mRNA_H-paniculata_contig2.5117.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2.5117.1 vs. uniprot
Match: D7FKH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKH2_ECTSI) HSP 1 Score: 599 bits (1545), Expect = 2.730e-210 Identity = 303/398 (76.13%), Postives = 330/398 (82.91%), Query Frame = 3
Query: 351 RHLSSFYAA--FDQPQLPNSGSVTGEILEHAVNLRRSRPGDVINIPYELTVGYGLRDFWQAAFSTHDRINTSTPFSRSLGLQDQVLPFSLMLFLASSMSHVNAAVVQVAYRNVKYLWPGFAGDTFTKTFEIKGIRNTSDKERSTYDFTCRLVNQRGKVCMECDRATMFPFYAPPSPSRSVDFDAPNGGSNGGTGATAEQT-----VDSLRDHVIKQSEKLAELGGQSLRRLRAGQLIVHTPARPLSATQSMELSSLARLTHSRHFDTVKHGADGLLVPAGLILALANSLSARDLHEVLHEELLYANFINPFRPGDAMTSITYIQRVEQHPNGVLEKLRVRTIGLRDMQATDIAGRPLPLELFEGEGLRTKEVERICQEFCLELLGNVVVIAEREVIRQ 1523
R SFY A + SG V G +LEHAVN++R RPGD I IPYE+TVGYGLRDFWQAAFSTHDRINTSTPF+RSLGLQDQVLPFSLMLFL+SSMSHV AA+ QVAYRN +YLWPGFAGDTFTK FEIKGIRNTSDKERSTYDFTCRLVNQRGKVCMECDR TMFPF+APPSP S AT E+ D LRDHV+KQSEKLAELGGQ+LRR AGQLI+HTPARP+S TQSMELSSLARLTHSRHFDTVKHG DGL +PAGLI+ALA SLSARDLHEVLHEEL+YANFINPFRPGDAMTSITY+QRVEQHPNGVLEKLRVRTIG++D+ D+ G PLPLELF EGLRTK VE+IC+E C EL G +VV+AEREVIRQ
Sbjct: 11 RRRLSFYTAEYVEGDTTHKSGRVLGRVLEHAVNVKRLRPGDTIRIPYEVTVGYGLRDFWQAAFSTHDRINTSTPFARSLGLQDQVLPFSLMLFLSSSMSHVEAAMTQVAYRNARYLWPGFAGDTFTKAFEIKGIRNTSDKERSTYDFTCRLVNQRGKVCMECDRTTMFPFFAPPSPRDST--------------ATPEEQPPPKPADRLRDHVVKQSEKLAELGGQTLRRFSAGQLIIHTPARPISRTQSMELSSLARLTHSRHFDTVKHGEDGLAIPAGLIVALATSLSARDLHEVLHEELMYANFINPFRPGDAMTSITYVQRVEQHPNGVLEKLRVRTIGIKDILTDDLTGMPLPLELFVDEGLRTKGVEQICRESCPELCGKIVVLAEREVIRQ 394
BLAST of mRNA_H-paniculata_contig2.5117.1 vs. uniprot
Match: A0A6H5KU73_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU73_9PHAE) HSP 1 Score: 485 bits (1248), Expect = 4.150e-166 Identity = 244/314 (77.71%), Postives = 266/314 (84.71%), Query Frame = 3
Query: 597 VLPFSLMLFLASSMSHVNAAVVQVAYRNVKYLWPGFAGDTFTKTFEIKGIRNTSDKERSTYDFTCRLVNQRGKVCMECDRATMFPFYAPPSPSRSVDFDAPNGGSNGGTGATAEQT-----VDSLRDHVIKQSEKLAELGGQSLRRLRAGQLIVHTPARPLSATQSMELSSLARLTHSRHFDTVKHGADGLLVPAGLILALANSLSARDLHEVLHEELLYANFINPFRPGDAMTSITYIQRVEQHPNGVLEKLRVRTIGLRDMQATDIAGRPLPLELFEGEGLRTKEVERICQEFCLELLGNVVVIAEREVIRQ 1523
