mRNA_H-paniculata_contig2.5109.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2.5109.1 vs. uniprot
Match: D7FKG3_ECTSI (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKG3_ECTSI) HSP 1 Score: 659 bits (1700), Expect = 1.300e-225 Identity = 386/705 (54.75%), Postives = 447/705 (63.40%), Query Frame = 2
Query: 149 AEAKVRMLTWNINGLRKVAASHGGLGPLLDQFEADIVCFQEIKITRAGLVEQGLARAQGYHCFFAHCQVQRKSSYSGVATFVRSGSGLRTLACTTSLGDAHFFGSPGTIAGE--FSPERLVEIDAEGRVLVTDHGHFMLFNVYAPCIRCALFDEDEKTEERRSFKLDFLALLESRISEAQERGRGVVLVGDLNACATQLDHGYFIPDSEFLASQWSKWIRGILGLDSSDSPRLVDCFRRLQPDRQAAFTCWNTQTGARENNYGTRIDYIIADTDLSDRALRSCDIMPSFLGSDHCPVRADFVLPSAQPPGMTITNGPRCRVNKGGGNXXXXXAAVVSADSSKTPEWPEHPPECSCFYRELKGKQEKLATYFVTGATNESGP--TEASCYN----QNGEGVKEAERSRYEVGGVVCAAA---SVFGGGLTGTTRNGMVSSFSRHKPSLKRLASAGR----APSGGKDGKAR---SAGTRQSKLAFASNKQAVGPTTTLVPASITSSSSSEKTVAP-AVETGETRRSHNCTGFLARGLHGDCDRDLDSIFSSSVL------VTAKDGDGKNARCSEGKRT-------HTHQVSREEEVSYASAESSCDGGGSGSRHDSAEAWKAFFGQKKATPPCEHGEPSIQRTVLKQGVNHNRRFYTCARSAGNWPSDQNARCNFFQWRLDGVRGYKDRPPREDSW---KKQRRT 2158
AE + R+LTWNINGLRKVAASHGG+ LLDQF ADIVCFQEIKITRAGLVE LARAQGYH FF HC++ RK SYSGVATFVRS SGL+TLA TTSLGD+ FFGSPG+ GE SP+RL +D+EGRVLVTDHGHF+LFNVYAPC+ + DE EKTE+RR+FK DFLA LE+RI E + RGRGVVLVGDLNACA+QLDHG+ + DSEF AS WSKWIRG+LGL S + PRLVDCFR L PDR++AFTCWNTQTGAR+NNYGTRIDYIIA TD +DRALR+CDIMP FLGSDHCPVRA F P A G+ + A S EWPEHPPECSCFY EL KQEKLA YFV G NE TE + ++G G +E+ +R GG AA ++ G G+TG + S K++ S GR + SGG AR S G+RQSKLAF GP ++ ++S E T +G +RR+ G +S + V A G A G + E V E GGGS DSAEAWKA FG+KK+ P CEHGEPSIQRTVLK G NHNRRFYTCARSAGNWP+D+NARC FFQWR DGVRGYKD+PPR + K+RRT
Sbjct: 20 AEREARILTWNINGLRKVAASHGGVQQLLDQFNADIVCFQEIKITRAGLVEHELARAQGYHGFFNHCKLPRKVSYSGVATFVRSESGLKTLASTTSLGDSAFFGSPGSFVGERRLSPDRLAALDSEGRVLVTDHGHFVLFNVYAPCVSSSSDDEKEKTEDRRAFKRDFLATLEARIFEIRSRGRGVVLVGDLNACASQLDHGFTMTDSEFYASNWSKWIRGMLGLGSPEPPRLVDCFRHLHPDRKSAFTCWNTQTGARDNNYGTRIDYIIAGTDFADRALRACDIMPDFLGSDHCPVRARFAFPLAA--GLAA-------------DAPGESEGDEIARSRSASEWPEHPPECSCFYPELTAKQEKLAKYFVAGGQNEESAVGTEGKGADGRLVRDGNGARESGATRPAAGGGKGVAAFMRALPGAGVTGKDGASVAGSLMMRG---KKVGSVGRTSSTSSSGGGSLTARRPGSGGSRQSKLAF-------GPAANGNVSTSAGATSREATAGGNGAGSGTSRRAEGTVPLRTCNQRGXXXXXXXXAQTSQAIQPPRSRVHASGGGHDTAGAGGGSGSVSTIGSCRLSNPGGEGGVETGPGEGPNGGGGS---RDSAEAWKAIFGRKKSAPTCEHGEPSIQRTVLKPGPNHNRRFYTCARSAGNWPTDRNARCTFFQWRRDGVRGYKDKPPRAEGGTNSNKKRRT 696
