prot_H-paniculata_contig2.5108.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2.5108.1
Unique Nameprot_H-paniculata_contig2.5108.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length177
Homology
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BLAST of mRNA_H-paniculata_contig2.5108.1 vs. uniprot
Match: D7FKG2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKG2_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 2.470e-35
Identity = 66/106 (62.26%), Postives = 84/106 (79.25%), Query Frame = 0 
Query:   71 PNEYDTFFNNASKSGQAVIKNLDPEERARRAMEGEKLEDDIMEIATVLREKADEMVARTGSIDFAIIQPMIDEIQVLKGRYRLVVGATVAEDAESSVERKDADEPS 176
            PNEY+ FFN AS+ G    ++L PEERA+RAMEGEKLED+I+EIATVLREKADEMVA TG+I+F IIQPMIDEI VLK +Y++V+GAT   D + + +  D ++ S
Sbjct:    2 PNEYEAFFNKASRLGADATRDLAPEERAQRAMEGEKLEDEIIEIATVLREKADEMVAETGAINFEIIQPMIDEIAVLKSKYKVVMGATETADGDGAPDADDGEDAS 107
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2.5108.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FKG2_ECTSI2.470e-3562.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 25..176
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..24
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.581
NoneNo IPR availableTMHMMTMhelixcoord: 5..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2contigH-paniculata_contig2:12596..14681 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2.5108.1mRNA_H-paniculata_contig2.5108.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2 12020..14781 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2.5108.1 ID=prot_H-paniculata_contig2.5108.1|Name=mRNA_H-paniculata_contig2.5108.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=177bp
MLKVSLLYACIIFPGMTGAFHVGWTSRGGPRLLSSRPPQHSMTGEKRGEA
WRSCSTWHRARAAPRPLRAFPNEYDTFFNNASKSGQAVIKNLDPEERARR
AMEGEKLEDDIMEIATVLREKADEMVARTGSIDFAIIQPMIDEIQVLKGR
YRLVVGATVAEDAESSVERKDADEPS*
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