VLPFSLMLFL+SSMSHV AA+ QVAYRN +YLWPGFAGDTFTKTFEIKGIRNTSDKERSTYDFTCRLVNQRGKVCMECDR TMFPF+APPSP S AT E+ D LRDHV+KQSEKLAELGGQ+LRR AGQLI+HTPARP+S TQSMELSSLARLTHSRHFDTVKHG DGL +PAGLI+ALA SLSARDLHEVLHEEL+YANFINPFRPGDAMTSITY+QRVEQHPNGVLEKLRVRTIG++D+ D+ G PLPLELF +GLRTK VE+IC+E C EL G +VV+AEREVIRQ
Sbjct: 40 VLPFSLMLFLSSSMSHVEAAMTQVAYRNARYLWPGFAGDTFTKTFEIKGIRNTSDKERSTYDFTCRLVNQRGKVCMECDRTTMFPFFAPPSPRDST--------------ATPEEQPPPEPADRLRDHVVKQSEKLAELGGQTLRRFSAGQLIIHTPARPISRTQSMELSSLARLTHSRHFDTVKHGEDGLAIPAGLIVALATSLSARDLHEVLHEELIYANFINPFRPGDAMTSITYVQRVEQHPNGVLEKLRVRTIGIKDILTDDLTGMPLPLELFVDKGLRTKGVEQICRESCPELCGKIVVLAEREVIRQ 339
BLAST of mRNA_H-paniculata_contig2.5117.1 vs. uniprot
Match: A0A7S2UCF5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UCF5_9STRA) HSP 1 Score: 352 bits (903), Expect = 9.310e-113 Identity = 187/378 (49.47%), Postives = 247/378 (65.34%), Query Frame = 3
Query: 408 SVTGEILEHAVNLRRSRPGDVINIPYELTVGYGLRDFWQAAFSTHDRINTSTPFSRSLGLQDQVLPFSLMLFLASSMSHVNAAVVQVAYRNVKYLWPGFAGDTFTKTFEIKGIRNTSDKERSTYDFTCRLVNQRGKVCMECDRATMFPFYAPPSPSRSVDFDAPNGGSNGGTGATAEQTVDS---LRDHVIKQSEKLAELGGQSLRRLRAGQLIVHTPARPLSATQSMELSSLARLTHSRHFDTVKHGADG-LLVPAGLILALANSLSARDLHEVLHEELLYANFINPFRPGDAMTSITYIQRVEQHPNGVLEKLRVRTIGLRDMQAT-DIA-GRPLPLELFEGEGLRTKEVERICQEFCLELLGNVVVIAEREVIRQ 1523
S+ GE+L+ AV+LR++RPGD + IPYELTV + DFWQ+AF DRI+TS PF RS+GLQD+VLPF L+LFL SSM+H +AA VQV + NV Y WP FAGDTFTK F +K +R TSD S F C LVN RG+VCM D+ +F +F G SN + EQ ++ RDH++ +S LAELG QSL+ LR GQLI HT R ++ QSM+L+SLARLTH RHFD K+ D +L P GL++ L S S+RDLHE+LHEELL F+N P + + +++Y+Q V+ G LE L VRTIG++++ D+ G LPLELF + TKE+ERIC+E C +L ++V +R +IRQ
Sbjct: 63 SIRGEVLDLAVDLRKARPGDKLEIPYELTVSEAMHDFWQSAFHGQDRISTSRPFCRSIGLQDRVLPFPLVLFLTSSMTHADAAKVQVGFENVTYHWPCFAGDTFTKNFLVKSVRTTSDGNHSVIKFYCELVNHRGRVCMSADKQMLF------------EFPITGGSSNVSSVGRMEQDSENNQLFRDHLLSKSMTLAELGSQSLKALRPGQLIFHTMYRSITLAQSMQLASLARLTHERHFDLRKYSVDTEILCPGGLVVGLTTSASSRDLHEILHEELLNVTFVNALHPNNVVGAMSYVQSVDDTIPGDLEMLLVRTIGVKNVDLVRDLGDGAHLPLELFTRTKMTTKEIERICKEHCPKLSNKIIVQMDRRIIRQ 428
BLAST of mRNA_H-paniculata_contig2.5117.1 vs. uniprot
Match: A0A7S2RYC8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RYC8_9STRA) HSP 1 Score: 347 bits (891), Expect = 3.400e-111 Identity = 179/402 (44.53%), Postives = 257/402 (63.93%), Query Frame = 3
Query: 330 RYQHLRCRHLSSFYAAFDQPQLPNSGS---VTGEILEHAVNLRRSRPGDVINIPYELTVGYGLRDFWQAAFSTHDRINTSTPFSRSLGLQDQVLPFSLMLFLASSMSHVNAAVVQVAYRNVKYLWPGFAGDTFTKTFEIKGIRNTSDKERSTYDFTCRLVNQRGKVCMECDRATMFPFYAPPSPSRSVDFDAPNGGSNGGTGATAEQTVDSLRDHVIKQSEKLAELGGQSLRRLRAGQLIVHTPARPLSATQSMELSSLARLTHSRHFDTVKHGADGLLVPAGLILALANSLSARDLHEVLHEELLYANFINPFRPGDAMTSITYIQRVEQHPNGVLEKLRVRTIGLRDMQAT-DIAGRPLPLELFEGEGLRTKEVERICQEFCLELLGNVVVIAEREVIRQ 1523
R++HL R LS+ + + + S + V GE + HA++L+R RPG+ I IPYE+TV +RDFW +AF ++DRINTSTPF+R+LG QD VLPFS++LFLA SM+H +AA VQV Y N Y WP F+GDTFT+TF IK R TSD E S + F C L NQRG+V D+ +FPF + P+ ++ + L+ H+I+ + K+ LG QSL LR GQLI+H+ RPLSATQ M+LSSLARLTH RHF+ + D + +P GL+L L S SARDLHEVLHE++L ++IN PGD + +I++++ +E++ G +E L +RT+G++++ ++ G LP+ LF R ++ E++C+E C L +V ER ++RQ
Sbjct: 20 RFRHLASRCLSTKFFSVEGTAPHGSSNLDYVVGESVNHAIDLQRVRPGEPIEIPYEVTVNSSMRDFWLSAFHSNDRINTSTPFARNLGFQDAVLPFSMILFLAGSMTHADAAKVQVGYHNAIYHWPAFSGDTFTRTFHIKSRRTTSDGENSIFTFNCVLKNQRGRVVFTTDKTMLFPFK----------LNGPDELASATPAVAMGGAKEDLKKHIIESASKIGPLGSQSLTALRPGQLILHSLCRPLSATQCMQLSSLARLTHERHFNHHVYNIDEIYIPGGLVLGLTASASARDLHEVLHEDVLQCSYINNLHPGDTVGAISFVKAMEENITGDMEMLTIRTVGVKNIDVQRELQGMALPVRLFTESVKRPRDYEQLCKEECPILSNRIVACLERRILRQ 411
BLAST of mRNA_H-paniculata_contig2.5117.1 vs. uniprot
Match: A0A7S4JXC3_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JXC3_9STRA) HSP 1 Score: 345 bits (885), Expect = 1.090e-110 Identity = 181/385 (47.01%), Postives = 255/385 (66.23%), Query Frame = 3
Query: 387 PQLPNSGS----VTGEILEHAVNLRRSRPGDVINIPYELTVGYGLRDFWQAAFSTHDRINTSTPFSRSLGLQDQVLPFSLMLFLASSMSHVNAAVVQVAYRNVKYLWPGFAGDTFTKTFEIKGIRNTSDKERSTYDFTCRLVNQRGKVCMECDRATMFPFYAPPSPSRSVDFDAPNGGSNGGTGATAEQTVDSLRDHVIKQSEKLAELGGQSLRRLRAGQLIVHTPARPLSATQSMELSSLARLTHSRHFDTVKHGADG-LLVPAGLILALANSLSARDLHEVLHEELLYANFINPFRPGDAMTSITYIQRVEQHPNGVLEKLRVRTIGLRDMQAT-DIAGRPLPLELFEGEGLRTKEVERICQEFCLELLGNVVVIAEREVIRQ 1523
P L ++ S V G+IL+ AVNLR SRPGD I+IPYELTV ++ FW + F +RINTS PF+R +GLQD+VLPFSL LFL SSM+H +AA VQV + N Y WP FAGDTFTK+F+++ IRNTSD S + F C L+NQRG+VCM D+ +F F P S V+ A + AT Q RDH+I +S+ L +LG SL L GQL++HT R ++ +QS +L+SLARLTH RHFDT ++ + +P GL+L L S ++RD+HE+LHEE+L A+F++ PG+ + +I+Y+Q ++ G LE + VRTIG+++M + D+ PLPLELF G+ T+++E+IC+E C L +V+ +R ++RQ
Sbjct: 13 PDLSSASSGESMVRGDILDLAVNLRSSRPGDKIDIPYELTVSDSMQGFWHSVFHAQNRINTSRPFARKVGLQDRVLPFSLALFLTSSMTHADAAKVQVGFGNAVYHWPAFAGDTFTKSFKVRSIRNTSDGHHSIFHFECELINQRGRVCMSADKYLIFEFTVPES---HVELPADS--------ATKGQM---FRDHLISKSDSLHDLGSHSLTTLFPGQLVLHTMNRSITFSQSQQLASLARLTHPRHFDTRRYDIHTEIFIPGGLVLGLTMSAASRDMHEILHEEILNASFVHHLHPGNVVGAISYVQSLDDGLPGDLESIVVRTIGVKNMDVSRDLKDTPLPLELFTGDAKTTQQIEKICKERCPMLANKIVLQLDRRILRQ 383
BLAST of mRNA_H-paniculata_contig2.5117.1 vs. uniprot
Match: A0A7S2UZD2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZD2_9STRA) HSP 1 Score: 344 bits (883), Expect = 4.170e-110 Identity = 174/372 (46.77%), Postives = 250/372 (67.20%), Query Frame = 3
Query: 411 VTGEILEHAVNLRRSRPGDVINIPYELTVGYGLRDFWQAAFSTHDRINTSTPFSRSLGLQDQVLPFSLMLFLASSMSHVNAAVVQVAYRNVKYLWPGFAGDTFTKTFEIKGIRNTSDKERSTYDFTCRLVNQRGKVCMECDRATMFPFYAPPSPSRSVDFDAPNGGSNGGTGATAEQTVDSLRDHVIKQSEKLAELGGQSLRRLRAGQLIVHTPARPLSATQSMELSSLARLTHSRHFDTVKHGADGLLVPAGLILALANSLSARDLHEVLHEELLYANFINPFRPGDAMTSITYIQRVEQHPNGVLEKLRVRTIGLRDMQA-TDIAGRPLPLELFEGEGLRTKEVERICQEFCLELLGNVVVIAEREVIRQ 1523
V GE+L+ L RPG+ ++IPYE+TV + ++DFWQ+AF ++DR+NTSTPF+R+LG QDQVLP+SLML L SMSH++ A VA+ +Y WPGFAGDTF K + +R+TSD++ + + F C+L NQRG++ ++ MFPF PPS V F+ SL+DH ++++E L LG QSLR+LR GQLI+HT RPL+ TQ+M+L+SL RLTH RHF+ D +LVP G I+ L S ++RDLHE+LHEE+ A +NP RPGD M +I+YI+ V+++ +G LE L ++T+G+++M + G+ LP+ LF+ + L KE+E+IC + C EL +VV AERE++RQ
Sbjct: 49 VEGEVLDQLARLEYIRPGEKLDIPYEITVSHSMQDFWQSAFYSYDRVNTSTPFARALGFQDQVLPYSLMLMLTGSMSHIDEAKSHVAWNKSRYHWPGFAGDTFRKNVRVLSLRHTSDQKNTLFTFLCKLENQRGQLVFSSEKTLMFPFLVPPS---DVVFER-------------RPQDRSLQDHFVQRAETLEALGNQSLRKLRPGQLILHTMCRPLTQTQTMQLASLMRLTHERHFNRNIFKQDEILVPGGCIMGLMMSATSRDLHEILHEEVQSAALMNPLRPGDMMGAISYIKSVDENLSGDLEVLHIKTLGIKNMDPHRALIGKKLPVSLFQ-DTLLPKEIEKICSDHCPELSHKIVVQAEREIMRQ 403
BLAST of mRNA_H-paniculata_contig2.5117.1 vs. uniprot
Match: A0A4D9D1N7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1N7_9STRA) HSP 1 Score: 323 bits (828), Expect = 9.500e-101 Identity = 175/410 (42.68%), Postives = 243/410 (59.27%), Query Frame = 3
Query: 384 QPQLPNSGSVTGEILEHAVNLRRSRPGDVINIPYELTVGYGLRDFWQAAFSTHDRINTSTPFSRSLGLQDQVLPFSLMLFLASSMSHVNAAVVQVAYRNVKYLWPGFAGDTFTKTFEIKGIRNTSDKERSTYDFTCRLVNQRGKVCMECDRATMFPFYAPPSPSRSVDFDAPNGGSNGGTGATAEQTVDSLRDHVIKQSEKLAELGGQSLRRLRAGQLIVHTPARPLSATQ-----------------------------SMELSSLARLTHSRHFDTVKHGADGLLVPAGLILALANSLSARDLHEVLHEELLYANFINPFRPGDAMTSITYIQRVEQHPNGVLEKLRVRTIGLRDMQA-TDIAGRPLPLELFEGEGLRTKEVERICQEFCLELLGNVVVIAEREVIRQ 1523
Q + + G V GE+ +HA++L RPG+ I++PYELT+ RDFWQ+ F +HDR+NTSTPF+R LG QDQVLPFSLMLFL SMSH ++A VQV ++N Y WP FAGDT TK F I+ +R S + S + F C L NQRG+V +++ +FP P S +V F A + L +H++ +++ L LG QSL+ LR GQL++H+ ARPLS Q SM+LSSL RLTH RHF+T K D + +P GL+L L S SARDLHEVLHEE++ FIN P D ++S +YI+ ++++ G LE L +RTIG++++ D+ + PL LF LRTK +E +C+ EL +V + ER ++RQ
Sbjct: 95 QGEESSGGWVVGEVTDHAIDLHDVRPGEAIDVPYELTINPSFRDFWQSVFYSHDRLNTSTPFARKLGFQDQVLPFSLMLFLTGSMSHADSATVQVGFQNAIYHWPAFAGDTITKRFVIRSVRVASSNKYSIFSFHCELKNQRGQVIFTAEKSMIFPVVLPAS---NVTFPV----------AVPPRL---LEEHLVSRADSLHALGSQSLQSLRPGQLLLHSLARPLSPAQVRGGWEXXXXXXXXXXXXXXXKTGTGTGESMQLSSLGRLTHERHFNTRKFKRDEMYIPGGLVLGLTLSASARDLHEVLHEEVIECAFINHLHPWDIVSSFSYIKEMDENITGDLEALTLRTIGVKNVDVHLDLLDQAFPLALFTTPSLRTKHMEALCKAHIPELSKKIVCVVERRILRQ 488
BLAST of mRNA_H-paniculata_contig2.5117.1 vs. uniprot
Match: A0A7S1TYY8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYY8_9STRA) HSP 1 Score: 317 bits (812), Expect = 1.100e-99 Identity = 170/373 (45.58%), Postives = 237/373 (63.54%), Query Frame = 3
Query: 411 VTGEILEHAVNLRRSRPGDVINIPYELTVGYGLRDFWQAAFSTHDRINTSTPFSRSLGLQDQVLPFSLMLFLASSMSHVNAAVVQVAYRNVKYLWPGFAGDTFTKTFEIKGIRNTSDKERSTYDFTCRLVNQRGKVCMECDRATMFPFYAPPSPSRSVDFDAPNGGSNGGTGATAEQTVDSLRDHVIKQSEKLAELGGQSLRRLRAGQLIVHTPARPLSATQSMELSSLARLTHSRHFDTVKHGA-DGLLVPAGLILALANSLSARDLHEVLHEELLYANFINPFRPGDAMTSITYIQRVEQHPNGVLEKLRVRTIGLRDMQATDIAGRPLPLELFEGEGLRTKEVERICQEFCLELLG-NVVVIAEREVIRQ 1523
V G+++++AV+ R RPGD I +PYE+TVG +DFW +AF +H+RINTSTPF+ LG DQ+LPFSLMLFLA SMSH +AA VQV Y N + P +AGDTFTK F +K +RNTSD E S F CRL+NQ +V CD+A +FPF S AP +D L ++ L ELG QSL+ LR GQL++H+ ARPL+ TQS +L+SLARLTH RHFD + + VP GLI+ LA S S+RD HEVLHE + + +FI PGDA+ +I++I+ ++++ G LE + VRT+G++++ + +P LF L+ V++I Q L++LG N+VV +R+++RQ
Sbjct: 31 VQGDMVDNAVHFERLRPGDHIEVPYEVTVGDSFKDFWHSAFYSHERINTSTPFATRLGFDDQILPFSLMLFLAGSMSHADAAKVQVYYSNAVFCHPAYAGDTFTKHFVVKNVRNTSDNEHSIITFGCRLLNQHERVVFHCDKAMLFPFPRDLDASGDYKPSAP---------------IDGLLGAFTTRAVVLGELGSQSLQPLRPGQLLLHSLARPLTDTQSRQLASLARLTHDRHFDNRQFPQHENRYVPGGLIVGLALSASSRDFHEVLHESMPHCSFIRNVHPGDAVGAISFIRNLQENVGGDLESITVRTLGIKNIDIQALKDVRIPTRLFTEPRLQKSTVDKIMQGDELKVLGENIVVSVDRKILRQ 388
BLAST of mRNA_H-paniculata_contig2.5117.1 vs. uniprot
Match: A0A7S2F3A4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F3A4_9STRA) HSP 1 Score: 318 bits (815), Expect = 1.280e-99 Identity = 176/411 (42.82%), Postives = 253/411 (61.56%), Query Frame = 3
Query: 309 SRLDVTLRYQHLRCRHLSS--FYAAFDQPQLPNSGSVTGEILEHAVNLRRSRPGDVINIPYELTVGYGLRDFWQAAFSTHDRINTSTPFSRSLGLQDQVLPFSLMLFLASSMSHVNAAVVQVAYRNVKYLWPGFAGDTFTKTFEIKGIRNTSDKERSTYDFTCRLVNQRGKVCMECDRATMFPFYAPPSPSRSVDFDAPNGGSNGGTGATAEQ---TVDSLRDHVIKQSEKLAELGGQSLRRLRAGQLIVHTPARPLSATQSMELSSLARLTHSRHFDTVKHGADGLLVPAGLILALANSLSARDLHEVLHEELLYANFINPFRPGDAMTSITYIQRVEQHPNGVLEKLRVRTIGLRDMQA-TDIAGRPLPLELFEGEGLRTKEVERICQEFCLELLGNVVVIAEREVIRQ 1523
SR ++ +Y LR S FY + + + + G + GE+++ +V+LR+ PGD ++IPYELTV +RDFWQ++F ++DRI+ S PF+R LG QD +LPF LMLFL SMSH +AA VQV Y N Y +P + GDTFT+ +IK RNTS E S + F C L NQRG+V D++ +FPF + SV++D AE+ T D ++ V K E+ ++ GQSL LR GQL++H+ ARPLS TQ M+LSS+A+LTH RHF+ + VP GL+L L S SARDLHEVLHEEL+ FIN PGD + +++ ++ VE++ G +E + +RTIG++++ ++ P+P ELF G+ R + E IC+ C L +V ER ++RQ
Sbjct: 30 SRYQISPQYPLLRLLSTPSTDFYP-YPKQKAGDMGFLIGEVVDASVDLRQMLPGDSLDIPYELTVNSSIRDFWQSSFHSNDRIHNSKPFARRLGFQDTLLPFGLMLFLTGSMSHADAAKVQVGYTNGHYCFPAYPGDTFTRRLQIKSRRNTSSGENSLFTFQCELRNQRGQVVFITDKSMLFPFVL--DDNSSVEYDP-----------VAERPFSTSDMMKHLVDKFQEQEVDIRGQSLNTLRPGQLLLHSMARPLSTTQIMQLSSIAKLTHERHFNHHVFDIANIYVPGGLVLGLVQSASARDLHEVLHEELVDCKFINNLHPGDTVGALSMVKSVEENVTGEIESIVLRTIGVKNLDVGRELNQVPIPRELFSGKVDRPRAYEEICERGCPILHKKIVACVERRILRQ 426
BLAST of mRNA_H-paniculata_contig2.5117.1 vs. uniprot
Match: A0A7R9U4Q5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4Q5_9STRA) HSP 1 Score: 313 bits (801), Expect = 6.800e-98 Identity = 174/409 (42.54%), Postives = 250/409 (61.12%), Query Frame = 3
Query: 312 RLDVTLRYQHLRCRHLSSFYAAFDQPQLPNSG---SVTGEILEHAVNLRRSRPGDVINIPYELTVGYGLRDFWQAAFSTHDRINTSTPFSRSLGLQDQVLPFSLMLFLASSMSHVNAAVVQVAYRNVKYLWPGFAGDTFTKTFEIKGIRNTSDKERSTYDFTCRLVNQRGKVCMECDRATMFPFYAPPSPSRSVDFDAPNGGSNGGTGATAEQTVDSLRDHVIKQSEKLAELGGQSLRRLRAGQLIVHTPARPLSATQSMELSSLARLTHSRHFDTVKHGADG-LLVPAGLILALANSLSARDLHEVLHEELLYANFINPFRPGDAMTSITYIQRVEQHPNGVLEKLRVRTIGLRDMQATDIAGRPLPLELFEGEGLRTKEVERICQEFCLELLGN-VVVIAEREVIRQ 1523
R R+ R RHLS F + Q P +V+G ++++AV R+ RPGD I +PYE+T+ +R FWQ+AF H+RINTSTPF+ +LG +DQ+LPF L+LFLA SMSH +AA +Q+AY N Y +P +AGDTF K F +K +R TSDKE+S F CRL+NQ+ +V CD+ +FPF P + P Q VD L +S L ELG QS+ LR GQLI+H+ RPL+ TQS +LS+LARLTH RHFD++++ +P GLI+ + S S+RD HEVLHE + +FI PGD++ +I++I +++ G LE + VRTIG+++ D+ GR +P +LF L+ ++ I + L LG+ +VV A+R+++RQ
Sbjct: 12 RARAVARWGRCRRRHLS-VTPGFYRVQTPFGKFPETVSGGLVDNAVEFRKLRPGDHIQVPYEVTIDDNVRVFWQSAFYAHERINTSTPFATALGFKDQLLPFPLLLFLAGSMSHADAAKMQIAYSNAYYCYPAYAGDTFRKEFVVKKVRTTSDKEQSIMTFGCRLLNQQDRVIFHCDKVMLFPF---PRDDEAAGEYMP------------VQPVDGLMGAFATRSSVLGELGNQSVTPLRPGQLILHSLQRPLTDTQSRQLSTLARLTHERHFDSLQYPQQSDRYIPGGLIVGMLMSASSRDFHEVLHEAIPNCSFIRKVHPGDSVGAISFITDLQEDVGGDLESITVRTIGVKNFAVRDLRGRQIPTKLFTEPRLQQSSIDAILEGTDLGDLGDRIVVAADRKILRQ 404 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2.5117.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2.5117.1 >prot_H-paniculata_contig2.5117.1 ID=prot_H-paniculata_contig2.5117.1|Name=mRNA_H-paniculata_contig2.5117.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=497bp MIHESHSSYVQHSLTVYCSMDLSRLDVTLRYQHLRCRHLSSFYAAFDQPQback to top mRNA from alignment at H-paniculata_contig2:91391..110874+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2.5117.1 ID=mRNA_H-paniculata_contig2.5117.1|Name=mRNA_H-paniculata_contig2.5117.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=19484bp|location=Sequence derived from alignment at H-paniculata_contig2:91391..110874+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2:91391..110874+ >mRNA_H-paniculata_contig2.5117.1 ID=mRNA_H-paniculata_contig2.5117.1|Name=mRNA_H-paniculata_contig2.5117.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2982bp|location=Sequence derived from alignment at H-paniculata_contig2:91391..110874+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |