prot_H-paniculata_contig20.5121.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig20.5121.1
Unique Nameprot_H-paniculata_contig20.5121.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length393
Homology
BLAST of mRNA_H-paniculata_contig20.5121.1 vs. uniprot
Match: A0A6H5JWU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWU4_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 1.800e-22
Identity = 110/321 (34.27%), Postives = 150/321 (46.73%), Query Frame = 0
Query:   11 LSVRARRILAAQQPGTPLHSAFSTYSNYPYLL------------ASTQGSHKSPAPPLGGRAVGD--FSPPGSPEGHSWTRVGEGSKH-AWAEITESASARGRSLKSTVKYGKGTPRPHSAAPEAPGRIFTSKRRQSKGCDIRNPGSADASSVSTPATASVSEGISRLWREKDFDVIDGDQHGNCAESRNLQLQGDIGVTVLCSRLCGPS-DMVYKRAAWPSRPERPATSRPCRR--KARTTRKVSKVRDIVPKIYPDERENESHDKDGAGSTSDSTRDELNVDKKSAPSAALDV------LEDRLSTSSWRRVNQRRKVF 307
            +S RARRILAAQ PGTPLHS FSTYSN P+ L            A T+ S   P+P L      D  F   G        R+G G++  AW EI+ S ++      S    G    RPHSAA +   ++ T  RR +  C  R P  +  ++V+    +S ++      RE + D      H +  +SR+L +Q   GVTVL +RLC PS D+VYKR+ WP   E PA SRP RR  K R T   + V      +   E E ++   D +              K   P    D       +E+ L  SS +RVN R+++F
Sbjct:  645 ISPRARRILAAQAPGTPLHSVFSTYSNDPFPLETRQRPSAQSTPARTEYSGNRPSPTLTTEPCTDTLFQTSG--------RIGLGTQQRAWVEISCSPTS------SQTLRGGFVARPHSAAAKISKKLRTPPRRPATACGTRVPRESTDNAVAASNVSSTNQA-----REHEQD------HRSDEQSRDLHVQSGPGVTVLWARLCSPSSDLVYKRSVWP---EAPAASRPTRRRGKPRKTSATAPVNGTT--VAEGEHEWDATPGDPSTGPGPIVAGSSGGGKPKLPRGTTDTGGPLEDMENSLYASSSQRVNHRKRIF 935          
BLAST of mRNA_H-paniculata_contig20.5121.1 vs. uniprot
Match: D7G599_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G599_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 2.690e-20
Identity = 105/311 (33.76%), Postives = 148/311 (47.59%), Query Frame = 0
Query:   11 LSVRARRILAAQQPGTPLHSAFSTYSNYPYLLASTQGSHKSPAPPLGGRAVGDFSPPGSPEGHSWT------RVGEGSKH-AWAEITESASARGRSLKSTVKYGKGTPRPHSAAPEAPGRIFTSKRRQSKGCDIRNPGSADASSVSTPATASVSEGISRLWREKDFDVIDGDQHGNCAESRNLQLQGDIGVTVLCSRLCGPS-DMVYKRAAWPSRPERPATSRPCR-----RKARTTRKVSKVRDIVPKIYPDERENESHDKDGAGSTSDSTRDELNVDKKSAPSAA-LDVLEDRLSTSSWRRVNQRRKVF 307
            +S RARRILAAQ PGTPLHS FSTYSN P+ L + Q       P     +     P  + E  + T      RVG G++  AWAEI+ S ++      S    G    RP SAA E    + T  RR +  C  R P  + A++V+    +S ++      RE +        H +  +SR+L +Q   GVTVL +RLC PS D+VYKR+ WP   E  A SR  R     RK   T  V+   +   +   D    +     G     DS   +  + + +  +   L+ +E+ L  SS +RVN R++VF
Sbjct:  697 ISPRARRILAAQAPGTPLHSVFSTYSNDPFPLETRQRPSAQSTPARTEYSANRPWPTPTTEPRTDTLFQTSGRVGLGTQQRAWAEISCSPTS------SQTLRGDFVARPRSAAAEISKNLQTPPRRPATACGTRVPRESTANAVAASNVSSANQA-----REHE------QGHRSDEQSRDLHVQNGPGVTVLWARLCSPSSDLVYKRSVWP---EASAASRQTRPRGKPRKTSATAPVNATTEAEGEHEWDATPGDPSTGPGPIDAGDSGGGKPKLPRGTTDTGGPLEDMENSLYASSSQRVNHRKRVF 987          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20.5121.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JWU4_9PHAE1.800e-2234.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G599_ECTSI2.690e-2033.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20contigH-paniculata_contig20:31542..33270 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20.5121.1mRNA_H-paniculata_contig20.5121.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig20 28883..33752 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig20.5121.1 ID=prot_H-paniculata_contig20.5121.1|Name=mRNA_H-paniculata_contig20.5121.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=393bp
MKHRVLVRKELSVRARRILAAQQPGTPLHSAFSTYSNYPYLLASTQGSHK
SPAPPLGGRAVGDFSPPGSPEGHSWTRVGEGSKHAWAEITESASARGRSL
KSTVKYGKGTPRPHSAAPEAPGRIFTSKRRQSKGCDIRNPGSADASSVST
PATASVSEGISRLWREKDFDVIDGDQHGNCAESRNLQLQGDIGVTVLCSR
LCGPSDMVYKRAAWPSRPERPATSRPCRRKARTTRKVSKVRDIVPKIYPD
ERENESHDKDGAGSTSDSTRDELNVDKKSAPSAALDVLEDRLSTSSWRRV
NQRRKVFLIDHDESVYGILVLPSTLRVPVGITIPTLGSVDWAAVAAINLE
YIVVRHATGEKGGENDDNEGAACAPKWSFRWTWIGPRWTQSF*
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