mRNA_H-paniculata_contig20023.5143.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig20023.5143.1 vs. uniprot
Match: A0A6H5LAU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAU0_9PHAE) HSP 1 Score: 181 bits (459), Expect = 7.320e-54 Identity = 101/181 (55.80%), Postives = 123/181 (67.96%), Query Frame = 1
Query: 1 QFLSSCPTNAFQKAATEGGVSKGFSLYQRGVALVIPMPKLFVIGFGATIAGYGMIAGLEAVHEYRRQKQGCVEVLAGAGACDGAK---------------------VNVMGSGLAIGAFLAVSTNVRYQ--ARAVEQRLFGTLLATKPHISNMASTAVRSANLYFGSLTIVDWLRCVGLQH 474
+FL++CP+NAFQK EGGVSK FS+ +RG AL++PMPKLFVIGFGAT+AGYG+IAGLE + V+AG GA + V V+GSGLA+G FLAV TN+RYQ A AVEQR+F T+LA P +S++ASTAVRSANLY GSLTIVDWLR VG+Q
Sbjct: 123 KFLAACPSNAFQKVVAEGGVSKTFSVAERGAALLVPMPKLFVIGFGATLAGYGLIAGLETFSAWTTAAAAAPPVVAGKGAAKSKRGLKRAQKARAAALAEEAQKPPVPVLGSGLAVGMFLAVWTNLRYQFIAGAVEQRIFDTMLAKNPGLSSLASTAVRSANLYVGSLTIVDWLRYVGVQQ 303
BLAST of mRNA_H-paniculata_contig20023.5143.1 vs. uniprot
Match: D7FZL4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZL4_ECTSI) HSP 1 Score: 177 bits (448), Expect = 6.920e-51 Identity = 100/181 (55.25%), Postives = 122/181 (67.40%), Query Frame = 1
Query: 1 QFLSSCPTNAFQKAATEGGVSKGFSLYQRGVALVIPMPKLFVIGFGATIAGYGMIAGLEAVHEYRRQKQGCVEVLAGAGACDGAK---------------------VNVMGSGLAIGAFLAVSTNVRYQ--ARAVEQRLFGTLLATKPHISNMASTAVRSANLYFGSLTIVDWLRCVGLQH 474
+FL++CP+NAFQK EGGVSK FS+ +RG AL++PMPKLFVIGFGAT+AGYG+IAGLE +R V+ GA + V V+GSGLA+G FLAV TN+RYQ A AVEQR+F T+LA P +S++ASTAVRSANLY GSLTIVD LR VG+QH
Sbjct: 247 KFLAACPSNAFQKVVAEGGVSKTFSVAERGAALLVPMPKLFVIGFGATLAGYGLIAGLETFSAWRTAAAAAPPVVVERGAAKSKRGLKRAQKARAAALAEEAQKPPVPVLGSGLAVGMFLAVWTNLRYQFIAGAVEQRIFDTMLAKNPGLSSLASTAVRSANLYVGSLTIVDGLRYVGVQH 427
BLAST of mRNA_H-paniculata_contig20023.5143.1 vs. uniprot
Match: A0A836CF64_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF64_9STRA) HSP 1 Score: 124 bits (312), Expect = 1.350e-32 Identity = 75/166 (45.18%), Postives = 98/166 (59.04%), Query Frame = 1
Query: 1 QFLSSCPTNAFQKAATEGGVSKGFSLYQRGVALVIPMPKLFVIGFGATIAGYGMIAGLEAVHEYRRQKQGCVEVLAGAGACDGAKVN------VMGSGLAIGAFLAVSTNVRYQ--ARAVEQRLFGTLLATKPHISNMASTAVRSANLYFGSLTIVDWLRCVGLQH 474
+F++SCP+NAFQ+ + +SL QRG AL+ PMP+LFVIGFGA AGYG+ + + + A D V + S LAIGAFLAVS+N+RYQ A +EQR LA+KP +SN S +R+ANLY G+ IVDWLR VG+QH
Sbjct: 64 RFMNSCPSNAFQRVVAP---ATHYSLAQRGAALIKPMPQLFVIGFGACAAGYGLTSLMSHIRL----------------ALDPTMVKNTEDAPIFKSSLAIGAFLAVSSNLRYQIIAGGIEQRFLDVALASKPAVSNACSFVLRTANLYLGASMIVDWLRIVGVQH 210
BLAST of mRNA_H-paniculata_contig20023.5143.1 vs. uniprot
Match: A0A7S3XYV0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYV0_HETAK) HSP 1 Score: 90.5 bits (223), Expect = 7.590e-19 Identity = 62/158 (39.24%), Postives = 84/158 (53.16%), Query Frame = 1
Query: 1 QFLSSCPTNAFQKAATEGGVSKGFSLYQRGVALVIPMPKLFVIGFGATIAGYGMIAGLEAVHEYRRQKQGCVEVLAGAGACDGAKVNVMGSGLAIGAFLAVSTNVRYQ--ARAVEQRLFGTLLATKPHISNMASTAVRSANLYFGSLTIVDWLRCVGL 468
+F SCP NAFQK T G F++ QR LV P+LF++GF A++AG+G GL + E E L G +V V+ L IGA+L VSTNVRYQ A +E+RL G L A + ++ S R+ N + GS +V L+ GL
Sbjct: 145 RFFDSCPGNAFQKV-TPGRAP--FTVAQRCGTLVGAFPQLFLVGFAASVAGFGFTLGLSKLREKLNPASAEEEPLGG----PAKEVQVLKPALVIGAYLGVSTNVRYQLVAGLLEERLLGALFANQQFLNTAGSFIFRTGNTFVGSSQMVMTLKWTGL 295
BLAST of mRNA_H-paniculata_contig20023.5143.1 vs. uniprot
Match: A0A7S1EMP3_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EMP3_HEMAN) HSP 1 Score: 87.8 bits (216), Expect = 7.330e-18 Identity = 62/162 (38.27%), Postives = 86/162 (53.09%), Query Frame = 1
Query: 1 QFLSSCPTNAFQKAATEGGVSKGF---SLYQRGVALVIPMPKLFVIGFGATIAGYGMIAGLEAVHEYRRQKQGCVEVLAGAGACDGAKVNVMGSGLAIGAFLAVSTNVRYQ--ARAVEQRLFGTLLATKPHISNMASTAVRSANLYFGSLTIVDWLRCVGLQ 471
+F +SCP NAFQ V KG S QR + PMP+LF IG A GY A AV ++ K G D + + G+A+GA++A+S+N+RYQ A +EQR+ TLLA + + ST +R+AN Y GS +V +LR +GLQ
Sbjct: 136 KFFNSCPDNAFQT------VLKGMPAPSFVQRCGGIFKPMPELFFIGLVAASGGYLYTACNVAVRKFFNPKS--------QGGADLDALQIGKIGVAVGAYVAISSNLRYQFMAGVLEQRVLDTLLAGQVSLRTAGSTVIRTANTYLGSYLLVAYLRWLGLQ 283
BLAST of mRNA_H-paniculata_contig20023.5143.1 vs. uniprot
Match: L1JDI9_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JDI9_GUITC) HSP 1 Score: 82.8 bits (203), Expect = 4.470e-17 Identity = 65/162 (40.12%), Postives = 84/162 (51.85%), Query Frame = 1
Query: 1 QFLSSCPTNAFQKAATEGGVSKGFS---LYQRGVALVIPMPKLFVIGFGATIAGYGMIAGLEAVHEYRRQKQGCVEVLAGAGACDGAKVNVMGSGLAIGAFLAVSTNVRYQ--ARAVEQRLFGTLLATKPHISNMASTAVRSANLYFGSLTIVDWLRCVGLQ 471
++ SSCP NAFQ V KG + L QR AL PMP+LFV+GF A GY A A+ ++ GA A + +AIGA++AVSTN RYQ A E R+F L A + + + ST VR+AN Y GS IV +LR + LQ
Sbjct: 8 KWFSSCPDNAFQM------VLKGQTPPALAQRVGALFKPMPQLFVVGFIAAAGGYAYTAASVALRKWLDPSS-----TGGASLPPDAIAKIS---VAIGAYVAVSTNWRYQVVAGVFEARMFDVLFAKQIALRSAGSTLVRTANTYLGSYWIVSYLRALDLQ 155
BLAST of mRNA_H-paniculata_contig20023.5143.1 vs. uniprot
Match: A0A388L9G5_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388L9G5_CHABU) HSP 1 Score: 79.7 bits (195), Expect = 1.970e-14 Identity = 58/159 (36.48%), Postives = 86/159 (54.09%), Query Frame = 1
Query: 1 QFLSSCPTNAFQKAATEGGVSKGFSLYQRGVALVIPMPKLFVIGFGATIAGYGMIAGLEAVHEYRRQKQGCVEVLAGAGACDGAKVNVMGSGLAIGAFLAVSTNVRYQARA--VEQRLFGTLLATKPHISNMASTAVRSANLYFGSLTIVDWLRCVGLQ 471
+F +CP NAFQ A ++L QR A+V KLF +G GA++ G GL AV ++ + A D V ++ + +A GA++AVS+N+RYQ A VEQR+ LL + +++S AVR+AN + GSL VD+ VG+Q
Sbjct: 345 KFFYNCPDNAFQVALN----GTTYTLLQRCGAIVRNGAKLFAVGTGASLVGTAATNGLIAVRRI-------LDPSSAASGEDAEDVPILETSVAYGAYMAVSSNLRYQVLAGVVEQRILEPLLHQQKLALSLSSFAVRTANTFLGSLLWVDYAIWVGVQ 492
BLAST of mRNA_H-paniculata_contig20023.5143.1 vs. uniprot
Match: A0A1Q3CIF6_CEPFO (DUF3411 domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3CIF6_CEPFO) HSP 1 Score: 73.2 bits (178), Expect = 3.140e-12 Identity = 55/159 (34.59%), Postives = 82/159 (51.57%), Query Frame = 1
Query: 1 QFLSSCPTNAFQKAATEGGVSKGFSLYQRGVALVIPMPKLFVIGFGATIAGYGMIAGLEAVHEYRRQKQGCVEVLAGAGACDGAKVNVMGSGLAIGAFLAVSTNVRYQARA--VEQRLFGTLLATKPHISNMASTAVRSANLYFGSLTIVDWLRCVGLQ 471
+F SCP NAFQ A + G S +S QR A+V KLF +G +++ G + L + L + A + V ++ + +A GA++AVS+N+RYQ A +EQR+ LL I + AVR+ N Y GSL VD+ R +G+Q
Sbjct: 229 KFFHSCPDNAFQVALS--GTS--YSFLQRIGAIVQNGTKLFAVGTTSSLVGTAVTNALINARK----------ALDKSSAVEAENVPILSTSVAYGAYMAVSSNLRYQVLAGVIEQRILEPLLHQHKLILSAICFAVRTGNTYLGSLLWVDYARLIGIQ 373
BLAST of mRNA_H-paniculata_contig20023.5143.1 vs. uniprot
Match: W7U488_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U488_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 1.050e-10 Identity = 54/166 (32.53%), Postives = 84/166 (50.60%), Query Frame = 1
Query: 19 PTNAFQKAATEGGVSKGFSLYQRGVALVIPMPKLFVIGFGATIAGYGMIAGL----EAVHEYRRQKQGCVEVLAGA-GACDGA-------KVNVMGSGLAIGAFLAVSTNVRYQ--ARAVEQRLFGTLLATKPHISNMASTAVRSANLYFGSLTIVDWLRCVGLQH 474
P N FQ ++ ++L R V + MP LFV+G A++ G+G + L + +H Q ++A A GA + K+ V+ + LA+G FLAVSTNVRYQ + E+R LA ++AS VR+ N + GS ++D+L+ + LQ
Sbjct: 253 PANMFQMVPPG---TRPYALSDRLVCPFLKMPTLFVVGLAASLLGFGTTSILTLLRKQLHSKPTQSSPIAPLIASATGAAEETAQEDVVQKIPVIKTSLAVGVFLAVSTNVRYQLVSGVFEERGIARYLAHNKLADHLASFGVRACNTFVGSGQMIDYLKFLKLQE 415
BLAST of mRNA_H-paniculata_contig20023.5143.1 vs. uniprot
Match: A0A1Y1IGG5_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IGG5_KLENI) HSP 1 Score: 67.0 bits (162), Expect = 4.230e-10 Identity = 50/159 (31.45%), Postives = 76/159 (47.80%), Query Frame = 1
Query: 1 QFLSSCPTNAFQKAATEGGVSKGFSLYQRGVALVIPMPKLFVIGFGATIAGYGMIAGLEAVHEYRRQKQGCVEVLAGAGACDGAKVNVMGSGLAIGAFLAVSTNVRYQ--ARAVEQRLFGTLLATKPHISNMASTAVRSANLYFGSLTIVDWLRCVGLQ 471
+F CP NAFQKA + FSL R +++ KLF +G GA++ G L + + + V+ + +A GA++A+S+N+RYQ A VEQR+ L ++S VR+ N + GSL VD+ R VG+Q
Sbjct: 200 RFFFKCPDNAFQKALP----GQDFSLLLRAGSILRNGAKLFGVGTGASLIGTLATNSLSKIRVALNPDY----------VAENEDLPVISTSVAYGAYMAISSNIRYQLLAGVVEQRVLEPFLHKHKLALGVSSFVVRTGNTFLGSLLWVDYARWVGVQ 344 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20023.5143.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig20023.5143.1 >prot_H-paniculata_contig20023.5143.1 ID=prot_H-paniculata_contig20023.5143.1|Name=mRNA_H-paniculata_contig20023.5143.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=159bp QFLSSCPTNAFQKAATEGGVSKGFSLYQRGVALVIPMPKLFVIGFGATIAback to top mRNA from alignment at H-paniculata_contig20023:634..1669- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig20023.5143.1 ID=mRNA_H-paniculata_contig20023.5143.1|Name=mRNA_H-paniculata_contig20023.5143.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1036bp|location=Sequence derived from alignment at H-paniculata_contig20023:634..1669- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig20023:634..1669- >mRNA_H-paniculata_contig20023.5143.1 ID=mRNA_H-paniculata_contig20023.5143.1|Name=mRNA_H-paniculata_contig20023.5143.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=954bp|location=Sequence derived from alignment at H-paniculata_contig20023:634..1669- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |