prot_H-paniculata_contig1996.5098.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1996.5098.1
Unique Nameprot_H-paniculata_contig1996.5098.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length162
Homology
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BLAST of mRNA_H-paniculata_contig1996.5098.1 vs. uniprot
Match: D7FID4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FID4_ECTSI)

HSP 1 Score: 145 bits (367), Expect = 8.100e-42
Identity = 81/161 (50.31%), Postives = 101/161 (62.73%), Query Frame = 0 
Query:    1 MDESAIFRILRQFRKVRGPDFHQPAIRGGRTKQLGCGDGAAPGDSDGGIAKRHPLSKEERAEVEKALTSCTPNSGAARGDAAKDGLASDETVGSEGEARAAQMDLVAAVDFFNTFDAWIDSKYPGDRGSATKVKVAFRKQHRALVANLCLEDIEDIAQAMQ 161
            M+E+++ R LRQ+RKVRGPDFHQPA R  + K           + +GG+ KR PL+KEERAE EK L       G     A           G+  +A   + DL+  V+F   FDAW+D KYPGDRG +TKVKVAFRKQHRA+V+ L LEDIE+IAQAMQ
Sbjct:    1 MNEASLLRALRQYRKVRGPDFHQPATRSNQGKIE---------NGNGGVEKRQPLTKEERAEAEKVLAEAAAAGGGGLESAHTQQALPGGDAGAGADADTTRPDLIDPVEFLKEFDAWVDGKYPGDRGRSTKVKVAFRKQHRAVVSKLNLEDIEEIAQAMQ 152
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BLAST of mRNA_H-paniculata_contig1996.5098.1 vs. uniprot
Match: A0A836CKU6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKU6_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 3.920e-18
Identity = 60/159 (37.74%), Postives = 87/159 (54.72%), Query Frame = 0 
Query:    2 DESAIFRILRQFRKVRGPDFHQPAIRGGRTKQLGCGDGAAPGDSDGGIAKRHPLSKEERAEVEKALTSCTPNSGAARGDAAKDGLASDETVGSEGEARAAQMDLVAAVDFFNTFDAWIDSKYPGDRGSATKVKVAFRKQHRALVANLCLEDIEDIAQAM 160
            DE++  R L ++ K+R  DF+ P     ++  +     A    S    AKR PL+ EERA  ++A  +   NS  A           D + G    A AA      + DF   FDAW+DS++P DR +ATKVKVAFR++H+ LVA+L LE+ E+IA+A+
Sbjct:    5 DEASFMRALSRYPKIRNSDFYLPLEEKPKSLLIAASRDA----SSTATAKRVPLTPEERA-AQEAQRATQANSKGADNSXXXXXXXGDASTGETAGAVAAD-----SADFLKVFDAWVDSQWP-DRATATKVKVAFRREHKRLVASLNLEETEEIAEAL 152
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1996.5098.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FID4_ECTSI8.100e-4250.31Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CKU6_9STRA3.920e-1837.74Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 146..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1996contigH-paniculata_contig1996:7096..10954 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1996.5098.1mRNA_H-paniculata_contig1996.5098.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1996 6840..12245 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1996.5098.1 ID=prot_H-paniculata_contig1996.5098.1|Name=mRNA_H-paniculata_contig1996.5098.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=162bp
MDESAIFRILRQFRKVRGPDFHQPAIRGGRTKQLGCGDGAAPGDSDGGIA
KRHPLSKEERAEVEKALTSCTPNSGAARGDAAKDGLASDETVGSEGEARA
AQMDLVAAVDFFNTFDAWIDSKYPGDRGSATKVKVAFRKQHRALVANLCL
EDIEDIAQAMQ*
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