prot_H-paniculata_contig20.5124.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig20.5124.1
Unique Nameprot_H-paniculata_contig20.5124.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length414
Homology
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BLAST of mRNA_H-paniculata_contig20.5124.1 vs. uniprot
Match: D7G599_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G599_ECTSI)

HSP 1 Score: 301 bits (772), Expect = 2.970e-89
Identity = 147/210 (70.00%), Postives = 171/210 (81.43%), Query Frame = 0 
Query:  204 RDQDMFVPSATFAGGKQGYVFKRGDCGVGYYKDGYVDRPKRGSQTPTRRPWNAGPGDDAVRRGPIGPILKPFKNIPTLKNHTEKQGNAAEESDMRPFMARMVAQRNSRGFQSTLLDRERVLDAHILSLLEEFNDPTFFKKKHGYNVHGQMLGRDGKMIVKPHVAKTEEEKAKLSWYRKAYEDQLGEHLPSKRLGDSIEARREAYAYSRYF 413
            +D+ +FV S+ F G K GYVFK GD G+G+Y DGYVDR  R  ++ + RPWNAGPG+ A +RGP+GP  KPFK I  +   T+K+  AAEE+D RPFMARMVAQRNSRGFQS L +RERVLD HIL LLE+F+DP FFKKKHGYNVHGQMLG+DGKMIVK    KTEEEKA+L WYRK YED+LG+HLPSKRLGDSIEARREAYAYSR+F
Sbjct:  173 KDEGVFVSSSCFTGAKDGYVFKTGDKGLGFYVDGYVDRQARRKRSLSHRPWNAGPGEQATKRGPLGPAPKPFKKI--VPYRTQKEKRAAEENDTRPFMARMVAQRNSRGFQSNLFERERVLDKHILYLLEKFSDPAFFKKKHGYNVHGQMLGKDGKMIVKVTPEKTEEEKARLPWYRKVYEDRLGKHLPSKRLGDSIEARREAYAYSRHF 380
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BLAST of mRNA_H-paniculata_contig20.5124.1 vs. uniprot
Match: A0A6H5JWU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWU4_9PHAE)

HSP 1 Score: 224 bits (572), Expect = 2.360e-61
Identity = 106/160 (66.25%), Postives = 129/160 (80.62%), Query Frame = 0 
Query:  204 RDQDMFVPSATFAGGKQGYVFKRGDCGVGYYKDGYVDRPKRGSQTPTRRPWNAGPGDDAVRRGPIGPILKPFKNIPTLKNHTEKQGNAAEESDMRPFMARMVAQRNSRGFQSTLLDRERVLDAHILSLLEEFNDPTFFKKKHGYNVHGQMLGRDGKMIVK 363
            +D+++F+ S+ F G K GYVFK GD G+G+Y DGYVDR  R  ++ + RPWNAGPG++A +RGP+GP  KPFK I  +   T+K+  AAEE+D RPFMARMVAQRNSRGFQS L +RERVLD HIL LLE+F+DP FFKKKHGYNVHGQMLG+DGKMIVK
Sbjct:  172 KDEEVFISSSCFTGAKDGYVFKTGDKGLGFYVDGYVDRQVRRKRSLSHRPWNAGPGEEATKRGPLGPAPKPFKKI--VPYRTQKEKRAAEENDTRPFMARMVAQRNSRGFQSNLFERERVLDKHILYLLEKFSDPAFFKKKHGYNVHGQMLGKDGKMIVK 329
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20.5124.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G599_ECTSI2.970e-8970.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JWU4_9PHAE2.360e-6166.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20contigH-paniculata_contig20:35510..37141 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20.5124.1mRNA_H-paniculata_contig20.5124.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig20 35510..37141 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig20.5124.1 ID=prot_H-paniculata_contig20.5124.1|Name=mRNA_H-paniculata_contig20.5124.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=414bp
MSTLTAGVTKEIAIVDTVKDENGVVLQDTDVPGTPLACNEQGKPVMLESG
IDGVGQPSRARGTNMPPVEQEMAPSTAVLARTEVAHDGASNCELVNEQDG
SKNKLAPALPAVGSYATESTRLTTVELRVDGTLDGTKQLMVTESAMNQVG
GAISKVGISSCNPVKRTKHDGEEIASEDKRLHSMRTTNSCISEEEGTCKT
NSQRDQDMFVPSATFAGGKQGYVFKRGDCGVGYYKDGYVDRPKRGSQTPT
RRPWNAGPGDDAVRRGPIGPILKPFKNIPTLKNHTEKQGNAAEESDMRPF
MARMVAQRNSRGFQSTLLDRERVLDAHILSLLEEFNDPTFFKKKHGYNVH
GQMLGRDGKMIVKPHVAKTEEEKAKLSWYRKAYEDQLGEHLPSKRLGDSI
EARREAYAYSRYFI
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