mRNA_H-paniculata_contig20018.5140.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig20018.5140.1 vs. uniprot
Match: B1N8E7_9PHAE (Glutathione S-transferase 2 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E7_9PHAE) HSP 1 Score: 171 bits (432), Expect = 8.640e-46 Identity = 82/131 (62.60%), Postives = 106/131 (80.92%), Query Frame = 3
Query: 3 AGLYPHDPVEAAFADAAVDSVSDMHHKLIPSIVEKDMAKKLEMRKDLVNNFLSKWLANLEKNLELAGGDYFAGGRLSIGDIAVVARMLWMKEGIPSLDGIPSTLINDYPLLSALVDRVCAEPKIVAYHEAK 395
AGLYP D +EAA ADAAVDSV D H KL P++ +KD +++EMR++LV +FL WL NLEK L AGG YFAGG+LSIGDIAVVAR++W+KEG SLDGIP++++++YPLLSAL++RV AEP I YH+ +
Sbjct: 78 AGLYPEDALEAALADAAVDSVGDNHMKLAPTVQQKDKVQQMEMRQNLVRDFLPTWLGNLEKALANAGGTYFAGGKLSIGDIAVVARLVWLKEG--SLDGIPTSIVDEYPLLSALIERVNAEPNIAKYHQER 206
BLAST of mRNA_H-paniculata_contig20018.5140.1 vs. uniprot
Match: B1N8E6_9PHAE (Glutathione S-transferase 1 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E6_9PHAE) HSP 1 Score: 160 bits (406), Expect = 3.520e-42 Identity = 79/129 (61.24%), Postives = 101/129 (78.29%), Query Frame = 3
Query: 6 GLYPHDPVEAAFADAAVDSVSDMHHKLIPSIVEKDMAKKLEMRKDLVNNFLSKWLANLEKNLELAGGDYFAGGRLSIGDIAVVARMLWMKEGIPSLDGIPSTLINDYPLLSALVDRVCAEPKIVAYHEA 392
GLY DP+EAAFADAA+++V DMH L P++ E+D AKKLEMRK + +N+L WL NLE+ L+ AGG YFAGG+LSIGDI VVAR+ W+K G +LDGIP T+++D+PLLSALV V +E KIV Y E+
Sbjct: 77 GLYSEDPIEAAFADAAMEAVIDMHFHLRPTVHEQDPAKKLEMRKAMTDNYLPTWLGNLERALKAAGGSYFAGGKLSIGDIYVVARLNWLKRG--ALDGIPDTIVDDFPLLSALVQSVMSEEKIVKYLES 203
BLAST of mRNA_H-paniculata_contig20018.5140.1 vs. uniprot
Match: A0A6H5JAZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAZ7_9PHAE) HSP 1 Score: 154 bits (389), Expect = 2.030e-40 Identity = 75/129 (58.14%), Postives = 99/129 (76.74%), Query Frame = 3
Query: 9 LYPHDPVEAAFADAAVDSVSDMHHKLIPSIVEKDMAKKLEMRKDLVNNFLSKWLANLEKNLELAGGDYFAGGRLSIGDIAVVARMLWMKEGIPSLDGIPSTLINDYPLLSALVDRVCAEPKIVAYHEAK 395
LYP+DP++AAFAD+AVD+VSD+H + I EKD K ++RKDLV L WL N EK L+LAGG YFAG +LSIGDIAVVAR+ W+ +G + +G+PSTL+ ++PLLS+LV R+ AEP+IVAY E +
Sbjct: 27 LYPNDPIQAAFADSAVDAVSDIHGYMRGIIFEKDADAKAQLRKDLVETLLPPWLTNSEKALKLAGGKYFAGDKLSIGDIAVVARLNWLTDG--TFEGVPSTLLEEFPLLSSLVQRIMAEPRIVAYMEGR 153
BLAST of mRNA_H-paniculata_contig20018.5140.1 vs. uniprot
Match: D8LHF0_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHF0_ECTSI) HSP 1 Score: 153 bits (386), Expect = 2.440e-39 Identity = 76/129 (58.91%), Postives = 100/129 (77.52%), Query Frame = 3
Query: 9 LYPHDPVEAAFADAAVDSVSDMHHKLIPSIVEKDMAKKLEMRKDLVNNFLSKWLANLEKNLELAGGDYFAGGRLSIGDIAVVARMLWMKEGIPSLDGIPSTLINDYPLLSALVDRVCAEPKIVAYHEAK 395
LYP DP++AAFAD+A D+VSD+ + I EKD KK ++RKDLV L WLANLEK L+LAGG+YFAG +LSIGDIAVVAR+ W+ +G + +G+PSTL+++ PL+S+LV RV AEP+IVAY E +
Sbjct: 77 LYPTDPIQAAFADSATDAVSDIQGYMRGIIFEKDADKKAQLRKDLVETLLPTWLANLEKALKLAGGEYFAGDKLSIGDIAVVARLNWLTDG--TFEGVPSTLLDESPLVSSLVQRVMAEPRIVAYMEER 203
BLAST of mRNA_H-paniculata_contig20018.5140.1 vs. uniprot
Match: D8LK37_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK37_ECTSI) HSP 1 Score: 145 bits (366), Expect = 1.610e-36 Identity = 72/129 (55.81%), Postives = 94/129 (72.87%), Query Frame = 3
Query: 9 LYPHDPVEAAFADAAVDSVSDMHHKLIPSIVEKDMAKKLEMRKDLVNNFLSKWLANLEKNLELAGGDYFAGGRLSIGDIAVVARMLWMKEGIPSLDGIPSTLINDYPLLSALVDRVCAEPKIVAYHEAK 395
LYP DP++AAFAD+A D+V+DMH + EKD K ++ KDLV L WLANLEK L+LAGG YFAG +LSIGDIAVVAR+ W+ +G + +PS ++ ++PLLS+LV RV AEP+IVAY E +
Sbjct: 77 LYPTDPIQAAFADSATDAVNDMHGHMRAIFFEKDADAKTQLLKDLVEKLLPPWLANLEKALKLAGGKYFAGDKLSIGDIAVVARLNWLTDGTFD-ESVPSAILEEFPLLSSLVQRVMAEPRIVAYMEER 204
BLAST of mRNA_H-paniculata_contig20018.5140.1 vs. uniprot
Match: A0A6H5KRV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRV2_9PHAE) HSP 1 Score: 115 bits (289), Expect = 6.150e-26 Identity = 57/126 (45.24%), Postives = 83/126 (65.87%), Query Frame = 3
Query: 6 GLYPHDPVEAAFADAAVDSVSDMHHKLIPSIVEKDMAKKLEMRKDLVNNFLSKWLANLEKNLELAGGDYFAGGRLSIGDIAVVARMLWMKEGIPSLDGIPSTLINDYPLLSALVDRVCAEPKIVAY 383
GL P D + AA DA +D V+D+H + PS +EKD AKK+EMR DL NF+ KWL+N+EK L G +F ++++ DI + R+ M+ G+ LDGIP+T+ + YP L A+ D V +EPK+ A+
Sbjct: 77 GLNPSDDLAAAKCDAIMDCVTDLHINIRPSFMEKDEAKKMEMRADLAANFIPKWLSNMEKQLSSTDGTFFFD-KMTVADIMIACRLHPMRNGV--LDGIPTTIADSYPSLCAMCDAVVSEPKVAAF 199
BLAST of mRNA_H-paniculata_contig20018.5140.1 vs. uniprot
Match: D7FHE9_ECTSI (Glutathione S-transferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHE9_ECTSI) HSP 1 Score: 96.3 bits (238), Expect = 3.880e-20 Identity = 47/110 (42.73%), Postives = 72/110 (65.45%), Query Frame = 3
Query: 54 VDSVSDMHHKLIPSIVEKDMAKKLEMRKDLVNNFLSKWLANLEKNLELAGGDYFAGGRLSIGDIAVVARMLWMKEGIPSLDGIPSTLINDYPLLSALVDRVCAEPKIVAY 383
+D +D + + PS +EKD AKK+EMR DL N++ KWL+N+EK L G +F G++++ D+ + R+ MK G+ LDGIP+T+ + P L AL D V +EPK+ A+
Sbjct: 1 MDCATDYYINIRPSFMEKDEAKKMEMRADLAANYIPKWLSNMEKQLSSTDGTFF-DGQMTVADMMIAYRLHHMKNGV--LDGIPTTIADSCPSLCALYDAVVSEPKVAAF 107
BLAST of mRNA_H-paniculata_contig20018.5140.1 vs. uniprot
Match: A0A061SAH2_9CHLO (Prostaglandin-H2 D-isomerase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SAH2_9CHLO) HSP 1 Score: 94.7 bits (234), Expect = 1.530e-18 Identity = 54/132 (40.91%), Postives = 79/132 (59.85%), Query Frame = 3
Query: 3 AGLYPHDPVEAAFADAAVDSVSDMHHKLIPSIVEKDMAKKLEMRKDLVNNFLSKWLANLEKNLELAGGD-YFAGGRLSIGDIAVVARMLWMKEGIPSLDGIPSTLINDYPLLSALVDRVCAEPKIVAYHEAK 395
AGLYP DPVEA D VD++ DM + P++ E+D KK+EMRK L L KWL K++E G Y G L+I D+ + + + G+ LDGIP T+ +P ++AL+++V A+ K+ A+ EAK
Sbjct: 74 AGLYPTDPVEALAVDQIVDALEDMFLHVKPTVQEQDEKKKMEMRKVLAEETLPKWLGYFNKHIEENGSSGYIVGDSLTIADLKLYTLIGLLTSGM--LDGIPKTIAEPFPKVTALLEKVGADEKVKAF-EAK 202
BLAST of mRNA_H-paniculata_contig20018.5140.1 vs. uniprot
Match: A0A0S8EJL0_9DELT (Glutathione S-transferase n=1 Tax=Myxococcales bacterium SG8_38_1 TaxID=1703408 RepID=A0A0S8EJL0_9DELT) HSP 1 Score: 89.0 bits (219), Expect = 1.570e-16 Identity = 51/129 (39.53%), Postives = 79/129 (61.24%), Query Frame = 3
Query: 3 AGLYPHDPVEAAFADAAVDSVSDMHHKLIPSIVEKDMAKKLEMRKDLVNNFLSKWLANLEKNLELAGGDYFAGGRLSIGDIAVVARMLWMKEGIPSLDGIPSTLINDY-PLLSALVDRVCAEPKIVAYH 386
AGLYP DP+EAAF D A+D+V D+ + + ++ KD A+K R+ L + ++ +L L+ LE GG+YFA RL++ D+ V+ + ++ GI LD +PS L + P L +DRV A PK+ Y+
Sbjct: 76 AGLYPSDPLEAAFCDEAMDAVEDIVSQQVVTMSIKDEAEKKAAREALADGPIALYLERLQAILEARGGEYFADDRLTVADLKVMVWVRGLRAGI--LDYVPSDLPDKLAPKLVEHLDRVLAHPKVAEYY 202
BLAST of mRNA_H-paniculata_contig20018.5140.1 vs. uniprot
Match: A0A835T257_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835T257_CHLIN) HSP 1 Score: 87.8 bits (216), Expect = 4.690e-16 Identity = 49/129 (37.98%), Postives = 75/129 (58.14%), Query Frame = 3
Query: 3 AGLYPHDPVEAAFADAAVDSVSDMHHKLIPSIVEKDMAKKLEMRKDLVNNFLSKWLANLEKNLELAGGDYFAGGRLSIGDIAVVARMLWMKEGIPSLDGIPSTLINDYPLLSALVDRVCAEPKIVAYHE 389
AGLYP DP++AAFAD AV ++D + L S + +K++ R++++ S+ L LEK + GG Y AG +LS D+A+ M G DGIP L+ DYP L A +++ +EP + AY++
Sbjct: 75 AGLYPEDPLQAAFADQAVFLLNDFND-LFTSTYNLPLEEKVKARQEILAGKGSEKLKMLEKLVASVGGKYLAGDKLSYADLALFVSFSTMTSG--QYDGIPKDLLKDYPTLKAFRNKIASEPGVKAYYD 200 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20018.5140.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig20018.5140.1 >prot_H-paniculata_contig20018.5140.1 ID=prot_H-paniculata_contig20018.5140.1|Name=mRNA_H-paniculata_contig20018.5140.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=115bp MHHKLIPSIVEKDMAKKLEMRKDLVNNFLSKWLANLEKNLELAGGDYFAGback to top mRNA from alignment at H-paniculata_contig20018:290..3663+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig20018.5140.1 ID=mRNA_H-paniculata_contig20018.5140.1|Name=mRNA_H-paniculata_contig20018.5140.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3374bp|location=Sequence derived from alignment at H-paniculata_contig20018:290..3663+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig20018:290..3663+ >mRNA_H-paniculata_contig20018.5140.1 ID=mRNA_H-paniculata_contig20018.5140.1|Name=mRNA_H-paniculata_contig20018.5140.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=690bp|location=Sequence derived from alignment at H-paniculata_contig20018:290..3663+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |