prot_H-paniculata_contig108.513.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig108.513.1
Unique Nameprot_H-paniculata_contig108.513.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length77
Homology
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BLAST of mRNA_H-paniculata_contig108.513.1 vs. uniprot
Match: A0A6H5LAN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAN5_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 3.840e-12
Identity = 35/68 (51.47%), Postives = 40/68 (58.82%), Query Frame = 0 
Query:    9 GFSERFEDERCAGGDLVDTWATRPTTAEQRPYRTGVGAGAVFDVGGQWLAAEREKNAERDDLRQREPW 76
            G   R+      G DLVDTW  RPT+AE  PY TG G+GAVFD GG+WLAAE+     R      EPW
Sbjct:  370 GVDNRYLATAGEGVDLVDTWGMRPTSAEHHPYGTGKGSGAVFDAGGEWLAAEKRGEMRRPV----EPW 433
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BLAST of mRNA_H-paniculata_contig108.513.1 vs. uniprot
Match: D7FVH9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVH9_ECTSI)

HSP 1 Score: 69.7 bits (169), Expect = 3.840e-12
Identity = 34/68 (50.00%), Postives = 40/68 (58.82%), Query Frame = 0 
Query:    9 GFSERFEDERCAGGDLVDTWATRPTTAEQRPYRTGVGAGAVFDVGGQWLAAEREKNAERDDLRQREPW 76
            G  +R+      G DLVDTW  RP +AE  PY TG G+GAVFD GG+WLAAE+     R      EPW
Sbjct:  421 GVDDRYLATAGEGADLVDTWGMRPASAEHHPYGTGKGSGAVFDAGGEWLAAEKRGEMRRPV----EPW 484
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig108.513.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LAN5_9PHAE3.840e-1251.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVH9_ECTSI3.840e-1250.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig108contigH-paniculata_contig108:51560..52406 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig108.513.1mRNA_H-paniculata_contig108.513.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig108 51560..52406 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig108.513.1 ID=prot_H-paniculata_contig108.513.1|Name=mRNA_H-paniculata_contig108.513.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=77bp
WDCSDQGQGFSERFEDERCAGGDLVDTWATRPTTAEQRPYRTGVGAGAVF
DVGGQWLAAEREKNAERDDLRQREPW*
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