BLAST of mRNA_H-paniculata_contig2.5109.1 vs. uniprot
Match: A0A6H5KUC8_9PHAE (DNA-(apurinic or apyrimidinic site) endonuclease 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUC8_9PHAE) HSP 1 Score: 588 bits (1517), Expect = 6.560e-198 Identity = 362/720 (50.28%), Postives = 427/720 (59.31%), Query Frame = 2
Query: 149 AEAKVRMLTWNINGLRKVAASHGGLGPLLDQFEADIVCFQEIKITRAGLVEQGLARAQGYHCFFAHCQVQRKSSYSGVATFVRSGSGLRTLACTTSLGDAHFFGSPGTIAGE--FSPERLVEIDAEGRVLVTDHGHFMLFNVYAPCIRCALF--------------DEDEKTEERRSFKLDFLALLESRISEAQERGRGVVLVGDLNACATQLDHGYFIPDSEFLASQWSKWIRGILGLDSSDSPRLVDCFRRLQPDRQAAFTCWNTQTGARENNYGTRIDYIIADTDLSDRALRSCDIMPSFLGSDHCPVRADFVLP-----SAQPPGMTITNGPRCRVNKGGGNXXXXXAAVVSADSSKTPEWPEHPPECSCFYRELKGKQEKLATYFVTGATNES--------GPTEASCYNQNGEGVKEAER-SRYEVGGVVCAAASVFGGGLTGTTRNGMVSSFSRHKPSLKRLASAGRAPSGGKDG-------KARSAGTRQSKLAFASNKQAVGPTTTLVPASITSSSSSEKTVAPAVETGE---TRRSHNCTGFLARGLH---GDCDRDLDSIFSSSVLVTAKDGDGKNARCSEGKRT----HTHQVSREEEVSYASAESSCDGGGSGSRHDSAEAWKAFFGQKKATPPCEHGEPSIQRTVLKQGVNHNRRFYTCARSAGNWPSDQNARCNFFQWRLDGVRGYKDRPPREDSWK---KQRRT 2158
AE + R+LTWNINGLRKVAASHGG+ LLDQF ADIVCFQEIKITRAGLVE LARAQGYH FF HC++ RK SYSGVATFVRS SGL+T+A TTS GD+ FFGSPG+ GE SP+RL +D+EGRVLVTDHGHF+LFNVYAPCIR + ED ++ ++ L R + R R VGDLNACA+QLDHG+ + DSEF AS WSKWIRG+LGL S + PRLVDCFR L PDR+ AFTCWNTQTGAR+NNYGTRIDYIIA TD +DRALR+CDIMP FLGSDHCPVRA F P +A PG + + A S E PEHPPECSCFY EL KQEKLA YFV G NE G + ++NG G R + GVV ++ G G+TG G+ S K++ SAGR + S G+RQSKLAF GP + ++++S+ + APA GE TRR L G G + +I V A G A + + ++S+ S G+G DSAEAWKA FG+KK+ P CEHGEPSIQRTVLK G NHNRRFYTCARSAGNWP+D+NARC FFQWR DGVRGYKD+PPR + K+RRT
Sbjct: 20 AEREARILTWNINGLRKVAASHGGVKQLLDQFNADIVCFQEIKITRAGLVEHELARAQGYHGFFHHCKLPRKVSYSGVATFVRSESGLKTVASTTSFGDSAFFGSPGSFVGERRLSPDRLAALDSEGRVLVTDHGHFVLFNVYAPCIRPPVLLVVLPVQLQLRRREGEDGRSPGLQARFLGHAGSAHPRDPKPWARSRAGE-VGDLNACASQLDHGFTMTDSEFYASNWSKWIRGMLGLGSPEPPRLVDCFRHLHPDRKGAFTCWNTQTGARDNNYGTRIDYIIAGTDFADRALRACDIMPDFLGSDHCPVRARFAFPLAVGLAADAPGKSEGD--------------------EIARSRSESELPEHPPECSCFYPELTAKQEKLAKYFVAGGQNEESAVGTEGKGAYDRLIGDRNGAGASGVTRPAAGGRRGVVAFMRALPGTGVTGKDGAGVAGSLMMR---AKKVGSAGRTSXXXXXXXXXXXXXRPGSGGSRQSKLAF-------GP---VANDNVSTSAGAASREAPAGGRGEVSGTRRRAEGAVPLRTGNERAGGGGAQTSQAIQPPRSTVHASGGGHDTAGAXXXXXSVSTIGSSRISKPXXXXXVDTGSGEGPNGAGGSRDSAEAWKAIFGRKKSAPTCEHGEPSIQRTVLKPGPNHNRRFYTCARSAGNWPTDRNARCTFFQWRRDGVRGYKDKPPRAEGGSNNIKKRRT 705
BLAST of mRNA_H-paniculata_contig2.5109.1 vs. uniprot
Match: A0A835ZDF2_9STRA (DNA-(apurinic or apyrimidinic site) endonuclease 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDF2_9STRA) HSP 1 Score: 233 bits (595), Expect = 1.250e-62 Identity = 218/725 (30.07%), Postives = 286/725 (39.45%), Query Frame = 2
Query: 230 LLDQFEADI--VCFQEIKITRAGLVEQGLARAQGYHCFFAHCQVQRKSSYSGVATFVRSGSGLRTLACTTSLGDAHFFGS---PGTIAGEFSPERLVEIDAEGRVLVTDHGHFMLFNVYAPCIRCALFDEDEKTEERRSFKLDFLALLESRISEAQERGRGVVLVGDLNACATQLDHGYFIPDSEFLASQWSKWIRGILG--LDSS---------DSPRL--------------------------------------------VDCFRRLQPDRQAAFTCWNTQTGARENNYGTRIDYIIADTDLSDRALRSCDIMPSFLGSDHCPVRADFVLPSAQPPGMTITNGPRCRVNKGGGNXXXXXAAVVSADSSKTPEWPEHPPECSCFYRELKGKQEKLATYFVTGATNESGPTEASCYNQNGEGVKEAERSRYEVGGVVCAAASVFGGGLTGTTRNGMVSSFSRHK-------PSLKRLASAGRAP------SGGKDGKARSAGTRQSKLAFASNKQAVGPTTTLVPASITSSSSSEKTVAPAVETGETRRSHNCTGFLA----RGLHGDCDRDLDSIFSSSVLVTAKDGDGKNARCSEGKRTHTHQVSREEEVSYASAESSCDGGGSGSRH------DSAEAWKAFFGQKKATPPCE-HGEPSIQRTVLKQGVNHNRRFYTCARSAGNWPSDQNARCNFFQWRLDGVRGYKDRPPREDSWKKQR 2152
LL Q +DI CFQE+K + L + LA+A G+H FF+ +YSGVATFVR+G + T + L D FFG P + GE R +D EGRV+ TDH F+LFNVYAPC+ ++ + EERR FK DF A LE+R + GR VVL GDLNACA+ DH + + +++FLAS WS+WIR +LG L+S+ DS L VDCFRR P + AFTCWNT+ GAR NNYGTRIDY++A + ALR+ I P +GSDHCPV A F P A AA +A HPP+CSCF + KL +F N A S + + C AA + + F + P + R + AP GG +G R+ G + G T+ + G A DG GS + D+ AW+A K+ P C H EP+++RTVLK G N RRFY CAR G+WP D NARCN+F++R G RGY+ D + +R
Sbjct: 31 LLAQLGSDIHIYCFQEVKQPKRSLPPE-LAKAPGFHAFFS----LSTKAYSGVATFVRAG--VATASAAAGLADDAFFGGAPLPPPLRGE----RAAALDREGRVVATDHVDFVLFNVYAPCVSG---EDAARAEERRHFKRDFNAALEARARQLVRAGRHVVLAGDLNACASPRDHCFAMSEADFLASPWSRWIRRMLGRSLESAAADGDDGDGDSYALSNGASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVDCFRRANPAAERAFTCWNTKKGARANNYGTRIDYVLASAAFARAALRASAIWPHVVGSDHCPVVATFDAPRAH-------------------------AAAAAAP---------HPPQCSCFLAAVAVP--KLTAFFAPTRVRSGXXXXXXXXXDN------ASDSASQPPELACEAAEEDSTLSCEALFDVPAARFVQEPQDPILPPPCIPRAGATAVAPFFSGSSGGGANGVPRAQGFTTXXXXXXXXXXXXXXXXXXXX---------XXXXXXXXKRGMTQMTLKAFGAAAPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRGSDASRAGSSGVDAKSAWQALLA-KRPPPVCSGHREPAVERTVLKAGPNQGRRFYCCARGEGDWPKDPNARCNYFEFRESGARGYRADARARDQQRAKR 689
BLAST of mRNA_H-paniculata_contig2.5109.1 vs. uniprot
Match: A0A5D6XGU0_9STRA (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XGU0_9STRA) HSP 1 Score: 209 bits (533), Expect = 2.900e-55 Identity = 126/314 (40.13%), Postives = 172/314 (54.78%), Query Frame = 2
Query: 161 VRMLTWNINGLRKVAASHGG-LGPLLDQFEADIVCFQEIKITRAGLVEQGLARAQGYHCFFAHCQVQRKSSYSGVATFVRSG-------SGLRTLACTTSLGDAHFFGSPGTIAGEFSPERLVEIDAEGRVLVTDHGHFMLFNVYAPCIRCALFDEDEKTEERRSFKLDFLALLESRISEAQERGRGVVLVGDLNACATQLDHGYFIPDSE--FLASQWSKWIRGIL-------------GLDSSDSPRLVDCFRRLQPDRQAAFTCWNTQTGARENNYGTRIDYIIADTDLSDRALRSCDIMPSFLGSDHCPV 1033
+R++TWNINGLR V L +L+ +AD+VCFQE K+TR+ L E+ L R +G+ F++ C+V + YSGV TFVR+G GL T A T H G + EF P+ + E++AEGR ++TDH F+L NVY P +R ER FKL F LL+ R+ Q G+ VV+VGD+N ++DH E F +W+ +L LD + RLVD FR P A+TCWNT+TGAR+ N+GTRIDYI+ D +L ++ C + P LGSDHCPV
Sbjct: 12 LRVMTWNINGLRAVLQREKTKLAAMLEDLDADVVCFQETKLTRSELDEE-LVRVEGFDAFYSFCRV--RGGYSGVVTFVRTGIPTPRAEEGL-TGAWKTETSVGHV----GDLHREFEPKLVSELEAEGRCVITDHEAFVLLNVYCPAVR---------NSERLEFKLAFHQLLQDRVRALQRAGKFVVVVGDINIAHREIDHCEPSASEELAFGDHPCRRWMDAVLYDVDVRRDSLQGIPLDEREPGRLVDSFRYFHPLEAKAYTCWNTKTGARQTNFGTRIDYILVDPELMSSSVTDCVLQPDRLGSDHCPV 308
BLAST of mRNA_H-paniculata_contig2.5109.1 vs. uniprot
Match: A0A8K1CH33_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CH33_PYTOL) HSP 1 Score: 202 bits (514), Expect = 5.580e-53 Identity = 135/396 (34.09%), Postives = 192/396 (48.48%), Query Frame = 2
Query: 161 VRMLTWNINGLRKVAASHG--GLGPLLDQFEADIVCFQEIKITRAGLVEQGLARAQGYHCFFAHCQVQRKSSYSGVATFVRSGSGLRTLACTTSLGDA----HFFGSPGTIAGEFSPERLVEIDAEGRVLVTDHGHFMLFNVYAPCIRCALFDEDEKTEERRSFKLDFLALLESRISEAQERGRGVVLVGDLNACATQLDHGYFIP--DSEFLASQWSKWIRGILGLDSSDSPR-------LVDCFRRLQPDRQAAFTCWNTQTGARENNYGTRIDYIIADTDLSDRALRSCDIMPSFLGSDHCPVRADFVLPSAQPPGMTITNGPRCRVNKGGGNXXXXXAAVVSADSSKTPEWPEHPPECSCFYRELKGKQEKLATYFVTGATNESGPTEASCY 1303
VR++TWN+NGLR + + LLD + +I CFQE K+TR+ + E+ L R GY F++ +V +S YSGV TF ++G + T+A L G GT E S + L E+++EGR ++TDH F+L NVY P + A +R +KL F LL R++ Q GR VV+VGD+N ++DH P D F +W+ ++ + D P+ LVD FR P R AFTCWN T AR+ NYGTRIDYI+ D +L D ++ SC+I P GSDHCPV + V+ + +KT C+ FY E GKQ+ + +YF +E S +
Sbjct: 5 VRLMTWNVNGLRAILQREKKRNVQELLDGLDVEIACFQETKLTRSEMDEE-LVRPAGYDAFYSFSKV--RSGYSGVVTFCKTGV-VPTIAAEEGLTGMWKVDDSVGHVGTAHLELSAKLLNELESEGRCVITDHQAFVLLNVYCPALASA---------DRLEYKLAFHELLHDRVAALQRAGRRVVVVGDINISHKEIDHCDPSPYHDGAFGDHPCRQWMDRVVVPNDPDQPQQEHKAGQLVDSFRHFHPTRTKAFTCWNMVTAARQTNYGTRIDYILVDPELMDDSVVSCEIEPERTGSDHCPVVSKLVV----------------------------QFDLDGEAGAKTASL------CARFYAEFSGKQQTIKSYFAQPTADEDNQASESRF 353
BLAST of mRNA_H-paniculata_contig2.5109.1 vs. uniprot
Match: A0A6P4ZDA2_BRABE (DNA-(apurinic or apyrimidinic site) endonuclease n=3 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4ZDA2_BRABE) HSP 1 Score: 202 bits (515), Expect = 2.670e-52 Identity = 198/713 (27.77%), Postives = 294/713 (41.23%), Query Frame = 2
Query: 161 VRMLTWNINGLRKVAASHGGLGPLLDQFEADIVCFQEIKITRAGLVEQGLARAQGYHCFFAHCQVQRKSSYSGVATFVRSGS-------GLRTLACTTSLGDAHFFGSPGTIAGEFSPERLVEIDAEGRVLVTDHGH---------FMLFNVYAPCIRCALFDEDEKTEERRSFKLDFLALLESRISEAQERGRGVVLVGDLNACATQLDHGYFIPDSEFLASQ-WSKWIRGIL------------------------GLDSS-------------DSPRLVDCFRRLQPDRQAAFTCWNTQTGARENNYGTRIDYIIADTDLSDRALRSCDIMPSFLGSDHCPVRADFVLPSAQPPGMTITNGPRCRVNKGGGNXXXXXAAVVSADSSKTPEWPEHPPECSCFYRELKGKQEKLATYFVTGATNESGPTEAS-----CYNQNGEGVKEAERSRYEVGGVVCAAASVF--GGGLTGTTRNGMVSSFSRHKPSLKRLASAGRAPSGGKDGKARS-AGTRQSKLAFASNKQAVGPTTTLVPASITSSSSSEKTVAPAVETGETRRSHNCTGFLARGLHGDCDRDL--------DSIFSSSVLVTAKDGDGKNARCSEGKRTHTHQVSREEEVSYASAESSCDGGGSGSRHDSAEAWKAFFGQKKATPPCE-HGEPSIQRTVLKQGVNHNRRFYTCARSAGNWPSDQNARCNFFQW 2086
+R+LTWNING+R A+ L +LD +ADIVC QE K+TR L ++ A +GY +F+ + +S YSGVAT+ + G+ GL L T+ +A G G F+ E L +D EGR ++T H + NVY P D + EER+ FKL F LL++R + G V+++GD+N +DH D E+ + KW+ L LD+S VD FR P +++AFTCW+T TGAR+ NYGTRIDYI A+ D ++ + C IMP GSDHCPVR + T+ +C P CS + E GKQ+KL+ +F E G ++S + +G E+E + + + S+ G + TT+ S+ + S+KR AS P+G K ++ G + + L+F K V ETG+ RR N + D D S+ SS+ V + D K ++ +E ++ ++ + ++ WK PC+ H EP + RTV KQG N ++FY CAR G+ S+ ARC+ FQW
Sbjct: 1 MRILTWNINGVR---ATKAPLKQVLDSLDADIVCLQETKVTRDQL-DEASAIVEGYSSYFSFSRA--RSGYSGVATYCKDGAMPIKAEEGLTGLL--TNQREADIIGYYGDQT-MFTEEELRSLDKEGRAVITQHAICETNGKECLLAVINVYCP-------RADPEKEERKDFKLRFYRLLQARAQALLQAGSHVIVLGDVNTSHRPIDHCDPDDDIEYFSENPGRKWLDQFLFDPHQTEDSGGTLNPNNQSDASSGQLDTSLNSGIQNASEKEPTGGHFVDAFRFFHPTQRSAFTCWSTVTGARQTNYGTRIDYIFANRDFLNQ-FQDCTIMPEVEGSDHCPVRGELAC--------TVVPAVKC------------------------------PALCSKYMPEFAGKQQKLSVFFTRVKKGEVGEEKSSQDSVSTSQSSYDGHSESETCSQQSSSQLWESNSIKSEGSSVMSTTKQ------SQSRTSMKRTASD---PAGRNVKKQKTDQGKQGTLLSFFGKKTKV-------------------------ETGD-RRKANMSDIPKENPEADVKEDAVHDNAISNQSVNSSNTTVDSDDSKAKGSKDAENGKSTAETKPKQNQAAF---------------------WKTVLKGPPXXXPCKGHKEPCVLRTVKKQGPNFGKQFYVCARPQGH-ASNPEARCDHFQW 601
BLAST of mRNA_H-paniculata_contig2.5109.1 vs. uniprot
Match: UPI000719CC61 (DNA-(apurinic or apyrimidinic site) lyase 2-like isoform X1 n=2 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719CC61) HSP 1 Score: 200 bits (508), Expect = 1.770e-51 Identity = 198/696 (28.45%), Postives = 293/696 (42.10%), Query Frame = 2
Query: 161 VRMLTWNINGLRKVAASHGGLGPLLDQFEADIVCFQEIKITRAGLVEQGLARAQGYHCFFAHCQVQRKSSYSGVATFVRSG----------SGLRTLACTTSLGDAHFFGSPGTIAGEFSPERLVEIDAEGRVLVTDH---------GHFMLFNVYAPCIRCALFDEDEKTEERRSFKLDFLALLESRISEAQERGRGVVLVGDLNACATQLDHGYFIPDSEFLASQWSKWIRGIL----------GLDSSD----------SPRLVDCFRRLQPDRQAAFTCWNTQTGARENNYGTRIDYIIADTDLSDRALRSCDIMPSFLGSDHCPVRADFVLPSAQPPGMTITNGPRCRVNKGGGNXXXXXAAVVSADSSKTPEWPEHPPECSCFYRELKGKQEKLATYFVTGATNESGPTEASCYNQNGEGVKEAERSRYEVGGVVCAAASVFGGGLTGTTRNGMVSSFSRHKPSLKRLASAGRAPSGGK--------DGKARSAGTRQSKLAFASNKQAV------GPTTTLVPASITSSSSSEKTVAPAVETGETRRSHNCTGFLARGLHGDCDRDLDSIFSSSVLVTAKDGDGKNARCSEGKRTHTHQVSREEEVSYASAESSCDGGGSGSRHDSAEAWKAFFGQKKATPPCE-HGEPSIQRTVLKQGVNHNRRFYTCARSAGNWPSDQNARCNFFQW 2086
+++LTWNING+R A+ L +L+ +ADI+CFQE KITR L+++ A G++ +F+ V +S YSGVAT+ + SGL T S ++G+ +F+ E L +D EGR ++T+H ++ NVY P D + E+R+S+KL F LL+ R GR VV+VGD+N +DH F + KW+ G L G ++D + R VDCFR L P Q AFTCW+T TGAR+ NYGTRIDYI AD L+ AL CD++ GSDHCPV+A F A VV+A++ + C GKQ+KLA +F K ER A A G T R+ S + + + + +G + G + S+L A KQ + G + T+ + S+ +S ++ + G R++ T L + G+C+ + ++ V A GK+ ++ H + + A+A+S A WK P C HGEP + RTV K G N NR+F+ CAR G+ S++ ARC F+W
Sbjct: 6 IKILTWNINGIR---ATKLPLKDVLNDLDADIICFQETKITR-DLLDEATAVVDGFNSYFSFSLV--RSGYSGVATYCKDHVTPVRAENKLSGLLTAGNDASSDTIGYYGN----LEQFTEEELKCLDNEGRAVMTEHKIRGQDGAENSLVVINVYCP-------RADPEREDRKSYKLRFYQLLQIRAEALLNSGRHVVIVGDVNTSHKPIDHCDPAQCKAFASHPGRKWLDGFLWTPEKEGTQPGTTNNDRSCEWPPGVAAKRFVDCFRFLHPTVQGAFTCWSTVTGARQTNYGTRIDYIFADRCLATTALVDCDVLQHVQGSDHCPVKATF------------------------------NADVVAANNCPS----------LCTKYGFSGKQQKLAEFFP----------------------KTHER----------AVAQPLDVGTTAIARDRKPQSKQQSRNPAEHARKKAKIETGKQRTLAGFLLKGAKKLDAVDSSQLTVA--KQIIWKDVLNGGSETITGTRVQSTLTSTRS-----QYGVDTRNNALTNELYFSVRGECNGQ-NGADNADVAAAAAGNRGKDPA------SNVH-CAADAPAPAAAAKSQ------------AAQWKGLLRGPPPPPVCRGHGEPCVLRTVKKSGPNVNRQFFVCARPEGH-KSNKEARCEHFKW 584
BLAST of mRNA_H-paniculata_contig2.5109.1 vs. uniprot
Match: A0A329STD7_9STRA (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329STD7_9STRA) HSP 1 Score: 196 bits (499), Expect = 4.780e-51 Identity = 119/313 (38.02%), Postives = 168/313 (53.67%), Query Frame = 2
Query: 158 KVRMLTWNINGLRKVAAS-HGGLGPLLDQFEADIVCFQEIKITRAGLVEQGLARAQGYHCFFAHCQVQRKSSYSGVATFVRSGSGLRTLAC----TTSLGDAHFFGSPGTIAGEFSPERLVEIDAEGRVLVTDHGHFMLFNVYAPCIRCALFDEDEKTEERRSFKLDFLALLESRISEAQERGRGVVLVGDLNACATQLDH----GYFIPDSEFLASQWSKWIRGILGL------------DSSDSPRLVDCFRRLQPDRQAAFTCWNTQTGARENNYGTRIDYIIADTDLSDRALRSCDIMPSFLGSDHCPV 1033
+++++TWN+NGLR V L L+ EADI+C QE K+TR+ L E+ L R G+ F++ C+ + YSGV TFV+S L T+A T L G G++ E + + ++DAEGR ++TDH F+L N Y P + A +R +KL F ALLE R+S Q + V++VGD+N ++DH + S F KW+ +G+ D D +L+D +R PD+ AFTCWNTQTGAR+ NYG RIDYI+ D + + SC I LGSDHCPV
Sbjct: 4 ELQLVTWNVNGLRAVLQRLEQSLHQFLESLEADIICLQETKMTRSELDEE-LVRPPGFDAFYSFCR--HRGGYSGVVTFVKSD--LPTVAAEEGLTGLLRTKDSVGHVGSLHDELPSKLVNDLDAEGRCIITDHQAFVLLNTYCPALASA---------DRLEYKLQFHALLEDRVSALQAANKRVIVVGDINIAHREIDHCDPHAHRSDGSSFGDHPCRKWMDSFVGVSEEISLSEPKSEDIVDGAKLIDTYRYFHPDQAKAFTCWNTQTGARQTNYGARIDYILVDPTFVE-FVSSCSIDAERLGSDHCPV 301
BLAST of mRNA_H-paniculata_contig2.5109.1 vs. uniprot
Match: R7UJL9_CAPTE (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Capitella teleta TaxID=283909 RepID=R7UJL9_CAPTE) HSP 1 Score: 196 bits (498), Expect = 5.190e-51 Identity = 130/393 (33.08%), Postives = 197/393 (50.13%), Query Frame = 2
Query: 161 VRMLTWNINGLRKVAASHGGLGPLLDQFEADIVCFQEIKITRAGLVEQGLARAQGYHCFFAHCQVQRKSSYSGVATFVRSG-SGLRTLACTTSLGDA----HFFGSPGTIAGEFSPERLVEIDAEGRVLVTDHG---------HFMLFNVYAPCIRCALFDEDEKTEERRSFKLDFLALLESRISEAQERGRGVVLVGDLNACATQLDHGYFIPDSEFLASQWSKWIRGILGLDSSDSPRLVDCFRRLQPDRQAAFTCWNTQTGARENNYGTRIDYIIADTDLSDRALRSCDIMPSFLGSDHCPVRADFVLPSAQPPGMTITNGPRCRVNKGGGNXXXXXAAVVSADSSKTPEWPEHPPECSCFYRELKGKQEKLATYFVTGATNESGPTEAS 1297
+++LTWNING+R AS L L + +ADI+C QE KITR ++++ A +G++ +F+ C+ +S YSGVAT+V++ + + T + +A H G G + ++ + + +D EGR ++T H + NVY P A+ D+ + E R +FKL F LL+ R + G V+++GD+NA +DH + EF KW+ +L ++ + VD FR PD++ A+TCW T TGAR NYGTRIDYII DT L + + C I+P GSDHCPV+A C K ++PP CS + E GKQ+KL++YF G+ +SG +S
Sbjct: 1 MKILTWNINGIR---ASKVPLPQLFETLDADIICIQETKITR-DMLDEATAIVEGFNAYFSFCKT--RSGYSGVATYVKNSCTPTKAEEGLTGVHEADKAEHSIGFHGDYS-LYTEDEIRSLDNEGRCIMTQHKMLSDDGEEIRLTVINVYCPM---AVLDDPDSVE-RMAFKLKFYDLLQKRAEAILQSGSHVIILGDVNASHRPIDHCDPCDEKEFNQHPSRKWLNNLLRTPTNSNGLFVDSFRHFHPDQREAYTCWQTLTGARATNYGTRIDYIIGDTRLVEDSFSDCVILPDVRGSDHCPVKAVLHW--------------ECIPAK------------------------KYPPLCSKYLPEFVGKQQKLSSYFSKGSGPKSGSDTSS 344
BLAST of mRNA_H-paniculata_contig2.5109.1 vs. uniprot
Match: A0A4P9WK69_9FUNG (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9WK69_9FUNG) HSP 1 Score: 197 bits (502), Expect = 1.280e-50 Identity = 126/315 (40.00%), Postives = 169/315 (53.65%), Query Frame = 2
Query: 161 VRMLTWNINGLRKVAA-----SHGGLGPLLDQFEADIVCFQEIKITRA---GLVEQGLARAQGYHCFFAHCQVQRKSSYSGVATFVRSG----------SGLRTLACTTSLGDAHFFGSPGTIAGEFSPERLVEIDAEGRVLVTDHGHFMLFNVYAPCIRCALFDEDEKTEERRSFKLDFLALLESRISEAQERGRGVVLVGDLNACATQLDHGYFIPDSEFLASQWSKWIRGILG--LDSSDSPR--LVDCFRRLQPDRQAAFTCWNTQTGARENNYGTRIDYIIADTDLSDRALRSCDIMPSFLGSDHCPVRA 1039
+++LTWN+NG+R + L LLD ADI+CFQE K + A + LA G+ FF+ + Q+ YSGVATFVRS SGL L+ + A F G + EF+ LV++D+EGR +VTDH F+LFNVY P + ++ER +FK+ F +E R + E GR V++VGD+N C ++DH P + + + W LDS PR VD FR PDR+AAFTCWNT AR N+GTRIDYI+ D L CDI+P+ +GSDHCPV A
Sbjct: 1 MKILTWNVNGVRTLRQYAPWNELKSLKALLDSLGADIICFQETKASIAISRSQADGDLALVPGFDAFFSFSRKQQ--GYSGVATFVRSEYAPIDAEEGFSGL--LSQPSESNPAPSFRCYGELFSEFTRPELVDLDSEGRCIVTDHRSFVLFNVYFP---------NAGSDERFAFKMRFYKAIELRANALIEAGRQVIIVGDVNTCHREIDH--CDPKTAIAEREHTSWDENPAAQWLDSMLMPRGPFVDSFRWFHPDRKAAFTCWNTLINARPANFGTRIDYILVSDDFHSLWLEGCDILPNIMGSDHCPVMA 300 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2.5109.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2.5109.1 >prot_H-paniculata_contig2.5109.1 ID=prot_H-paniculata_contig2.5109.1|Name=mRNA_H-paniculata_contig2.5109.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=692bp MSGIESTQVLGDDKVVSCEQIAEAKVRMLTWNINGLRKVAASHGGLGPLLback to top mRNA from alignment at H-paniculata_contig2:15920..20724- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2.5109.1 ID=mRNA_H-paniculata_contig2.5109.1|Name=mRNA_H-paniculata_contig2.5109.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4805bp|location=Sequence derived from alignment at H-paniculata_contig2:15920..20724- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2:15920..20724- >mRNA_H-paniculata_contig2.5109.1 ID=mRNA_H-paniculata_contig2.5109.1|Name=mRNA_H-paniculata_contig2.5109.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4152bp|location=Sequence derived from alignment at H-paniculata_contig2:15920..20724- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |