prot_H-paniculata_contig2.5116.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2.5116.1
Unique Nameprot_H-paniculata_contig2.5116.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length730
Homology
BLAST of mRNA_H-paniculata_contig2.5116.1 vs. uniprot
Match: D7FKH1_ECTSI (EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKH1_ECTSI)

HSP 1 Score: 446 bits (1147), Expect = 4.720e-143
Identity = 468/699 (66.95%), Postives = 505/699 (72.25%), Query Frame = 0
Query:    1 MHDSHRRCEFAGCTKWPLYAFEGEKAKYCSQHKDEGMVDVRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRAGYTLLMLAQRERIAAAEAEALEESQAQR-TRPRAPVSGSWPGEEMAFSDYR-RWDAS----SSGNSSFSGGQPTPGS-SGAFSSNPSSTGSFMSGQRPSSAGG----FPTDTGYLXXXXXXXXXXLSSEQSSVGMNPPGSPQKHNPREWLWTT----GQQGPRRPPPIKNPAEAGVLGIAGRP-SPPLDSTRGDSPGNDQWTKPSS---AHAVMYPAVKRHCSPQRRSFSHSPEPGSRTMLGLTGSMASLQASSPASPNIGAGLGLTPTTGGTPSPGAIGMPTPPGSSG--ALPPPHTAPRRSAQRLPQ--FPNRAVPPRNTSGPPRPPRSLSPGNMTAGRSNDGFYGISSSGRSPXXXXXXXXXXXXXXXXXXXFSGVFSPGSALGSATSAGGLNSARSSVSSTGPSPRWATSPRNRAFGHSRTRSQGSVADTLEDLSIVDPGPPTLEPLRNVAGVGGPLRSPRDRWRGPPPDRRN-SEIILPLPDRTQSDPSPGPATDGMRRSFTASLFDQ 675
            MHDSHRRCE +GCTKWPLYAFEGEKAKYCSQHKDEGMVDVRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DG AGYTLLMLAQRER+A                R RAP SGSWPG++M +SDYR RW+A+    SSG +SFSGGQP PG  +G F SN SS+GSF+S QR    GG    F  +    XXXXXXXXXX   E  S G +  G    HNP+ W+WT       QG RRPPP+KNPAEAGVLGIAGR  SP LDSTRGDSPG + WTKPSS   AHA MYPAVKRHCSP+RRSFSHSPEPGSRTM GLTGSMA LQASSPASPNI   LG +   GGTPSPGA+G+PTPPGSSG  ALPPPH A R +AQRLPQ  F NRAVP  ++ GPPRPPRSLSPG            G++S+ RSP                                                               F ++ + + GSVADTLEDLSIVDP PPTLEPLR +  V  PLRSPRDRWR    +RRN SEIILPLPDRTQ DP+PGPA+D  RRSFTASLF++
Sbjct:    1 MHDSHRRCEHSGCTKWPLYAFEGEKAKYCSQHKDEGMVDVRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGGAGYTLLMLAQRERLAXXXXXXXXXXXXXXXARDRAPASGSWPGKDMPYSDYRPRWEAAGSSGSSGGTSFSGGQPAPGGRTGTFGSNSSSSGSFLSSQRSGGGGGDSGSFTGEXXXXXXXXXXXXXXXXGEPGSAGQD--GKAAAHNPQPWVWTAQPRGSSQGARRPPPLKNPAEAGVLGIAGRQQSPLLDSTRGDSPGAE-WTKPSSTQSAHA-MYPAVKRHCSPRRRSFSHSPEPGSRTMAGLTGSMAGLQASSPASPNI-MSLGAS---GGTPSPGAMGIPTPPGSSGSAALPPPHRARRSTAQRLPQPQFQNRAVPRSSSGGPPRPPRSLSPG------------GVASTARSPD-------------------------------------------------------------GFVYALSGAGGSVADTLEDLSIVDPIPPTLEPLRTLPPVAAPLRSPRDRWRAGFLERRNNSEIILPLPDRTQPDPAPGPASDVRRRSFTASLFER 618          
BLAST of mRNA_H-paniculata_contig2.5116.1 vs. uniprot
Match: A0A835ZFU8_9STRA (EsV-1-7 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFU8_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 1.300e-6
Identity = 22/31 (70.97%), Postives = 28/31 (90.32%), Query Frame = 0
Query:    4 SHRRCEFAGCTKWPLYAFEGEKAKYCSQHKD 34
            S+RRCE  GCTKWPLYA+EGEKA++CS H++
Sbjct:   52 SYRRCEALGCTKWPLYAYEGEKARFCSAHRE 82          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2.5116.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FKH1_ECTSI4.720e-14366.95EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKH1... [more]
A0A835ZFU8_9STRA1.300e-670.97EsV-1-7 (Fragment) n=1 Tax=Tribonema minus TaxID=3... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2contigH-paniculata_contig2:84089..91142 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2.5116.1mRNA_H-paniculata_contig2.5116.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2 84089..91508 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2.5116.1 ID=prot_H-paniculata_contig2.5116.1|Name=mRNA_H-paniculata_contig2.5116.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=730bp
MHDSHRRCEFAGCTKWPLYAFEGEKAKYCSQHKDEGMVDVRSRRCQEPSC
TRQPSFGFEHQKPRFCAAHKDDGMVDVVSRRCEETDCRRRPLYGHEGEKG
RFCSYHKSEGMVDVVNKRCQHVGCKKRPVFGFEGEKGRFCSLHRSGGMVD
VVSRRCDSPGCKRQPSGTTDATKVQFCSLHRGDGRAGYTLLMLAQRERIA
AAEAEALEESQAQRTRPRAPVSGSWPGEEMAFSDYRRWDASSSGNSSFSG
GQPTPGSSGAFSSNPSSTGSFMSGQRPSSAGGFPTDTGYLSGQRRNSDGG
LSSEQSSVGMNPPGSPQKHNPREWLWTTGQQGPRRPPPIKNPAEAGVLGI
AGRPSPPLDSTRGDSPGNDQWTKPSSAHAVMYPAVKRHCSPQRRSFSHSP
EPGSRTMLGLTGSMASLQASSPASPNIGAGLGLTPTTGGTPSPGAIGMPT
PPGSSGALPPPHTAPRRSAQRLPQFPNRAVPPRNTSGPPRPPRSLSPGNM
TAGRSNDGFYGISSSGRSPVSGVGFSPSGGPSASPGGGFSGVFSPGSALG
SATSAGGLNSARSSVSSTGPSPRWATSPRNRAFGHSRTRSQGSVADTLED
LSIVDPGPPTLEPLRNVAGVGGPLRSPRDRWRGPPPDRRNSEIILPLPDR
TQSDPSPGPATDGMRRSFTASLFDQPGGGGRTRPGVPGVSKDDMDTGDGS
GGGGVGASDAGNVALGGPGLGSVGAGDRWG
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