prot_H-paniculata_contig200.5131.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig200.5131.1
Unique Nameprot_H-paniculata_contig200.5131.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length312
Homology
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BLAST of mRNA_H-paniculata_contig200.5131.1 vs. uniprot
Match: A0A6H5K4Q6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4Q6_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 1.900e-24
Identity = 92/149 (61.74%), Postives = 97/149 (65.10%), Query Frame = 0 
Query:    3 GVTKRATWADDTDSDVDEAPKANTAAAGGGKK--KTGMSWADSDTESDADVAAPPDKKLDAFGESESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPAITGEDATQMQNLSKKERKALKQKQLDDLDALLGEFGVD 149
            GV KRA WADDTDSDVDE       AA G K   KT  SWADSDTESD D A PP KKLDAFGES  XXXXXXXXXXXXXX                             A+TG+DAT++ NLSKKERKALKQK+LDDLDALLGEFGVD
Sbjct:    4 GVPKRAQWADDTDSDVDE-----VVAAAGNKSSGKTMTSWADSDTESDVDNAGPPPKKLDAFGESXXXXXXXXXXXXXXXXPPPNTGVVESVAVAAEEGPESV-------AVTGDDATKVLNLSKKERKALKQKELDDLDALLGEFGVD 140
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BLAST of mRNA_H-paniculata_contig200.5131.1 vs. uniprot
Match: D7G999_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G999_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 4.870e-20
Identity = 80/129 (62.02%), Postives = 85/129 (65.89%), Query Frame = 0 
Query:   34 KKTGMSWADSDTESDADVAAPPDKKLDAFGESESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPAITGEDATQMQNLSKKERKALKQKQLDDLDALLGEFGVDAGVEETVAPANGS 162
            KK   SWADSDTESD D A PP KKLDAFGESE XXXXXXXXXXXXXXX                            A+TG+DAT++ NLSKKERKALKQK+LDDLDALLGEFGVD   EE    ANGS
Sbjct:  115 KKGMTSWADSDTESDVDNAGPPPKKLDAFGESEXXXXXXXXXXXXXXXXEPPANTGVVGSAAVAGEEEPE-----SAAVTGDDATKVLNLSKKERKALKQKELDDLDALLGEFGVDVAPEEPATEANGS 238
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig200.5131.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K4Q6_9PHAE1.900e-2461.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G999_ECTSI4.870e-2062.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 279..299
NoneNo IPR availablePANTHERPTHR31365:SF15EXPRESSED PROTEINcoord: 36..308
NoneNo IPR availablePANTHERPTHR31365FAMILY NOT NAMEDcoord: 36..308

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig200contigH-paniculata_contig200:26272..40472 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig200.5131.1mRNA_H-paniculata_contig200.5131.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig200 24926..42647 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig200.5131.1 ID=prot_H-paniculata_contig200.5131.1|Name=mRNA_H-paniculata_contig200.5131.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=312bp
MSGVTKRATWADDTDSDVDEAPKANTAAAGGGKKKTGMSWADSDTESDAD
VAAPPDKKLDAFGESESESESESEAEEDDSEDDGDEDEDTRADATGGEQG
GGEAEGSAEPAITGEDATQMQNLSKKERKALKQKQLDDLDALLGEFGVDA
GVEETVAPANGSTAGGAAAAAAEAEAATEASGAGLPQENLVGPGGEGAEG
GKKKKKKKKDKKENVDSSKVGIYVARGQGTGGRTAEVCHEGVGGRVEEEP
ASVVVQSISAALKNKGKKKSGQSSAKPTAAALKAAKEAAEKDAKKKKKRD
KKNFNQAPPGK*
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