.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	327

Homology

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BLAST of mRNA_H-paniculata_contig20025.5146.1 vs. uniprot
Match: A0A6H5JK35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK35_9PHAE)

HSP 1 Score: 224 bits (571), Expect = 2.300e-65
Identity = 142/269 (52.79%), Postives = 174/269 (64.68%), Query Frame = 0

Query:   66 EFDVHALLENMPQPRALSS-KGNRSSGS----FRSGGSAAVAAGVGSAQGVGVGLNVDAWVQFASLRGFERALEAFRGRVLKKEGAELLCEYRLGADVTGYMTEERRREREEAXXXXXXXXXXXXASIEQARGGLVSLRNGLQGLVAMVMADDRPAVTALVEPIMKKVTGHVDKAEGLFGVFN--IDEGAATAAVSHAKGEIAIARLSIRKAREAVNRDEEEDRKRLEAEHDKCLRDKARLALVQLEEMLSRGLTLIEGNREHPGIKAQ 327
            +FDV+ALLENMP+PRAL+  KG  S GS                           +VDAWVQFAS  GF+ ALEA R + L+K GAEL+CEYRLG D +G+MTE++RRER  A            ASIE+ARG L  LR GLQGL   V  D RPA+    +P ++KVTGHV+ AE L GV    +DE AATAAV+HA+GE+AIARLS+RKA+ AV+R EEE+R R+E E D+ LRD AR  LVQL E LS+GL L+   R+H GIK Q
Sbjct:  273 DFDVNALLENMPKPRALAKDKGGASKGSGSRPXXXXXXXXXXXXXXXXXXXXXXXHVDAWVQFASFWGFQGALEALRAKTLQKAGAELVCEYRLGVDASGFMTEDQRRERVIARAEKAREEERRKASIEKARGQLALLREGLQGLRDAVAEDGRPALEDATKPTLQKVTGHVEGAEELLGVREALVDEPAATAAVAHARGEVAIARLSVRKAKAAVDRAEEEERIRIEREKDRGLRDAARATLVQLRESLSQGLALVAAERQHRGIKPQ 541

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BLAST of mRNA_H-paniculata_contig20025.5146.1 vs. uniprot
Match: D8LP18_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP18_ECTSI)

HSP 1 Score: 232 bits (592), Expect = 3.180e-65
Identity = 146/280 (52.14%), Postives = 179/280 (63.93%), Query Frame = 0

Query:   66 EFDVHALLENMPQPRALSS-KGNRSSGS---------------FRSGGSAAVAAGVGSAQGVGVGLNVDAWVQFASLRGFERALEAFRGRVLKKEGAELLCEYRLGADVTGYMTEERRREREEAXXXXXXXXXXXXASIEQARGGLVSLRNGLQGLVAMVMADDRPAVTALVEPIMKKVTGHVDKAEGLFGVFN--IDEGAATAAVSHAKGEIAIARLSIRKAREAVNRDEEEDRKRLEAEHDKCLRDKARLALVQLEEMLSRGLTLIEGNREHPGIKAQ 327
            +FDV+ALLENMP+PRAL+  KG  S GS                  GG             + VGL+VDAWVQFAS  GF+ ALEA R + L+K GAEL+CEYRLG D +G+MTE++RRER  A            ASIE+ARG L  LR GLQGL   V  D RPA+    +P ++KVTGHV+ AE L GV    +DE AATAAV+HA+GE+AIARLS+RKA+ A +R EEE+R R+E E D+ LRD AR  LVQL E LS+GL L+   R+H GIK Q
Sbjct:  276 DFDVNALLENMPKPRALAKDKGGGSKGSGSRPXXXXXXXXXXXXXLGGDI-----------LSVGLHVDAWVQFASFLGFQGALEALRAKTLQKAGAELVCEYRLGVDASGFMTEDQRRERVIARAEKAREEDRRKASIEKARGQLALLREGLQGLRDAVAEDGRPALEDATKPTLQKVTGHVEGAEALLGVREALVDEPAATAAVAHARGEVAIARLSVRKAKAAADRAEEEERIRIEREKDRGLRDAARATLVQLRESLSQGLALVAAERQHRGIKPQ 544

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig20025.5146.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig20025.5146.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JK35_9PHAE	2.300e-65	52.79	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LP18_ECTSI	3.180e-65	52.14	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 260..295
None	No IPR available	PANTHER	PTHR12484	B-LYMPHOCYTE ANTIGEN-RELATED	coord: 111..186

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig20025	contig	H-paniculata_contig20025:1458..4577 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig20025.5146.1	mRNA_H-paniculata_contig20025.5146.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig20025 1458..4592 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig20025.5146.1 ID=prot_H-paniculata_contig20025.5146.1|Name=mRNA_H-paniculata_contig20025.5146.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=327bp
MSRVGAVRAVEVAPSAPRSRVEDLSPGGLPSSTTTAASSPSAGAGRSGAA
GAASPSLSSSFLGHKEFDVHALLENMPQPRALSSKGNRSSGSFRSGGSAA
VAAGVGSAQGVGVGLNVDAWVQFASLRGFERALEAFRGRVLKKEGAELLC
EYRLGADVTGYMTEERRREREEARERETKEAERRRASIEQARGGLVSLRN
GLQGLVAMVMADDRPAVTALVEPIMKKVTGHVDKAEGLFGVFNIDEGAAT
AAVSHAKGEIAIARLSIRKAREAVNRDEEEDRKRLEAEHDKCLRDKARLA
LVQLEEMLSRGLTLIEGNREHPGIKAQ